BLASTX nr result
ID: Rehmannia29_contig00001249
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00001249
(1213 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019190492.1| PREDICTED: uncharacterized protein LOC109184... 45 5e-11
ref|XP_019256520.1| PREDICTED: uncharacterized protein LOC109234... 39 9e-09
ref|XP_019151976.1| PREDICTED: replication protein A 70 kDa DNA-... 38 2e-07
ref|XP_016509422.1| PREDICTED: replication protein A 70 kDa DNA-... 45 9e-07
gb|OIS97375.1| hypothetical protein A4A49_60764, partial [Nicoti... 39 3e-06
ref|XP_016509098.1| PREDICTED: replication protein A 70 kDa DNA-... 47 5e-06
ref|XP_019267591.1| PREDICTED: replication protein A 70 kDa DNA-... 50 5e-06
ref|XP_019193076.1| PREDICTED: replication factor A protein 1-li... 41 8e-06
ref|XP_019191695.1| PREDICTED: replication factor A protein 1-li... 41 8e-06
ref|XP_016475267.1| PREDICTED: replication protein A 70 kDa DNA-... 46 1e-05
ref|XP_016475268.1| PREDICTED: replication protein A 70 kDa DNA-... 46 1e-05
>ref|XP_019190492.1| PREDICTED: uncharacterized protein LOC109184952 [Ipomoea nil]
Length = 582
Score = 45.1 bits (105), Expect(3) = 5e-11
Identities = 19/47 (40%), Positives = 34/47 (72%)
Frame = -2
Query: 735 LPADLKALIGNMMLFNVQIK*EQLRNYVGAFSVVKLTADQDLVWKYS 595
LP +L+ALIG +LF + ++ EQ +NY+ AF V+++ D+ +V K++
Sbjct: 417 LPKELEALIGLNLLFRIAVRKEQFQNYLNAFPVMRIITDEKIVEKHA 463
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -2
Query: 1212 WVCARIIDISDE*WYISCTR---CTKKFHLALDQLYCIKCD 1099
WV ARI+ I D WY + R C KK L L+C CD
Sbjct: 312 WVAARIVFIDDPEWYYASCRTKGCNKKLKLKGKWLWCSTCD 352
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -1
Query: 979 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVEVILFNLV 836
+Y I ++V D +A L WDREC ++G S +L+ +V + ++
Sbjct: 361 RYRIKVRVVDLDGNAPFLLWDRECINLLGISADDLKDTHTKVQNYKMI 408
>ref|XP_019256520.1| PREDICTED: uncharacterized protein LOC109234935 [Nicotiana
attenuata]
Length = 396
Score = 38.5 bits (88), Expect(3) = 9e-09
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = -1
Query: 991 SFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 857
S ++Y + ++V D +A SLL W+RE Q+IG+S EL+ +E
Sbjct: 189 SCTHRYRLQVRVMDGTAFISLLLWNREAMQLIGRSAKELKGSSLE 233
Score = 38.5 bits (88), Expect(3) = 9e-09
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Frame = -2
Query: 756 GSSLSVEL-------PADLKALIGNMMLFNVQIK*EQLRNYVGAFSVVKLTADQDLVWKY 598
GSSL L P++L A++ ++F V +K E + + V + V+KL+ D DL+ +Y
Sbjct: 229 GSSLENSLADADCSYPSELDAILYKKLMFKVIVKQENIESQVEVYKVLKLSDDDDLLKEY 288
Query: 597 SATSLESQV 571
S E +
Sbjct: 289 SHNLFEDNI 297
Score = 32.0 bits (71), Expect(3) = 9e-09
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 1212 WVCARIIDIS-DE*W-YISCTRCTKKFHLALDQLYCIKCDHLQLT 1084
W+ A ++ + D W Y++C +C++K ++ +C KC+ Q +
Sbjct: 145 WIAAELVSLELDRGWSYLACNKCSRKVDKVGNKYFCKKCNEDQFS 189
>ref|XP_019151976.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Ipomoea nil]
Length = 517
Score = 37.7 bits (86), Expect(3) = 2e-07
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -1
Query: 979 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQK 866
+Y I ++V D +A + WDRE +++G S +EL+QK
Sbjct: 341 RYRIKIRVVDIKGNAPFVMWDREYTELLGMSALELKQK 378
Score = 35.4 bits (80), Expect(3) = 2e-07
Identities = 15/53 (28%), Positives = 33/53 (62%)
Frame = -2
Query: 765 KEDGSSLSVELPADLKALIGNMMLFNVQIK*EQLRNYVGAFSVVKLTADQDLV 607
K+ S +PA++++L+G ++F + + EQ N + AFSV+++ D +++
Sbjct: 376 KQKNSQGKNGVPAEIQSLVGLNLIFRIAFRREQFLNLLNAFSVMRIINDVEML 428
Score = 31.2 bits (69), Expect(3) = 2e-07
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -2
Query: 1212 WVCARII--DISDE*WYISCTR--CTKKFHLALDQLYCIKCD 1099
WV ARII D E +Y SC C KK + LYC CD
Sbjct: 291 WVAARIIFIDCDGEWYYPSCRTKSCYKKLEPQKEFLYCKDCD 332
>ref|XP_016509422.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana tabacum]
Length = 430
Score = 45.4 bits (106), Expect(3) = 9e-07
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = -1
Query: 982 NKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVEV 854
++Y + ++V D +A SLL W+RE +Q+IGKS EL++ VE+
Sbjct: 240 HRYRLQVRVMDRTAFISLLLWNREAQQLIGKSAKELKEGLVEI 282
Score = 32.0 bits (71), Expect(3) = 9e-07
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -2
Query: 732 PADLKALIGNMMLFNVQIK*EQLRNYVGAFSVVKLTADQDLVWKYSATSLESQV 571
P++L ++ +F V +K + + A VVK+T D DL +Y+ +S E +
Sbjct: 292 PSELDDILDKKFMFKVIVKQTNIESQDKACKVVKVTDDDDLQKEYAHSSFEDTI 345
Score = 24.6 bits (52), Expect(3) = 9e-07
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 1170 YISCTRCTKKFHLALDQLYCIKCD 1099
++ C +C KK ++ +C KC+
Sbjct: 209 HLGCNKCIKKVEKVGNKFFCKKCN 232
>gb|OIS97375.1| hypothetical protein A4A49_60764, partial [Nicotiana attenuata]
Length = 223
Score = 38.5 bits (88), Expect(3) = 3e-06
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = -1
Query: 991 SFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 857
S ++Y + ++V D +A SLL W+RE Q+IG+S EL+ +E
Sbjct: 27 SCTHRYRLQVRVMDGTAFISLLLWNREAMQLIGRSAKELKGSSLE 71
Score = 38.5 bits (88), Expect(3) = 3e-06
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Frame = -2
Query: 756 GSSLSVEL-------PADLKALIGNMMLFNVQIK*EQLRNYVGAFSVVKLTADQDLVWKY 598
GSSL L P++L A++ ++F V +K E + + V + V+KL+ D DL+ +Y
Sbjct: 67 GSSLENSLADADCSYPSELDAILYKKLMFKVIVKQENIESQVEVYKVLKLSDDDDLLKEY 126
Query: 597 SATSLESQV 571
S E +
Sbjct: 127 SHNLFEDNI 135
Score = 23.1 bits (48), Expect(3) = 3e-06
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = -2
Query: 1164 SCTRCTKKFHLALDQLYCIKCDHLQLT 1084
+C +C++K ++ +C KC+ Q +
Sbjct: 1 ACNKCSRKVDKVGNKYFCKKCNEDQFS 27
>ref|XP_016509098.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X4 [Nicotiana tabacum]
Length = 464
Score = 47.0 bits (110), Expect(2) = 5e-06
Identities = 21/52 (40%), Positives = 36/52 (69%)
Frame = -1
Query: 991 SFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVEVILFNLV 836
S ++Y + ++V D +A SLL W+RE Q+IGKS EL+++ VEV ++ ++
Sbjct: 292 SVTHRYRLQVRVMDGTAFISLLLWNREAMQLIGKSAKELKERLVEVEVYKVL 343
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 1212 WVCARIIDIS-DE*W-YISCTRCTKKFHLALDQLYCIKCD 1099
W+ A+++++ D W Y++C +C++K ++ +C KC+
Sbjct: 248 WIAAKLVNLELDRGWSYLACNKCSRKVEKVGNKYFCAKCN 287
>ref|XP_019267591.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana attenuata]
Length = 412
Score = 50.1 bits (118), Expect(2) = 5e-06
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = -1
Query: 991 SFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVEVIL--FNLVFQIIV 821
SF ++Y + ++V D +A SLL W+RE Q+IGKS EL+++ +EVI+ N+ +Q+ V
Sbjct: 260 SFTHRYRLQVRVMDGTAFISLLLWNREAMQLIGKSAKELKERLLEVIVKQENIEYQVEV 318
Score = 30.4 bits (67), Expect(2) = 5e-06
Identities = 10/40 (25%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 1212 WVCARIIDIS-DE*W-YISCTRCTKKFHLALDQLYCIKCD 1099
W+ A+++++ D W Y++C +C++K ++ +C C+
Sbjct: 216 WIAAKLVNLELDRGWLYLACNKCSRKVDKVGNKYFCKNCN 255
>ref|XP_019193076.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
ref|XP_019175674.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
Length = 355
Score = 40.8 bits (94), Expect(2) = 8e-06
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -1
Query: 979 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQK 866
+Y + ++VAD +A L WDREC Q++G S EL+ +
Sbjct: 185 RYRLKIRVADLEGNAPFLLWDRECNQLLGISVAELKSR 222
Score = 38.9 bits (89), Expect(2) = 8e-06
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = -2
Query: 765 KEDGSSLSVELPADLKALIGNMMLFNVQIK*EQLRNYVGAFSVVKLTADQDLVWKYSATS 586
K S+ + +P++L++L+ MLF V ++ EQ N FSV+++ DQ L+ ++
Sbjct: 220 KSRHSNATQLIPSELQSLVKQCMLFRVVVRKEQFENLDNVFSVMRINTDQRLIQVHAPEL 279
Query: 585 LESQVLFIYFKV 550
L ++ KV
Sbjct: 280 LRIPDKYLSSKV 291
>ref|XP_019191695.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
Length = 342
Score = 40.8 bits (94), Expect(2) = 8e-06
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -1
Query: 979 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQK 866
+Y + ++VAD +A L WDREC Q++G S EL+ +
Sbjct: 172 RYRLKIRVADLEGNAPFLLWDRECNQLLGISVAELKSR 209
Score = 38.9 bits (89), Expect(2) = 8e-06
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = -2
Query: 765 KEDGSSLSVELPADLKALIGNMMLFNVQIK*EQLRNYVGAFSVVKLTADQDLVWKYSATS 586
K S+ + +P++L++L+ MLF V ++ EQ N FSV+++ DQ L+ ++
Sbjct: 207 KSRHSNATQLIPSELQSLVKQCMLFRVVVRKEQFENLDNVFSVMRINTDQRLIQVHAPEL 266
Query: 585 LESQVLFIYFKV 550
L ++ KV
Sbjct: 267 LRIPDKYLSSKV 278
>ref|XP_016475267.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X1 [Nicotiana tabacum]
Length = 545
Score = 45.8 bits (107), Expect(2) = 1e-05
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = -1
Query: 991 SFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 857
SF ++Y + ++V D +A SLL W+RE Q+IGKS EL+++ +E
Sbjct: 337 SFTHRYRLQVRVMDGTAFISLLLWNREAMQLIGKSAKELKERLLE 381
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 11/40 (27%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -2
Query: 1212 WVCARIIDIS-DE*W-YISCTRCTKKFHLALDQLYCIKCD 1099
W+ A+++++ D+ W Y++C +C++K ++ +C KC+
Sbjct: 293 WIAAKLVNLELDQGWSYLACNKCSRKVDKVENKYFCKKCN 332
>ref|XP_016475268.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X2 [Nicotiana tabacum]
Length = 535
Score = 45.8 bits (107), Expect(2) = 1e-05
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = -1
Query: 991 SFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 857
SF ++Y + ++V D +A SLL W+RE Q+IGKS EL+++ +E
Sbjct: 327 SFTHRYRLQVRVMDGTAFISLLLWNREAMQLIGKSAKELKERLLE 371
Score = 33.5 bits (75), Expect(2) = 1e-05
Identities = 11/40 (27%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -2
Query: 1212 WVCARIIDIS-DE*W-YISCTRCTKKFHLALDQLYCIKCD 1099
W+ A+++++ D+ W Y++C +C++K ++ +C KC+
Sbjct: 283 WIAAKLVNLELDQGWSYLACNKCSRKVDKVENKYFCKKCN 322