BLASTX nr result
ID: Rehmannia29_contig00000331
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00000331
(593 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PHT91388.1| Ubiquitin receptor RAD23c [Capsicum annuum] 111 9e-30
gb|PIN21820.1| Nucleotide excision repair factor NEF2, RAD23 com... 119 1e-28
ref|XP_007215515.1| ubiquitin receptor RAD23d [Prunus persica] >... 118 4e-28
ref|XP_008379541.1| PREDICTED: ubiquitin receptor RAD23d-like [M... 118 4e-28
ref|XP_020269018.1| LOW QUALITY PROTEIN: ubiquitin receptor RAD2... 118 5e-28
ref|XP_009357056.1| PREDICTED: ubiquitin receptor RAD23d [Pyrus ... 117 6e-28
ref|XP_008230399.1| PREDICTED: ubiquitin receptor RAD23d [Prunus... 116 2e-27
ref|XP_011021237.1| PREDICTED: ubiquitin receptor RAD23c isoform... 115 2e-27
ref|XP_009607598.1| PREDICTED: ubiquitin receptor RAD23c-like is... 115 2e-27
ref|XP_009781759.1| PREDICTED: ubiquitin receptor RAD23c-like is... 115 2e-27
ref|XP_011097188.1| ubiquitin receptor RAD23c-like [Sesamum indi... 115 3e-27
ref|XP_011021236.1| PREDICTED: ubiquitin receptor RAD23c isoform... 115 3e-27
gb|PNS96398.1| hypothetical protein POPTR_017G114000v3 [Populus ... 115 3e-27
ref|XP_011021233.1| PREDICTED: ubiquitin receptor RAD23c isoform... 115 3e-27
gb|PNS96399.1| hypothetical protein POPTR_017G114000v3 [Populus ... 115 3e-27
ref|XP_009607597.1| PREDICTED: ubiquitin receptor RAD23d-like is... 115 3e-27
ref|XP_006383464.1| ubiquitin family protein [Populus trichocarpa] 115 3e-27
ref|XP_021815731.1| ubiquitin receptor RAD23d-like [Prunus avium] 115 3e-27
ref|XP_016515235.1| PREDICTED: ubiquitin receptor RAD23d-like [N... 115 3e-27
ref|XP_009781758.1| PREDICTED: ubiquitin receptor RAD23d-like is... 115 3e-27
>gb|PHT91388.1| Ubiquitin receptor RAD23c [Capsicum annuum]
Length = 366
Score = 111 bits (277), Expect(2) = 9e-30
Identities = 54/68 (79%), Positives = 56/68 (82%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNPS Q A GPNANPLDLFPQGL N+GSNA AGNLDFLRNSPQFQALRAMVQ
Sbjct: 200 AVNPSAQGAPQPAVPSSGPNANPLDLFPQGLTNVGSNAGAGNLDFLRNSPQFQALRAMVQ 259
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 260 ANPQILQP 267
Score = 47.0 bits (110), Expect(2) = 9e-30
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 260 DVYGEAASNLVAGSNLEATVQQILD 334
DVY +AASNLVAGSNLEATVQQILD
Sbjct: 144 DVYDQAASNLVAGSNLEATVQQILD 168
>gb|PIN21820.1| Nucleotide excision repair factor NEF2, RAD23 component
[Handroanthus impetiginosus]
Length = 384
Score = 119 bits (299), Expect = 1e-28
Identities = 60/68 (88%), Positives = 62/68 (91%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
SVNP TQATQP A S G PNANPLDLFPQG+PN+GSNASAG LDFLRNSPQFQALRAMVQ
Sbjct: 219 SVNPPTQATQPSAPSSG-PNANPLDLFPQGVPNLGSNASAGTLDFLRNSPQFQALRAMVQ 277
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 278 ANPQILQP 285
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKDETTL EN VA+KSF+VIMLSKNK
Sbjct: 45 MLIHQGKVLKDETTLEENKVAEKSFIVIMLSKNK 78
>ref|XP_007215515.1| ubiquitin receptor RAD23d [Prunus persica]
gb|ONI18774.1| hypothetical protein PRUPE_3G238000 [Prunus persica]
Length = 385
Score = 118 bits (295), Expect = 4e-28
Identities = 58/68 (85%), Positives = 61/68 (89%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+ NP QA QPVA +GG PNANPLDLFPQGLPNMG+NA AGNLDFLRNSPQFQALRAMVQ
Sbjct: 219 AANPPAQAPQPVAPTGG-PNANPLDLFPQGLPNMGANAGAGNLDFLRNSPQFQALRAMVQ 277
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 278 ANPQILQP 285
Score = 57.0 bits (136), Expect = 4e-06
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKD TTL EN VA+ SF+VIML+KNK
Sbjct: 45 MLIHQGKVLKDTTTLEENQVAENSFIVIMLTKNK 78
>ref|XP_008379541.1| PREDICTED: ubiquitin receptor RAD23d-like [Malus domestica]
Length = 387
Score = 118 bits (295), Expect = 4e-28
Identities = 58/68 (85%), Positives = 61/68 (89%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+ NP QA QPVA +GG PNANPLDLFPQGLPNMG+NA AGNLDFLRNSPQFQALRAMVQ
Sbjct: 221 AANPPAQAPQPVAPTGG-PNANPLDLFPQGLPNMGANAGAGNLDFLRNSPQFQALRAMVQ 279
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 280 ANPQILQP 287
Score = 56.2 bits (134), Expect = 7e-06
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKD+TTL +NNVA+ SF+VIML+K K
Sbjct: 45 MLIHQGKVLKDDTTLEQNNVAENSFIVIMLTKPK 78
>ref|XP_020269018.1| LOW QUALITY PROTEIN: ubiquitin receptor RAD23d-like [Asparagus
officinalis]
Length = 393
Score = 118 bits (295), Expect = 5e-28
Identities = 58/71 (81%), Positives = 63/71 (88%), Gaps = 3/71 (4%)
Frame = +3
Query: 390 SVNPSTQATQPVAA---SGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRA 560
+VNP TQA+QP A SGGGPNANPLDLFPQGLP+MGSNA GNLDFLRNSPQF+AL+A
Sbjct: 223 AVNPPTQASQPAAPTVPSGGGPNANPLDLFPQGLPSMGSNAGGGNLDFLRNSPQFRALQA 282
Query: 561 MVQANPQILQP 593
MVQANPQILQP
Sbjct: 283 MVQANPQILQP 293
>ref|XP_009357056.1| PREDICTED: ubiquitin receptor RAD23d [Pyrus x bretschneideri]
Length = 391
Score = 117 bits (294), Expect = 6e-28
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+ NP QA QP+A +GG PNANPLDLFPQGLPNMG+NA AGNLDFLRNSPQFQALRAMVQ
Sbjct: 225 AANPPAQAPQPIAPTGG-PNANPLDLFPQGLPNMGANAGAGNLDFLRNSPQFQALRAMVQ 283
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 284 ANPQILQP 291
Score = 56.2 bits (134), Expect = 7e-06
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKD+TTL +NNVA+ SF+VIML+K K
Sbjct: 45 MLIHQGKVLKDDTTLEQNNVAENSFIVIMLTKPK 78
>ref|XP_008230399.1| PREDICTED: ubiquitin receptor RAD23d [Prunus mume]
Length = 385
Score = 116 bits (291), Expect = 2e-27
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+ NP QA QPV +GG PNANPLDLFPQGLPNMG+NA AGNLDFLRNSPQFQALRAMVQ
Sbjct: 219 AANPPAQAPQPVVPTGG-PNANPLDLFPQGLPNMGANAGAGNLDFLRNSPQFQALRAMVQ 277
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 278 ANPQILQP 285
Score = 56.6 bits (135), Expect = 5e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKD TTL EN VA+ SF+V+ML+KNK
Sbjct: 45 MLIHQGKVLKDTTTLEENQVAENSFIVVMLTKNK 78
>ref|XP_011021237.1| PREDICTED: ubiquitin receptor RAD23c isoform X5 [Populus
euphratica]
Length = 364
Score = 115 bits (289), Expect = 2e-27
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA QP A GGPNANPLDLFPQGLP+ GSNA AGNLDFLRNS QFQALRAMVQ
Sbjct: 198 AVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGNLDFLRNSQQFQALRAMVQ 257
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 258 ANPQILQP 265
>ref|XP_009607598.1| PREDICTED: ubiquitin receptor RAD23c-like isoform X2 [Nicotiana
tomentosiformis]
ref|XP_016484856.1| PREDICTED: ubiquitin receptor RAD23c-like isoform X2 [Nicotiana
tabacum]
Length = 365
Score = 115 bits (289), Expect = 2e-27
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA+QP SGG PNANPLDLFPQGLPN+GSNA AGNLDFL NSPQFQALRAMVQ
Sbjct: 200 AVNPPVQASQPAVPSGG-PNANPLDLFPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQ 258
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 259 ANPQILQP 266
>ref|XP_009781759.1| PREDICTED: ubiquitin receptor RAD23c-like isoform X2 [Nicotiana
sylvestris]
Length = 369
Score = 115 bits (289), Expect = 2e-27
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA+QP SGG PNANPLDLFPQGLPN+GSNA AGNLDFL NSPQFQALRAMVQ
Sbjct: 204 AVNPPVQASQPAVPSGG-PNANPLDLFPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQ 262
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 263 ANPQILQP 270
>ref|XP_011097188.1| ubiquitin receptor RAD23c-like [Sesamum indicum]
Length = 380
Score = 115 bits (289), Expect = 3e-27
Identities = 59/67 (88%), Positives = 59/67 (88%)
Frame = +3
Query: 393 VNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQA 572
VNP QATQ AA GGPNANPLDLFPQGLPNMGSNASAG LDFLRNS QFQALRAMVQA
Sbjct: 216 VNPPAQATQ-AAAPAGGPNANPLDLFPQGLPNMGSNASAGTLDFLRNSQQFQALRAMVQA 274
Query: 573 NPQILQP 593
NPQILQP
Sbjct: 275 NPQILQP 281
Score = 59.7 bits (143), Expect = 5e-07
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKDETTL EN VA+ SFVVIML+KNK
Sbjct: 45 MLIHQGKVLKDETTLEENKVAENSFVVIMLTKNK 78
>ref|XP_011021236.1| PREDICTED: ubiquitin receptor RAD23c isoform X4 [Populus
euphratica]
Length = 381
Score = 115 bits (289), Expect = 3e-27
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA QP A GGPNANPLDLFPQGLP+ GSNA AGNLDFLRNS QFQALRAMVQ
Sbjct: 215 AVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGNLDFLRNSQQFQALRAMVQ 274
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 275 ANPQILQP 282
>gb|PNS96398.1| hypothetical protein POPTR_017G114000v3 [Populus trichocarpa]
Length = 382
Score = 115 bits (289), Expect = 3e-27
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA QP A GGPNANPLDLFPQGLP+ GSNA AGNLDFLRNS QFQALRAMVQ
Sbjct: 216 AVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGNLDFLRNSQQFQALRAMVQ 275
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 276 ANPQILQP 283
>ref|XP_011021233.1| PREDICTED: ubiquitin receptor RAD23c isoform X3 [Populus
euphratica]
Length = 382
Score = 115 bits (289), Expect = 3e-27
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA QP A GGPNANPLDLFPQGLP+ GSNA AGNLDFLRNS QFQALRAMVQ
Sbjct: 216 AVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGNLDFLRNSQQFQALRAMVQ 275
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 276 ANPQILQP 283
>gb|PNS96399.1| hypothetical protein POPTR_017G114000v3 [Populus trichocarpa]
Length = 383
Score = 115 bits (289), Expect = 3e-27
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA QP A GGPNANPLDLFPQGLP+ GSNA AGNLDFLRNS QFQALRAMVQ
Sbjct: 217 AVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGNLDFLRNSQQFQALRAMVQ 276
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 277 ANPQILQP 284
>ref|XP_009607597.1| PREDICTED: ubiquitin receptor RAD23d-like isoform X1 [Nicotiana
tomentosiformis]
ref|XP_016484855.1| PREDICTED: ubiquitin receptor RAD23d-like isoform X1 [Nicotiana
tabacum]
Length = 383
Score = 115 bits (289), Expect = 3e-27
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA+QP SGG PNANPLDLFPQGLPN+GSNA AGNLDFL NSPQFQALRAMVQ
Sbjct: 218 AVNPPVQASQPAVPSGG-PNANPLDLFPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQ 276
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 277 ANPQILQP 284
Score = 58.5 bits (140), Expect = 1e-06
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKD TTL EN VA+ SFVVIMLSKNK
Sbjct: 45 MLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNK 78
>ref|XP_006383464.1| ubiquitin family protein [Populus trichocarpa]
Length = 384
Score = 115 bits (289), Expect = 3e-27
Identities = 56/68 (82%), Positives = 58/68 (85%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA QP A GGPNANPLDLFPQGLP+ GSNA AGNLDFLRNS QFQALRAMVQ
Sbjct: 218 AVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGNLDFLRNSQQFQALRAMVQ 277
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 278 ANPQILQP 285
>ref|XP_021815731.1| ubiquitin receptor RAD23d-like [Prunus avium]
Length = 385
Score = 115 bits (289), Expect = 3e-27
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+ NP QA QPVA + G PNANPLDLFPQGLPNMG+NA AGNLDFLRNSPQFQALRAMVQ
Sbjct: 219 AANPPAQAPQPVAPTAG-PNANPLDLFPQGLPNMGANAGAGNLDFLRNSPQFQALRAMVQ 277
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 278 ANPQILQP 285
Score = 57.0 bits (136), Expect = 4e-06
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1
Query: 1 MLIHQGKVLKDETTLAENNVADKSFVVIMLSKNK 102
MLIHQGKVLKD TTL EN VA+ SF+VIML+KNK
Sbjct: 45 MLIHQGKVLKDTTTLEENQVAENSFIVIMLTKNK 78
>ref|XP_016515235.1| PREDICTED: ubiquitin receptor RAD23d-like [Nicotiana tabacum]
Length = 387
Score = 115 bits (289), Expect = 3e-27
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA+QP SGG PNANPLDLFPQGLPN+GSNA AGNLDFL NSPQFQALRAMVQ
Sbjct: 222 AVNPPVQASQPAVPSGG-PNANPLDLFPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQ 280
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 281 ANPQILQP 288
>ref|XP_009781758.1| PREDICTED: ubiquitin receptor RAD23d-like isoform X1 [Nicotiana
sylvestris]
Length = 387
Score = 115 bits (289), Expect = 3e-27
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +3
Query: 390 SVNPSTQATQPVAASGGGPNANPLDLFPQGLPNMGSNASAGNLDFLRNSPQFQALRAMVQ 569
+VNP QA+QP SGG PNANPLDLFPQGLPN+GSNA AGNLDFL NSPQFQALRAMVQ
Sbjct: 222 AVNPPVQASQPAVPSGG-PNANPLDLFPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQ 280
Query: 570 ANPQILQP 593
ANPQILQP
Sbjct: 281 ANPQILQP 288