BLASTX nr result

ID: Rehmannia28_contig00054834 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00054834
         (479 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDQ74219.1| unnamed protein product [Oncorhynchus mykiss]          57   4e-07
emb|CDQ80644.1| unnamed protein product, partial [Oncorhynchus m...    57   5e-07
emb|CDQ82851.1| unnamed protein product [Oncorhynchus mykiss]          55   7e-07
ref|XP_003151341.1| hypothetical protein LOAG_15806 [Loa loa] gi...    54   1e-06
ref|XP_003148019.1| hypothetical protein LOAG_12458 [Loa loa]          53   3e-06
ref|XP_001893711.1| T-cell receptor beta chain ANA 11 [Brugia ma...    52   6e-06
gb|EHH53033.1| hypothetical protein EGM_13591, partial [Macaca f...    51   9e-06
ref|XP_001900795.1| T-cell receptor beta chain ANA 11 [Brugia ma...    52   9e-06

>emb|CDQ74219.1| unnamed protein product [Oncorhynchus mykiss]
          Length = 238

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -2

Query: 175 THTHSYARTHRQTHTL*KFTHRRTHT-PHTISHTHNTLEIIYIYI*MHPHKHIEIYTH 5
           THTHS++ TH  THT    TH  THT  HT +HTH T    Y+ +  H H H   +TH
Sbjct: 166 THTHSHSHTHTHTHT---HTHTHTHTHTHTHTHTHTTTPHYYVLLXXHTHTHTHTHTH 220


>emb|CDQ80644.1| unnamed protein product, partial [Oncorhynchus mykiss]
          Length = 197

 Score = 56.6 bits (135), Expect = 5e-07
 Identities = 28/71 (39%), Positives = 33/71 (46%)
 Frame = -2

Query: 217 NPFPAIAYTKDLLKTHTHSYARTHRQTHTL*KFTHRRTHTPHTISHTHNTLEIIYIYI*M 38
           NP     YT  L  THTH++  TH  THT    TH  TH  HT+ HTH        +   
Sbjct: 117 NPIECCEYTHTLTHTHTHTHTHTHTHTHTH-THTHTHTHXTHTLRHTHT-------HTRT 168

Query: 37  HPHKHIEIYTH 5
           H H H   +TH
Sbjct: 169 HTHTHTHTHTH 179


>emb|CDQ82851.1| unnamed protein product [Oncorhynchus mykiss]
          Length = 154

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -2

Query: 175 THTHSYARTHRQTHTL*KFTHRRTHT---PHTISHTHNTLEIIYIYI*MHPHKHIEIYTH 5
           THTH++  TH  THT    TH  THT    HT +HTH     IYIY   H H H   +TH
Sbjct: 84  THTHTHTHTHTHTHTHXXHTHTHTHTHTHTHTHTHTHTHTHNIYIYN-THTHTHTHTHTH 142


>ref|XP_003151341.1| hypothetical protein LOAG_15806 [Loa loa]
           gi|307753494|gb|EFO12728.1| hypothetical protein
           LOAG_15806 [Loa loa]
          Length = 103

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 28/57 (49%), Positives = 32/57 (56%)
 Frame = -2

Query: 175 THTHSYARTHRQTHTL*KFTHRRTHTPHTISHTHNTLEIIYIYI*MHPHKHIEIYTH 5
           THTH +  TH  THT    TH  THT H   HTHNT   I+I+I  H H H   +TH
Sbjct: 51  THTHIHIHTHTHTHT---HTHTHTHT-HIHIHTHNTHTHIHIHIHTHIHIHTHTHTH 103


>ref|XP_003148019.1| hypothetical protein LOAG_12458 [Loa loa]
          Length = 100

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 29/66 (43%), Positives = 35/66 (53%)
 Frame = -2

Query: 202 IAYTKDLLKTHTHSYARTHRQTHTL*KFTHRRTHTPHTISHTHNTLEIIYIYI*MHPHKH 23
           I YT   + THTH+Y  TH  THT   +TH RTHT  T +H H     IYI++      H
Sbjct: 14  ITYTHLHMHTHTHTYIHTHTHTHT---YTHTRTHT-RTYTHAH-AYTHIYIHVHTQMDTH 68

Query: 22  IEIYTH 5
              YTH
Sbjct: 69  AHAYTH 74


>ref|XP_001893711.1| T-cell receptor beta chain ANA 11 [Brugia malayi]
          Length = 107

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
 Frame = -2

Query: 175 THTHSYARTHRQTHTL*KFTHRRTHTPHTISHTHNTLEIIYIY------I*MHPHKHIEI 14
           THTH++  TH  THT    TH  THT HT +HTH T ++ YI+        +H H HI  
Sbjct: 47  THTHTHTHTHTHTHT---HTHTHTHT-HTHTHTHTT-KVTYIHKTCAKHTYIHMHTHIST 101

Query: 13  YTHI 2
           Y H+
Sbjct: 102 YKHV 105


>gb|EHH53033.1| hypothetical protein EGM_13591, partial [Macaca fascicularis]
          Length = 95

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 28/64 (43%), Positives = 36/64 (56%)
 Frame = -2

Query: 196 YTKDLLKTHTHSYARTHRQTHTL*KFTHRRTHTPHTISHTHNTLEIIYIYI*MHPHKHIE 17
           +T    +THTH++ARTH  THT    TH   +T HT  HTHNT   ++  I  H H H  
Sbjct: 11  HTHTHTRTHTHAHARTHTHTHT---HTHTHAYT-HTHRHTHNTHTHMHTLIHTHTHTHTH 66

Query: 16  IYTH 5
            +TH
Sbjct: 67  -HTH 69


>ref|XP_001900795.1| T-cell receptor beta chain ANA 11 [Brugia malayi]
          Length = 130

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 12/69 (17%)
 Frame = -2

Query: 175 THTHSYARTHRQTHTL*KFTHRRTHT-PHTISHTHN--TLEIIYIYI---------*MHP 32
           THTH++  TH  THTL   TH  THT  HT +HTHN  T+  ++ YI           H 
Sbjct: 24  THTHTHTHTHTHTHTLHTHTHTHTHTHTHTHTHTHNMPTIRPVHSYIQNNKVCAHTRTHT 83

Query: 31  HKHIEIYTH 5
           ++H+  +TH
Sbjct: 84  YEHVCTHTH 92


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