BLASTX nr result

ID: Rehmannia28_contig00054677 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00054677
         (368 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001119514.1| uncharacterized protein [Arabidopsis thalian...    62   3e-10
ref|XP_002866734.1| hypothetical protein ARALYDRAFT_920040 [Arab...    61   8e-10
ref|XP_010464835.1| PREDICTED: uncharacterized protein LOC104745...    57   3e-08
ref|XP_006393878.1| hypothetical protein EUTSA_v10005479mg [Eutr...    54   3e-07
gb|KFK28366.1| hypothetical protein AALP_AA8G506000 [Arabis alpina]    53   5e-07

>ref|NP_001119514.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332010884|gb|AED98267.1| uncharacterized protein
           AT5G66816 [Arabidopsis thaliana]
          Length = 101

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
 Frame = -3

Query: 294 LHMFLFFVLALVIISCM--EIQFSDGRQLKPGKNADHNDDLFQVSTGLEKIFRRILNNNA 121
           + + ++ +L+++ IS +  EIQF++ RQL+   + DH+D  F V  G    F        
Sbjct: 1   MKLSVYIILSILFISTVFYEIQFTEARQLRKTDDQDHDDHHFTV--GYTDDF-------- 50

Query: 120 HFIEHTSPGNSPGVGHHLP-------GQKDDYK--VLGHSPGIGHSIGN 1
                TSPGNSPG+GH +        G KDD++    GHSPG+GH++ N
Sbjct: 51  ---GPTSPGNSPGIGHKMKENEENAGGYKDDFEPTTPGHSPGVGHAVKN 96


>ref|XP_002866734.1| hypothetical protein ARALYDRAFT_920040 [Arabidopsis lyrata subsp.
           lyrata] gi|297312569|gb|EFH42993.1| hypothetical protein
           ARALYDRAFT_920040 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score = 60.8 bits (146), Expect = 8e-10
 Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
 Frame = -3

Query: 294 LHMFLFFVLALVIISCM--EIQFSDGRQLKPGKNADHNDDLFQVSTGLEKIFRRILNNNA 121
           + + ++ +L+++ IS +  +IQF++ RQL+   + DH+D  F V  G    F        
Sbjct: 1   MKLSVYIILSILFISTVFYKIQFTEARQLRKTNDQDHDDRHFTV--GYTDDFGP------ 52

Query: 120 HFIEHTSPGNSPGVGH-------HLPGQKDDYK--VLGHSPGIGHSIGN 1
                TSPGNSPG+GH       ++ G KDD++    GHSPG+GH++ N
Sbjct: 53  -----TSPGNSPGIGHKMKENEENVEGYKDDFEPTTPGHSPGVGHTVKN 96


>ref|XP_010464835.1| PREDICTED: uncharacterized protein LOC104745331 [Camelina sativa]
           gi|727627554|ref|XP_010484584.1| PREDICTED:
           uncharacterized protein LOC104762884 [Camelina sativa]
          Length = 98

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
 Frame = -3

Query: 294 LHMFLFFVLALVIISCM--EIQFSDGRQLKPGKNADHNDDLFQVSTGLEKIFRRILNNNA 121
           + + ++ VL+++ +S +   IQF+D RQL+   + DH+   F V              + 
Sbjct: 1   MKLSVYIVLSILFVSTIYYNIQFTDARQLRKTDDHDHH---FTVG-------------HT 44

Query: 120 HFIEHTSPGNSPGVGHHLPGQ-------KDDYK--VLGHSPGIGHSIGN 1
                TSPGNSPG+GH +          KDD+K    GHSPG+GHS+ N
Sbjct: 45  EDFAPTSPGNSPGIGHKMKEDKENVERFKDDFKPTTPGHSPGVGHSVKN 93


>ref|XP_006393878.1| hypothetical protein EUTSA_v10005479mg [Eutrema salsugineum]
           gi|557090517|gb|ESQ31164.1| hypothetical protein
           EUTSA_v10005479mg [Eutrema salsugineum]
          Length = 100

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
 Frame = -3

Query: 279 FFVLALVIISCM--EIQFSDGRQLKPGKNADHNDDLFQVSTGLEKIFRRILNNNAHFIEH 106
           + +L ++ I  +  +IQF++ RQL+     DH+       TG    F             
Sbjct: 6   YIILTILFIPMIFYKIQFTEARQLRKTNGEDHDHHFI---TGYTDDFGP----------- 51

Query: 105 TSPGNSPGVGH-------HLPGQKDDYK--VLGHSPGIGHSIGN 1
           TSPGNSPG+GH       ++ G KDD+K    GHSPG+GH+  N
Sbjct: 52  TSPGNSPGIGHKMKENNENVQGFKDDFKPTTPGHSPGVGHAANN 95


>gb|KFK28366.1| hypothetical protein AALP_AA8G506000 [Arabis alpina]
          Length = 86

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
 Frame = -3

Query: 240 IQFSDGRQLKPGKNADHNDDLFQVSTGLEKIFRRILNNNAHFIEHTSPGNSPGVGHHL-- 67
           IQF++ RQL+   +   +D  F                N      TSPGNSPG+GH +  
Sbjct: 6   IQFTEARQLREADDGQDHDHHFTAG-------------NTEDFGPTSPGNSPGIGHKMKE 52

Query: 66  -----PGQKDDYK--VLGHSPGIGHSIGN 1
                 G KDD+K    GHSPG+GH + N
Sbjct: 53  NNEIAEGFKDDFKPTTPGHSPGVGHGVKN 81


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