BLASTX nr result

ID: Rehmannia28_contig00054810 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00054810
         (591 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236389.1| PREDICTED: uncharacterized protein LOC101255...    70   2e-11
ref|XP_006343135.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...    69   3e-11
gb|EPS61692.1| hypothetical protein M569_13108 [Genlisea aurea]        66   1e-10
ref|XP_015069007.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...    68   1e-10
ref|XP_009626395.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...    56   2e-06

>ref|XP_004236389.1| PREDICTED: uncharacterized protein LOC101255578 [Solanum
           lycopersicum]
          Length = 220

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 44/131 (33%), Positives = 68/131 (51%)
 Frame = +2

Query: 53  DDYCDAWQDQNLQIPQHIPSTDHNLDQFFIAFQVETTYPLILXXXXXXXXXXNQILRVVG 232
           DDYCDA QD++L +    P++    DQFFI F+VE                 +++  ++ 
Sbjct: 6   DDYCDAHQDESLDVSSVEPTS---YDQFFIKFEVEFLREQEDDDDDEEELYVSRLESIIK 62

Query: 233 TDFLTFWAPCPRLKDENLPKDRISKMLSRAGVPLHKQEYMVDRISGRADEIANAAYNRDT 412
           T    F   C RL   NL    +++ML    VP+ +Q  ++ +I   AD IAN  YNR+ 
Sbjct: 63  TGI--FQERCDRLPHNNLSWHNVTRMLHIMEVPVDRQPMILHQICNFADRIANEPYNRNK 120

Query: 413 RVLPMLVSISV 445
           ++LP+ V IS+
Sbjct: 121 KILPIKVYISL 131


>ref|XP_006343135.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Solanum
           tuberosum]
          Length = 219

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
 Frame = +2

Query: 53  DDYCDAWQDQNLQIPQHIPSTDHNLDQFFIAFQVETTYPLILXXXXXXXXXXNQILRVVG 232
           DDYCDA QD++L      P++    DQFFI F+VE                 ++ L V  
Sbjct: 6   DDYCDAHQDESLDTSSVEPTS---YDQFFIKFEVE-------FLREQEDEDEDEELNVSR 55

Query: 233 TDFLT----FWAPCPRLKDENLPKDRISKMLSRAGVPLHKQEYMVDRISGRADEIANAAY 400
            + +     F   C RL   NL    +++ML    VP+H+Q  ++ +I   AD IAN  Y
Sbjct: 56  LESIIKIGIFQERCDRLPHNNLSWHNVTRMLHIMEVPVHRQPMILRQICTFADRIANETY 115

Query: 401 NRDTRVLPMLVSISV 445
           NR+ ++LPM V IS+
Sbjct: 116 NRNKKILPMKVYISL 130


>gb|EPS61692.1| hypothetical protein M569_13108 [Genlisea aurea]
          Length = 145

 Score = 66.2 bits (160), Expect = 1e-10
 Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
 Frame = +2

Query: 32  MDCYEPVDDYCDAWQDQNLQIPQHIPSTDHNLDQ----FFIAFQVETTYPLILXXXXXXX 199
           MDC  PVDD     Q  N  IP+  P    N+D       I   VET  P          
Sbjct: 1   MDCDVPVDDLITILQPDNFTIPK--PPDYINVDSGDSYLCIVVDVETMIP---WDEYEHP 55

Query: 200 XXXNQILRVVGTDFLTFWAPCPRLKDENLPKDRISKMLSRAGVPLHKQEYMVDRISGRAD 379
                 + V  T   T+W PC R    +L  ++IS ML  AGVP+HKQ  M ++++   D
Sbjct: 56  FFNLDDIEVFSTS-RTYWEPCHR----SLSHEKISGMLLEAGVPVHKQYGMPEQVAAFVD 110

Query: 380 EIANAAYNRDTRVLPMLVSISVVACLC 460
           E+    +    +++P+LV + +VAC C
Sbjct: 111 EVI-TKHGSAEKIIPILVQVDIVACFC 136


>ref|XP_015069007.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Solanum
           pennellii]
          Length = 221

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
 Frame = +2

Query: 53  DDYCDAWQDQNLQIPQHIPSTDHNLDQFFIAFQVETTYPLILXXXXXXXXXXNQILRVVG 232
           DDYCDA QD++L +    P++    DQFFI F+VE      L          ++ L V  
Sbjct: 6   DDYCDAHQDESLDVSSVEPTS---YDQFFIKFEVE-----FLREQEDEDDDDDEELYVSR 57

Query: 233 TDFLT----FWAPCPRLKDENLPKDRISKMLSRAGVPLHKQEYMVDRISGRADEIANAAY 400
            + +     F   C RL   NL    +++ML    VP+ +Q  ++ +I   AD IAN  Y
Sbjct: 58  LESIIKTGIFQERCDRLPRNNLSWHNVTRMLHIMEVPVDRQPMILHQICNFADRIANEPY 117

Query: 401 NRDTRVLPMLVSISV 445
           NR+ ++LP+ V IS+
Sbjct: 118 NRNKKILPIKVYISL 132


>ref|XP_009626395.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Nicotiana
           tomentosiformis]
          Length = 236

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 47/158 (29%), Positives = 74/158 (46%)
 Frame = +2

Query: 32  MDCYEPVDDYCDAWQDQNLQIPQHIPSTDHNLDQFFIAFQVETTYPLILXXXXXXXXXXN 211
           MD    V+D C A++D++L I    P+     DQFFI  +VE    L            +
Sbjct: 1   MDYAPVVNDTCYAYEDESLDISCVEPT---RYDQFFIKIEVEFR-KLPEQDQDNDEPDFS 56

Query: 212 QILRVVGTDFLTFWAPCPRLKDENLPKDRISKMLSRAGVPLHKQEYMVDRISGRADEIAN 391
           ++     T+   F   C R+   NL    +++ML   GV ++  EYM  R+   AD+I N
Sbjct: 57  RLEITRKTEI--FLERCNRMPYNNLSLHSVTRMLDIMGVQVYDHEYMFYRMLLCADKIVN 114

Query: 392 AAYNRDTRVLPMLVSISVVACLCYADMDHNK*LITLET 505
             +NR+ ++LPM V I++       + D +  LI   T
Sbjct: 115 EPHNRNKKILPMKVFITIAVNYSLEEPDDSFVLIHTNT 152


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