BLASTX nr result

ID: Rehmannia28_contig00054883 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00054883
         (708 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF24210.1| conserved hypothetical protein [Ricinus communis]...    65   4e-10
gb|EEF35481.1| conserved hypothetical protein [Ricinus communis]       65   4e-10
gb|EEF35196.1| hypothetical protein RCOM_1074840 [Ricinus communis]    63   4e-08
gb|EEF37796.1| conserved hypothetical protein [Ricinus communis]       58   3e-07

>gb|EEF24210.1| conserved hypothetical protein [Ricinus communis]
           gi|223527519|gb|EEF29644.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 32/79 (40%), Positives = 54/79 (68%)
 Frame = +3

Query: 396 NTTLAEGLALSWALRIALEHNVQDCLVYSDSEILVDGLNKRIKPDIYGELVVDDIHELAQ 575
           ++T+AE +A+ WA ++  +  ++D  V SD ++LVDGLN    P+IYGEL++ DI ++A+
Sbjct: 13  SSTVAEAMAVCWARQVIHDGGLRDVEVESDGKVLVDGLNDNGCPEIYGELLLQDIKDIAR 72

Query: 576 AVHISDFKFVQVQ*RRTYL 632
            V++  FKF Q+  R  Y+
Sbjct: 73  LVNV--FKFSQIARRLAYI 89


>gb|EEF35481.1| conserved hypothetical protein [Ricinus communis]
          Length = 126

 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 33/81 (40%), Positives = 50/81 (61%)
 Frame = +3

Query: 363 IAAGKKVKMDCNTTLAEGLALSWALRIALEHNVQDCLVYSDSEILVDGLNKRIKPDIYGE 542
           +A GK++     +T+AE LA+ WAL I     +QD    SDS++LVDG N +  P+I+ E
Sbjct: 1   MAGGKRMVAKACSTMAETLAMRWALTIVGASRIQDIEAESDSKVLVDGSNGKCCPNIHEE 60

Query: 543 LVVDDIHELAQAVHISDFKFV 605
           L++ DI  LA  + +  F+FV
Sbjct: 61  LILQDIQLLADNIGVQSFQFV 81


>gb|EEF35196.1| hypothetical protein RCOM_1074840 [Ricinus communis]
          Length = 339

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 27/92 (29%), Positives = 54/92 (58%)
 Frame = +3

Query: 360 IIAAGKKVKMDCNTTLAEGLALSWALRIALEHNVQDCLVYSDSEILVDGLNKRIKPDIYG 539
           ++A  ++V+M+ +T +AE L + WAL       ++D ++ +D +I++DGLN +  P+IYG
Sbjct: 248 LLAGARRVQMEGSTVVAEALTIRWALETICASGIRDIIMENDCKIVIDGLNDKGCPEIYG 307

Query: 540 ELVVDDIHELAQAVHISDFKFVQVQ*RRTYLC 635
           E+++ D   + + + +  F F +    R   C
Sbjct: 308 EMLLPDTTTIVENIDVPQFVFDKCDANRVTHC 339


>gb|EEF37796.1| conserved hypothetical protein [Ricinus communis]
          Length = 136

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 27/83 (32%), Positives = 48/83 (57%)
 Frame = +3

Query: 360 IIAAGKKVKMDCNTTLAEGLALSWALRIALEHNVQDCLVYSDSEILVDGLNKRIKPDIYG 539
           ++   K+V M C++T+AE  ++ WAL       ++   V SDS+ LV+GLN    P+++ 
Sbjct: 17  LLVGAKRVVMQCSSTVAEACSMRWALETIKACGIRILEVESDSKALVEGLNDNTCPELHE 76

Query: 540 ELVVDDIHELAQAVHISDFKFVQ 608
           EL+V D   +A+ + +  F F +
Sbjct: 77  ELLVQDTRAVAKDLDVKSFTFTR 99


Top