BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00001044
         (1130 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               295   e-109
gb|PKU68428.1| hypothetical protein MA16_Dca021968 [Dendrobium c...   296   e-106
gb|ONL98233.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma...   277   e-100
gb|AQK40715.1| Protein RAE1 [Zea mays]                                277   e-100
gb|AQK40710.1| Protein RAE1 [Zea mays]                                277   e-100
gb|ONM58670.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   278   e-100
gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   277   e-100
gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   277   e-100
gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   277   e-100
gb|ONL94081.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma...   277   e-100
gb|AQK62958.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   277   e-100
gb|AQK78905.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   277   e-100
gb|AQL05851.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   279   e-100
gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   276   e-100
gb|ONM03863.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   277   2e-99
gb|ONM06836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   275   2e-99
gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   276   2e-98
gb|ONM32741.1| hypothetical protein ZEAMMB73_Zm00001d041257 [Zea...   275   4e-98
gb|AQL09133.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   275   5e-98
gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   274   2e-97

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  295 bits (756), Expect(2) = e-109
 Identities = 135/214 (63%), Positives = 171/214 (79%)
 Frame = +2

Query: 80  KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKDR 259
           K R+G+WNIGTLTGK++E+V++M RR I+IMC+QETKWVG KAK L+ +G+KLWYSG  R
Sbjct: 99  KMRLGTWNIGTLTGKSMEVVEVMVRRRINIMCLQETKWVGSKAKDLENSGFKLWYSGTHR 158

Query: 260 TRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKFW 439
           TRNGVGIIVD   +  VV V R GDRI+++KIV+  ELIN++S YAPQVGLD ++K KFW
Sbjct: 159 TRNGVGIIVDKTLVQDVVDVKRVGDRIMAIKIVIRQELINVISAYAPQVGLDTSSKEKFW 218

Query: 440 EDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAYD 619
           EDL  L+Q I Q EK+ IGGDLNGHVG++  +Y   HGG+GF  RN +G  ILDFA+AYD
Sbjct: 219 EDLGDLVQGIAQTEKLFIGGDLNGHVGRETGNYRGFHGGHGFGERNEDGEAILDFAMAYD 278

Query: 620 FIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
             + NTFFKKR+EH+IT+KSG +K+QID+ L RK
Sbjct: 279 LFLANTFFKKREEHVITYKSGSSKTQIDFLLMRK 312



 Score =  130 bits (327), Expect(2) = e-109
 Identities = 62/137 (45%), Positives = 86/137 (62%), Gaps = 1/137 (0%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKINIPRIKWWNLKNIEKRDSF 899
            K DR  CK+CKVIPGES+  QHRLLV+D+ +  +  K K    PR +WWNLK  EK+  F
Sbjct: 312  KGDRITCKDCKVIPGESVANQHRLLVMDVLIKRVRQKNKTWKCPRTRWWNLKE-EKQAIF 370

Query: 900  VKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNG-NKWNKESWWWNQEIQEKVK 1076
             + ++    W  E +A + W+ + + ++K+AKE LG S G     KESWWWN+E+Q KVK
Sbjct: 371  KEKVITQCVWDREGEASQMWDSMASCIRKVAKEVLGESKGFAPHQKESWWWNEEVQTKVK 430

Query: 1077 EKRTSYKVLYSCKNEEN 1127
             K+   K LY  + +EN
Sbjct: 431  AKKECCKALYKDRTDEN 447


>gb|PKU68428.1| hypothetical protein MA16_Dca021968 [Dendrobium catenatum]
          Length = 410

 Score =  296 bits (757), Expect(2) = e-106
 Identities = 139/238 (58%), Positives = 180/238 (75%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIRKYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQET 187
           G V N Q   H  +          K RIG+WNIG+LTGK +EL+DIM  R ++I+CIQET
Sbjct: 37  GAVLNRQGFPHQGRMWAKKLVHDTKIRIGTWNIGSLTGKLMELIDIMIHRKLNILCIQET 96

Query: 188 KWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGN 367
           KWVGEKAK +D+ G+KLWYSG+ RTRNGVG+I+D    D V+ + R GDRI++LKIVV +
Sbjct: 97  KWVGEKAKEIDSLGFKLWYSGRSRTRNGVGVIIDKSLKDNVIKINRIGDRILALKIVVDD 156

Query: 368 ELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERV 547
           +++NI+S YAPQVGLD ++K  FW DLE L+Q+IP  E+V IGGDLNGHVGK+  D++ +
Sbjct: 157 KIVNIISAYAPQVGLDMSSKLNFWNDLEELIQNIPLEERVFIGGDLNGHVGKEVVDFKSI 216

Query: 548 HGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
           HGG+GF + N  G+TILDF +AYDF I NT FKKR+EHLIT+K+G + +QIDYFL RK
Sbjct: 217 HGGHGFGTTNEGGKTILDFCLAYDFSIANTLFKKRNEHLITYKNGCSTTQIDYFLIRK 274



 Score =  120 bits (301), Expect(2) = e-106
 Identities = 63/137 (45%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKINIPRIKWWNLKNIEKRDSF 899
            K +R  CK+CKVIP ESL TQHRLLVLD K+    +K K     RI+W +LKNI  ++ F
Sbjct: 274  KLNRLDCKDCKVIPSESLCTQHRLLVLDFKIKGHKIKNKVKRFSRIRWGHLKNI-NQNIF 332

Query: 900  VKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKVK 1076
            V  +++     V + A+  W  V + +K IAK+ LGVS G   N K SWWWN  +QEK+K
Sbjct: 333  VSKILDLKILSVHEDANVMWEKVASDIKNIAKDVLGVSKGKAPNSKNSWWWNPIVQEKIK 392

Query: 1077 EKRTSYKVLYSCKNEEN 1127
             K+  YK  ++ KN +N
Sbjct: 393  NKKFCYKNWFNFKNSDN 409


>gb|ONL98233.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|AQK53188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  119 bits (298), Expect(2) = e-100
 Identities = 60/139 (43%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQHRL+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHRLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|AQK40715.1| Protein RAE1 [Zea mays]
          Length = 989

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8    GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
            GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 369  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 428

Query: 182  ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
            ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 429  ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 488

Query: 362  GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
            G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 489  GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 548

Query: 542  RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
             VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 549  GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 608

Query: 722  K 724
            +
Sbjct: 609  E 609



 Score =  119 bits (298), Expect(2) = e-100
 Identities = 60/139 (43%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQHRL+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 608  KEDRHACLDCKVIPGECVVTQHRLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 665

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 666  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 725

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 726  KEKKDCYKRLHHDKCAENI 744


>gb|AQK40710.1| Protein RAE1 [Zea mays]
          Length = 988

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8    GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
            GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 368  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 427

Query: 182  ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
            ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 428  ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 487

Query: 362  GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
            G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 488  GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 547

Query: 542  RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
             VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 548  GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 607

Query: 722  K 724
            +
Sbjct: 608  E 608



 Score =  119 bits (298), Expect(2) = e-100
 Identities = 60/139 (43%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQHRL+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 607  KEDRHACLDCKVIPGECVVTQHRLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 664

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 665  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 724

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 725  KEKKDCYKRLHHDKCAENI 743


>gb|ONM58670.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 933

 Score =  278 bits (710), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 176/241 (73%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD++ RR ++I+C+Q
Sbjct: 66  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVVVRRRVNILCVQ 125

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 126 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 185

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 186 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 245

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 246 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 305

Query: 722 K 724
           +
Sbjct: 306 E 306



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 305  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 362

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 363  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 422

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 423  KEKKDCYKRLHHDKCAENI 441


>gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1038

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 66  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 125

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 126 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 185

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 186 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 245

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 246 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 305

Query: 722 K 724
           +
Sbjct: 306 E 306



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 305  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 362

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 363  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 422

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 423  KEKKDCYKRLHHDKCAENI 441


>gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|ONL94081.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|ONM09892.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|ONM36701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|AQK59578.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|AQK62958.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 935

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FRIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|AQK78905.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 685

 Score =  277 bits (708), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 66  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 125

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 126 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 185

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 186 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 245

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 246 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 305

Query: 722 K 724
           +
Sbjct: 306 E 306



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 305  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 362

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 363  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 422

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 423  KEKKDCYKRLHHDKCAENI 441


>gb|AQL05851.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 933

 Score =  279 bits (713), Expect(2) = e-100
 Identities = 129/241 (53%), Positives = 177/241 (73%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K ++  + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 66  GVVKNEQGSLHLPRRVRRVRKLVKPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 125

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 126 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 185

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++SVYAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 186 GDLVLNVISVYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 245

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 246 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGHHTSQIDFVLLRK 305

Query: 722 K 724
           +
Sbjct: 306 E 306



 Score =  115 bits (288), Expect(2) = e-100
 Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 305  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 362

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F + ++E   W  E  A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 363  FKERVIEEGPWAGEGDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 422

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 423  KEKKDCYKRLHHDKCAENI 441


>gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  276 bits (705), Expect(2) = e-100
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQFHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  118 bits (295), Expect(2) = e-100
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|ONM03863.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  277 bits (708), Expect(2) = 2e-99
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  116 bits (290), Expect(2) = 2e-99
 Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKK-INIPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K   + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHSKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|ONM06836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 933

 Score =  275 bits (702), Expect(2) = 2e-99
 Identities = 127/240 (52%), Positives = 174/240 (72%), Gaps = 2/240 (0%)
 Frame = +2

Query: 11  VVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQE 184
           VVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+QE
Sbjct: 67  VVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQE 126

Query: 185 TKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVG 364
           TKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+G
Sbjct: 127 TKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIG 186

Query: 365 NELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYER 544
           + ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E 
Sbjct: 187 DLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEG 246

Query: 545 VHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKK 724
           VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK+
Sbjct: 247 VHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKE 306



 Score =  118 bits (295), Expect(2) = 2e-99
 Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 305  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 362

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 363  FKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 422

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 423  KEKKDCYKRLHHDKCAENI 441


>gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  276 bits (707), Expect(2) = 2e-98
 Identities = 128/241 (53%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVTSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  113 bits (282), Expect(2) = 2e-98
 Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K D   C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDMHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F + ++E   W  E  A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKERVIEEGPWAGEGDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|ONM32741.1| hypothetical protein ZEAMMB73_Zm00001d041257 [Zea mays]
          Length = 532

 Score =  275 bits (702), Expect(2) = 4e-98
 Identities = 127/241 (52%), Positives = 174/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVVKN Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVKNEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V   GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKMVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFFKKR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  114 bits (284), Expect(2) = 4e-98
 Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F + +++   W  E  A+  W  + T ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKERVIKEGPWAGEGDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|AQL09133.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 636

 Score =  275 bits (703), Expect(2) = 5e-98
 Identities = 127/241 (52%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVV+N Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+C+Q
Sbjct: 44  GVVENEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF SRN EG  IL+FA+AYD  I NTFF+KR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGSRNQEGEEILNFALAYDMFIANTFFRKRTSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  113 bits (282), Expect(2) = 5e-98
 Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK +  + +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKGVVAQ-T 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F + ++E   W  E  ++  W  +   ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKERVIEEGPWAEEGDSNIMWRKMAMCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419


>gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  274 bits (701), Expect(2) = 2e-97
 Identities = 127/241 (52%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
 Frame = +2

Query: 8   GVVKNTQEPSHTNKRNTNDNKKIR--KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQ 181
           GVV+N Q   H  +R     K +   + R+GSWN+G+LTGK  E+VD+  RR ++I+CIQ
Sbjct: 44  GVVENEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCIQ 103

Query: 182 ETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVV 361
           ETKW G+KAK ++ TG+KLWY+G    +NGVG+++D    D VV V R GDRII +K+V+
Sbjct: 104 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVI 163

Query: 362 GNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYE 541
           G+ ++N++S YAPQVGL++ +K +FWE LE ++ S+P  EK+ IGGDLNGHVG  +  +E
Sbjct: 164 GDLVLNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFE 223

Query: 542 RVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRK 721
            VHGG+GF +RN EG  IL+FA+AYD  I NTFF+KR  HL+TF SG + SQID+ L RK
Sbjct: 224 GVHGGFGFGTRNQEGEEILNFALAYDMFIANTFFRKRTSHLVTFSSGQHTSQIDFVLLRK 283

Query: 722 K 724
           +
Sbjct: 284 E 284



 Score =  112 bits (279), Expect(2) = 2e-97
 Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
 Frame = +3

Query: 720  KNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN-IPRIKWWNLKNIEKRDS 896
            K DR  C +CKVIPGE + TQH+L+V D +   I L+R K N + R KWW LK  +   +
Sbjct: 283  KEDRHACLDCKVIPGECVVTQHKLVVADFR-FKIRLQRNKHNKVTRTKWWKLKG-DVAQT 340

Query: 897  FVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNKWN-KESWWWNQEIQEKV 1073
            F + ++E   W  E   +  W  +   ++KIA E  G+S GN+   K++WWWN+++Q+ +
Sbjct: 341  FKERVIEEGPWAEEGDINIMWRKMAVCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAI 400

Query: 1074 KEKRTSYKVLYSCKNEENL 1130
            KEK+  YK L+  K  EN+
Sbjct: 401  KEKKDCYKRLHHDKCAENI 419