BLASTX nr result
ID: Rehmannia29_contig00002808
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00002808
(599 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009608920.1| PREDICTED: photosystem I reaction center sub... 97 2e-22
gb|AAF19787.1|AF162201_1 photosystem I subunit III, partial (chl... 97 4e-22
gb|PKI41875.1| hypothetical protein CRG98_037745 [Punica granatum] 96 5e-22
pdb|5L8R|F Chain F, The structure of plant photosystem I super-c... 96 2e-21
ref|WP_082193720.1| hypothetical protein, partial [Burkholderia ... 97 2e-21
ref|XP_019231973.1| PREDICTED: photosystem I reaction center sub... 97 3e-21
ref|NP_001312397.1| photosystem I reaction center subunit III, c... 97 3e-21
ref|XP_021670098.1| photosystem I reaction center subunit III, c... 97 4e-21
ref|XP_011026755.1| PREDICTED: photosystem I reaction center sub... 97 4e-21
ref|XP_002299414.1| photosystem I chain III family protein [Popu... 97 4e-21
ref|XP_024160981.1| photosystem I reaction center subunit III, c... 97 4e-21
ref|XP_023884996.1| photosystem I reaction center subunit III, c... 97 4e-21
ref|XP_002516419.1| PREDICTED: photosystem I reaction center sub... 97 4e-21
gb|PIM99411.1| Photosystem I [Handroanthus impetiginosus] 97 4e-21
ref|XP_022025772.1| photosystem I reaction center subunit III, c... 97 4e-21
ref|XP_016445489.1| PREDICTED: photosystem I reaction center sub... 97 4e-21
ref|XP_023750259.1| photosystem I reaction center subunit III, c... 97 4e-21
ref|XP_019169112.1| PREDICTED: photosystem I reaction center sub... 97 4e-21
ref|XP_019246175.1| PREDICTED: photosystem I reaction center sub... 97 4e-21
ref|XP_015065654.1| PREDICTED: photosystem I reaction center sub... 97 4e-21
>ref|XP_009608920.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Nicotiana tomentosiformis]
Length = 109
Score = 96.7 bits (239), Expect = 2e-22
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 7 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 49
>gb|AAF19787.1|AF162201_1 photosystem I subunit III, partial (chloroplast) [Lactuca sativa]
Length = 140
Score = 96.7 bits (239), Expect = 4e-22
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 38 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 80
>gb|PKI41875.1| hypothetical protein CRG98_037745 [Punica granatum]
Length = 109
Score = 95.5 bits (236), Expect = 5e-22
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCG+DGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 7 RFDNYGKQGLLCGTDGLPHLIVSGDQRHWGEFITPGILFLYIA 49
>pdb|5L8R|F Chain F, The structure of plant photosystem I super-complex at 2.6
angstrom resolution.
Length = 154
Score = 95.5 bits (236), Expect = 2e-21
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCG+DGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 52 RFDNYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGILFLYIA 94
>ref|WP_082193720.1| hypothetical protein, partial [Burkholderia gladioli]
Length = 203
Score = 96.7 bits (239), Expect = 2e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 127 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 169
>ref|XP_019231973.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Nicotiana attenuata]
gb|OIT06637.1| photosystem i reaction center subunit iii, chloroplastic [Nicotiana
attenuata]
Length = 222
Score = 96.7 bits (239), Expect = 3e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 120 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 162
>ref|NP_001312397.1| photosystem I reaction center subunit III, chloroplastic-like
[Nicotiana tabacum]
ref|XP_009780876.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Nicotiana sylvestris]
gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
Length = 222
Score = 96.7 bits (239), Expect = 3e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 120 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 162
>ref|XP_021670098.1| photosystem I reaction center subunit III, chloroplastic-like
[Hevea brasiliensis]
Length = 224
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 122 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 164
>ref|XP_011026755.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Populus euphratica]
ref|XP_011011626.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Populus euphratica]
Length = 224
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 122 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 164
>ref|XP_002299414.1| photosystem I chain III family protein [Populus trichocarpa]
gb|ABK96023.1| unknown [Populus trichocarpa]
gb|PNT53364.1| hypothetical protein POPTR_001G081500v3 [Populus trichocarpa]
gb|PNT53365.1| hypothetical protein POPTR_001G081500v3 [Populus trichocarpa]
gb|PNT53366.1| hypothetical protein POPTR_001G081500v3 [Populus trichocarpa]
Length = 224
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 122 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 164
>ref|XP_024160981.1| photosystem I reaction center subunit III, chloroplastic [Rosa
chinensis]
gb|PRQ29935.1| putative photosystem I [Rosa chinensis]
Length = 225
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 123 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 165
>ref|XP_023884996.1| photosystem I reaction center subunit III, chloroplastic [Quercus
suber]
ref|XP_023884997.1| photosystem I reaction center subunit III, chloroplastic [Quercus
suber]
gb|POE70062.1| photosystem i reaction center subunit iii, chloroplastic [Quercus
suber]
Length = 225
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 123 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 165
>ref|XP_002516419.1| PREDICTED: photosystem I reaction center subunit III, chloroplastic
[Ricinus communis]
gb|EEF45974.1| Photosystem I reaction center subunit III, chloroplast precursor,
putative [Ricinus communis]
Length = 225
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 123 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 165
>gb|PIM99411.1| Photosystem I [Handroanthus impetiginosus]
Length = 226
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 124 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 166
>ref|XP_022025772.1| photosystem I reaction center subunit III, chloroplastic
[Helianthus annuus]
gb|OTF87550.1| putative photosystem I reaction center subunit III protein
[Helianthus annuus]
Length = 227
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 125 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 167
>ref|XP_016445489.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Nicotiana tabacum]
Length = 227
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 125 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 167
>ref|XP_023750259.1| photosystem I reaction center subunit III, chloroplastic [Lactuca
sativa]
gb|PLY99833.1| hypothetical protein LSAT_6X37081 [Lactuca sativa]
Length = 228
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 126 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 168
>ref|XP_019169112.1| PREDICTED: photosystem I reaction center subunit III, chloroplastic
[Ipomoea nil]
Length = 228
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 126 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 168
>ref|XP_019246175.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Nicotiana attenuata]
gb|OIT03827.1| photosystem i reaction center subunit iii, chloroplastic [Nicotiana
attenuata]
Length = 228
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 126 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 168
>ref|XP_015065654.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Solanum pennellii]
Length = 228
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 469 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 597
RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA
Sbjct: 126 RFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIA 168