BLASTX nr result

ID: Rehmannia29_contig00001334 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00001334
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009788034.1| PREDICTED: serine/arginine-rich splicing fac...    56   2e-06

>ref|XP_009788034.1| PREDICTED: serine/arginine-rich splicing factor SR45a isoform X1
           [Nicotiana sylvestris]
          Length = 231

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/52 (57%), Positives = 34/52 (65%)
 Frame = +1

Query: 316 SRRKRARTPTPGHYLGLKNTRGDG*LLLPLLKFIVYYGN*FIAWVKGYRGDR 471
           SRRKR RTPTPGHYLGL++TRGD  LL+            FIA  +GY GDR
Sbjct: 133 SRRKRPRTPTPGHYLGLESTRGDSKLLMLF----------FIALAEGYCGDR 174


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