BLASTX nr result

ID: Rehmannia29_contig00001147 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00001147
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022008720.1| 50S ribosomal protein L13, chloroplastic-lik...   172   2e-51
gb|PIN15940.1| Mitochondrial/chloroplast ribosomal protein L13 [...   171   5e-51
ref|XP_011098188.1| 50S ribosomal protein L13, chloroplastic [Se...   171   5e-51
ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloro...   169   2e-50
ref|NP_001310974.1| 50S ribosomal protein L13, chloroplastic [So...   169   2e-50
ref|XP_023750607.1| 50S ribosomal protein L13, chloroplastic [La...   169   2e-50
dbj|GAV60687.1| Ribosomal_L13 domain-containing protein [Cephalo...   169   2e-50
gb|PHU07449.1| 50S ribosomal protein L13, chloroplastic [Capsicu...   169   4e-50
gb|PHT51673.1| 50S ribosomal protein L13, chloroplastic [Capsicu...   169   4e-50
ref|XP_016541611.1| PREDICTED: 50S ribosomal protein L13, chloro...   169   4e-50
gb|PKI54270.1| hypothetical protein CRG98_025330 [Punica granatum]    164   6e-50
ref|XP_019232818.1| PREDICTED: 50S ribosomal protein L13, chloro...   168   7e-50
ref|XP_016506484.1| PREDICTED: 50S ribosomal protein L13, chloro...   168   7e-50
ref|XP_009786256.1| PREDICTED: 50S ribosomal protein L13, chloro...   168   7e-50
ref|XP_022877334.1| 50S ribosomal protein L13, chloroplastic-lik...   168   9e-50
ref|XP_021999951.1| 50S ribosomal protein L13, chloroplastic-lik...   167   9e-50
ref|XP_021656249.1| 50S ribosomal protein L13, chloroplastic-lik...   168   1e-49
ref|XP_008463780.1| PREDICTED: 50S ribosomal protein L13, chloro...   168   1e-49
ref|XP_010060757.1| PREDICTED: 50S ribosomal protein L13, chloro...   167   1e-49
gb|OTG30075.1| putative ribosomal protein L13 [Helianthus annuus]     167   1e-49

>ref|XP_022008720.1| 50S ribosomal protein L13, chloroplastic-like [Helianthus annuus]
 gb|OTF96983.1| putative ribosomal protein L13 family protein [Helianthus annuus]
          Length = 231

 Score =  172 bits (435), Expect = 2e-51
 Identities = 80/86 (93%), Positives = 84/86 (97%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 146 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVY 205

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQT 161
           TGPDHPH+AQKP++LPIRDKRIQKQT
Sbjct: 206 TGPDHPHQAQKPIDLPIRDKRIQKQT 231


>gb|PIN15940.1| Mitochondrial/chloroplast ribosomal protein L13 [Handroanthus
           impetiginosus]
          Length = 233

 Score =  171 bits (433), Expect = 5e-51
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQKRIPERIIEHAVRGMLPKGRLGR+LF HLKVY
Sbjct: 148 GKKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 207

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQT 161
           TGP+HPHEAQKPVELPIRDKRIQK+T
Sbjct: 208 TGPNHPHEAQKPVELPIRDKRIQKRT 233


>ref|XP_011098188.1| 50S ribosomal protein L13, chloroplastic [Sesamum indicum]
          Length = 234

 Score =  171 bits (433), Expect = 5e-51
 Identities = 81/85 (95%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLF HLKVY
Sbjct: 149 GKKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFNHLKVY 208

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
           TGPDHPH AQKP+ELPIRDKRIQKQ
Sbjct: 209 TGPDHPHAAQKPIELPIRDKRIQKQ 233


>ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
           tuberosum]
          Length = 229

 Score =  169 bits (429), Expect = 2e-50
 Identities = 80/85 (94%), Positives = 83/85 (97%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKR+QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 144 GKKRSQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 203

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 204 KGPEHPHEAQKPVELPIRDKRIQKQ 228


>ref|NP_001310974.1| 50S ribosomal protein L13, chloroplastic [Solanum lycopersicum]
 ref|XP_015061102.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
           pennellii]
          Length = 229

 Score =  169 bits (429), Expect = 2e-50
 Identities = 80/85 (94%), Positives = 83/85 (97%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKR+QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 144 GKKRSQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 203

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 204 KGPEHPHEAQKPVELPIRDKRIQKQ 228


>ref|XP_023750607.1| 50S ribosomal protein L13, chloroplastic [Lactuca sativa]
 gb|PLY95463.1| hypothetical protein LSAT_9X100460 [Lactuca sativa]
          Length = 237

 Score =  169 bits (429), Expect = 2e-50
 Identities = 79/86 (91%), Positives = 83/86 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKR QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 152 GKKRLQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVY 211

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQT 161
            GPDHPH+AQKP++LPIRDKRIQKQT
Sbjct: 212 EGPDHPHQAQKPIDLPIRDKRIQKQT 237


>dbj|GAV60687.1| Ribosomal_L13 domain-containing protein [Cephalotus follicularis]
          Length = 231

 Score =  169 bits (428), Expect = 2e-50
 Identities = 80/84 (95%), Positives = 82/84 (97%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY
Sbjct: 146 GKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 205

Query: 238 TGPDHPHEAQKPVELPIRDKRIQK 167
            GPDHPHEAQKPVELPIRDKRIQK
Sbjct: 206 KGPDHPHEAQKPVELPIRDKRIQK 229


>gb|PHU07449.1| 50S ribosomal protein L13, chloroplastic [Capsicum chinense]
          Length = 239

 Score =  169 bits (427), Expect = 4e-50
 Identities = 80/85 (94%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 154 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 213

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 214 KGPEHPHEAQKPVELPIRDKRIQKQ 238


>gb|PHT51673.1| 50S ribosomal protein L13, chloroplastic [Capsicum baccatum]
          Length = 239

 Score =  169 bits (427), Expect = 4e-50
 Identities = 80/85 (94%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 154 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 213

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 214 KGPEHPHEAQKPVELPIRDKRIQKQ 238


>ref|XP_016541611.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Capsicum
           annuum]
 gb|PHT73050.1| 50S ribosomal protein L13 [Capsicum annuum]
          Length = 239

 Score =  169 bits (427), Expect = 4e-50
 Identities = 80/85 (94%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 154 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 213

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 214 KGPEHPHEAQKPVELPIRDKRIQKQ 238


>gb|PKI54270.1| hypothetical protein CRG98_025330 [Punica granatum]
          Length = 102

 Score =  164 bits (414), Expect = 6e-50
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETF+QLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY
Sbjct: 17  GKKRTQKLYRRHSGRPGGMKVETFNQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 76

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            G DHPHEAQKPVELPIRDKRIQKQ
Sbjct: 77  KGSDHPHEAQKPVELPIRDKRIQKQ 101


>ref|XP_019232818.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Nicotiana
           attenuata]
 gb|OIT27795.1| 50s ribosomal protein l13, chloroplastic [Nicotiana attenuata]
          Length = 241

 Score =  168 bits (426), Expect = 7e-50
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 156 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 215

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKP+ELPIRDKRIQKQ
Sbjct: 216 KGPEHPHEAQKPIELPIRDKRIQKQ 240


>ref|XP_016506484.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Nicotiana
           tabacum]
          Length = 241

 Score =  168 bits (426), Expect = 7e-50
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 156 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 215

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKP+ELPIRDKRIQKQ
Sbjct: 216 KGPEHPHEAQKPIELPIRDKRIQKQ 240


>ref|XP_009786256.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Nicotiana
           sylvestris]
          Length = 241

 Score =  168 bits (426), Expect = 7e-50
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 156 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVY 215

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GP+HPHEAQKP+ELPIRDKRIQKQ
Sbjct: 216 KGPEHPHEAQKPIELPIRDKRIQKQ 240


>ref|XP_022877334.1| 50S ribosomal protein L13, chloroplastic-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022877335.1| 50S ribosomal protein L13, chloroplastic-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 238

 Score =  168 bits (425), Expect = 9e-50
 Identities = 80/85 (94%), Positives = 81/85 (95%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQKRIPERIIEHAVRGMLPKGRLGR+LF HLKVY
Sbjct: 153 GKKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 212

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
           TGP HPHEAQKPVELPIRDKRI KQ
Sbjct: 213 TGPSHPHEAQKPVELPIRDKRITKQ 237


>ref|XP_021999951.1| 50S ribosomal protein L13, chloroplastic-like isoform X1
           [Helianthus annuus]
 gb|OTG00322.1| putative ribosomal protein L13 [Helianthus annuus]
          Length = 216

 Score =  167 bits (423), Expect = 9e-50
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VET DQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVY
Sbjct: 131 GKKRTQKLYRRHSGRPGGMKVETLDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVY 190

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQT 161
           TGPDHPH+AQ P++LPIRDKRIQKQT
Sbjct: 191 TGPDHPHQAQTPIDLPIRDKRIQKQT 216


>ref|XP_021656249.1| 50S ribosomal protein L13, chloroplastic-like [Hevea brasiliensis]
          Length = 255

 Score =  168 bits (426), Expect = 1e-49
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY
Sbjct: 170 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 229

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GPDHPHEAQKP+ELPIRDKRIQKQ
Sbjct: 230 KGPDHPHEAQKPIELPIRDKRIQKQ 254


>ref|XP_008463780.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]
          Length = 248

 Score =  168 bits (425), Expect = 1e-49
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY
Sbjct: 163 GKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 222

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQ 164
            GPDHPHEAQKPVELPIRDKRI K+
Sbjct: 223 KGPDHPHEAQKPVELPIRDKRINKE 247


>ref|XP_010060757.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Eucalyptus
           grandis]
 gb|KCW67611.1| hypothetical protein EUGRSUZ_F01365 [Eucalyptus grandis]
          Length = 240

 Score =  167 bits (424), Expect = 1e-49
 Identities = 78/86 (90%), Positives = 83/86 (96%)
 Frame = -1

Query: 418 GKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVY 239
           GKKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY
Sbjct: 155 GKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 214

Query: 238 TGPDHPHEAQKPVELPIRDKRIQKQT 161
            GP+HPH+AQKP+ELPIRDKRIQKQT
Sbjct: 215 KGPEHPHDAQKPIELPIRDKRIQKQT 240


>gb|OTG30075.1| putative ribosomal protein L13 [Helianthus annuus]
          Length = 241

 Score =  167 bits (424), Expect = 1e-49
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = -1

Query: 415 KKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYT 236
           KK TQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFTHLKVYT
Sbjct: 157 KKETQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYT 216

Query: 235 GPDHPHEAQKPVELPIRDKRIQKQT 161
           GPDHPH+AQKP++LPIRDKRIQKQT
Sbjct: 217 GPDHPHQAQKPIDLPIRDKRIQKQT 241


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