BLASTX nr result
ID: Rehmannia28_contig00054631
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00054631
(389 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF23229.2| Os08g0236200 [Oryza sativa Japonica Group] 105 3e-24
ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431... 105 5e-24
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046, p... 104 1e-23
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc... 102 5e-23
ref|XP_008646585.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 102 6e-23
ref|XP_002457888.1| hypothetical protein SORBIDRAFT_03g018841, p... 101 1e-22
emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group] gi... 101 2e-22
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group] 101 2e-22
gb|KYP55171.1| Retrovirus-related Pol polyprotein from transposo... 93 2e-22
gb|KYP72066.1| Copia protein [Cajanus cajan] 98 2e-22
dbj|BAH93014.1| Os05g0235100, partial [Oryza sativa Japonica Group] 98 3e-21
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 98 3e-21
dbj|BAH93126.1| Os05g0380700 [Oryza sativa Japonica Group] 91 3e-21
dbj|BAS93761.1| Os05g0380700, partial [Oryza sativa Japonica Group] 91 8e-21
ref|XP_013617918.1| PREDICTED: uncharacterized protein LOC106324... 96 2e-20
gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon po... 96 2e-20
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 96 2e-20
gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 96 2e-20
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 96 2e-20
ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787, p... 96 2e-20
>dbj|BAF23229.2| Os08g0236200 [Oryza sativa Japonica Group]
Length = 624
Score = 105 bits (263), Expect = 3e-24
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH LPDYS LRVFG LC+P L AT P KLSP+S+PC+F+GY +H G+RC ++ T +++
Sbjct: 273 LHNKLPDYSNLRVFGCLCYPNLSATTPHKLSPRSAPCVFLGYPASHKGFRCLDISTRRLY 332
Query: 208 ISRHVTFDESRFPFHGSP 155
ISRHV FD+ FPF P
Sbjct: 333 ISRHVVFDDKTFPFAAIP 350
>ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431265 [Malus domestica]
Length = 1110
Score = 105 bits (262), Expect = 5e-24
Identities = 54/111 (48%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
L+ P+Y LL+VFG CFP+L KL PKS C+F+GYS NH GYRC + T +++
Sbjct: 915 LYHRAPNYDLLKVFGCACFPWLKPYTSSKLDPKSRACVFLGYSLNHKGYRCLDPATHRVY 974
Query: 208 ISRHVTFDESRFPFHGSPTVPPPQTHFPSPIHLAPHSGPILPA---FNFPL 65
ISRHV F+ES FPFH +P PSP L P S LP+ F FPL
Sbjct: 975 ISRHVIFNESSFPFHHISNIP------PSPSSLPPRSPSSLPSTLTFTFPL 1019
>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046, partial [Sorghum
bicolor]
Length = 856
Score = 104 bits (260), Expect = 1e-23
Identities = 48/83 (57%), Positives = 60/83 (72%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
L+ +LP Y LRVFGS C+P L AT P KL+P+SS C+F+GYSP+H GYRC +L T ++
Sbjct: 58 LYGTLPSYHDLRVFGSTCYPNLTATTPHKLAPRSSLCVFIGYSPDHKGYRCLDLTTNRVI 117
Query: 208 ISRHVTFDESRFPFHGSPTVPPP 140
ISRHV FDE+ FPF PPP
Sbjct: 118 ISRHVVFDETTFPFSLRRPSPPP 140
>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 978
Score = 102 bits (255), Expect = 5e-23
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH LPDYS LRVFG LC+P L AT P KLSP+S+ C+F+GY +H G+RC ++ T ++
Sbjct: 245 LHNKLPDYSNLRVFGCLCYPNLSATTPHKLSPRSAACVFLGYPASHKGFRCLDISTRHLY 304
Query: 208 ISRHVTFDESRFPFHGSP 155
ISRHV FDE FPF P
Sbjct: 305 ISRHVVFDEQTFPFAAVP 322
>ref|XP_008646585.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103628087 [Zea mays]
Length = 1134
Score = 102 bits (254), Expect = 6e-23
Identities = 49/99 (49%), Positives = 65/99 (65%)
Frame = -2
Query: 373 PDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIHISRHV 194
P Y LRVFG C+P L +T P KL+P+S+ C+F+GYSP+H GYRC +L + ++ ISRHV
Sbjct: 564 PSYDHLRVFGCACYPNLASTTPHKLAPRSTRCVFLGYSPDHKGYRCLDLASHRVLISRHV 623
Query: 193 TFDESRFPFHGSPTVPPPQTHFPSPIHLAPHSGPILPAF 77
FDES FPF +PT T + L P S I+P+F
Sbjct: 624 VFDESDFPFSSAPTA--SHTDLDVLLDLDPVSPTIVPSF 660
>ref|XP_002457888.1| hypothetical protein SORBIDRAFT_03g018841, partial [Sorghum
bicolor]
Length = 787
Score = 101 bits (252), Expect = 1e-22
Identities = 46/79 (58%), Positives = 60/79 (75%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH +LPDYS LRVFG L +P L AT P KL+P+S+PC+F+GY +H GYRC ++ T +I
Sbjct: 191 LHGTLPDYSSLRVFGCLYYPNLTATTPHKLAPRSAPCVFLGYPSSHKGYRCVDMATHRII 250
Query: 208 ISRHVTFDESRFPFHGSPT 152
ISRHV F+ES FPF +P+
Sbjct: 251 ISRHVIFNESVFPFSATPS 269
>emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group]
gi|38605921|emb|CAE05956.3| OSJNBb0088C09.15 [Oryza
sativa Japonica Group]
Length = 1246
Score = 101 bits (251), Expect = 2e-22
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 11/119 (9%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH+ +P+YS+LRVFG LC+P L AT KL+P S+ C+F+GY +H GY C N+ T +I
Sbjct: 533 LHRKIPNYSMLRVFGCLCYPNLSATAAHKLAPYSAACVFLGYPSSHKGYCCLNISTRRII 592
Query: 208 ISRHVTFDESRFPFHGSPT-----------VPPPQTHFPSPIHLAPHSGPILPAFNFPL 65
IS HV FDE++FPF G P P P PS LA P LP FP+
Sbjct: 593 ISCHVIFDETQFPFSGDPVDASSLDFLLQDAPAPSVIAPS---LAGVEQPHLPHAPFPV 648
>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
Length = 1455
Score = 101 bits (251), Expect = 2e-22
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 11/119 (9%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH+ +P+YS+LRVFG LC+P L AT KL+P S+ C+F+GY +H GY C N+ T +I
Sbjct: 742 LHRKIPNYSMLRVFGCLCYPNLSATAAHKLAPYSAACVFLGYPSSHKGYCCLNISTRRII 801
Query: 208 ISRHVTFDESRFPFHGSPT-----------VPPPQTHFPSPIHLAPHSGPILPAFNFPL 65
IS HV FDE++FPF G P P P PS LA P LP FP+
Sbjct: 802 ISCHVIFDETQFPFSGDPVDASSLDFLLQDAPAPSVIAPS---LAGVEQPHLPHAPFPV 857
>gb|KYP55171.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 97
Score = 93.2 bits (230), Expect = 2e-22
Identities = 40/74 (54%), Positives = 55/74 (74%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
L++ P YS LRVFG LC+P + +T +KL P+SS C+F+GY PNH GY+C++L + KI
Sbjct: 23 LYQKDPSYSHLRVFGCLCYPLIPSTTINKLQPRSSSCVFLGYPPNHCGYKCFDLSSQKII 82
Query: 208 ISRHVTFDESRFPF 167
IS HV FDE++F F
Sbjct: 83 ISHHVIFDETQFSF 96
>gb|KYP72066.1| Copia protein [Cajanus cajan]
Length = 274
Score = 97.8 bits (242), Expect = 2e-22
Identities = 55/115 (47%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
L S P+YS LRVFG LCFP+LG +KL KS PCIF+GYSP Y CYNL + ++
Sbjct: 15 LFHSPPNYSKLRVFGCLCFPWLGPYTTNKLQAKSKPCIFLGYSPTQSAYLCYNLESKNLY 74
Query: 208 ISRHVTFDESRFPFHGSPTVPPPQTHFP--SPIHLAPHSGPILPAFN--FPLQHA 56
SRHVTF E FP H S PP P PI S P LP + P+ H+
Sbjct: 75 TSRHVTFIEDTFP-HASLISPPKNPSIPLIPPITNKSISQPFLPTLSNQDPMHHS 128
>dbj|BAH93014.1| Os05g0235100, partial [Oryza sativa Japonica Group]
Length = 841
Score = 97.8 bits (242), Expect = 3e-21
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH LPDYS L+VFG LC+P L A KLSP+S+P +F+GYS +H G+RC ++ T +++
Sbjct: 62 LHNKLPDYSNLQVFGCLCYPNLSAMTSHKLSPRSAPYVFLGYSASHKGFRCLDISTRRLY 121
Query: 208 ISRHVTFDESRFPFHGSP 155
ISRHV FDE FPF P
Sbjct: 122 ISRHVVFDEKTFPFAAIP 139
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 97.8 bits (242), Expect = 3e-21
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH LPDYS L+VFG LC+P L A KLSP+S+P +F+GYS +H G+RC ++ T +++
Sbjct: 701 LHNKLPDYSNLQVFGCLCYPNLSAMTSHKLSPRSAPYVFLGYSASHKGFRCLDISTRRLY 760
Query: 208 ISRHVTFDESRFPFHGSP 155
ISRHV FDE FPF P
Sbjct: 761 ISRHVVFDEKTFPFAAIP 778
>dbj|BAH93126.1| Os05g0380700 [Oryza sativa Japonica Group]
Length = 136
Score = 91.3 bits (225), Expect = 3e-21
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH+ +PDYS+L VFG LC+P L AT KL+P+S+ C+F+GY +H GYRC N+ T +I
Sbjct: 34 LHRKIPDYSMLHVFGCLCYPNLSATAAHKLAPRSAVCVFLGYPSSHKGYRCLNISTRRII 93
Query: 208 ISRHVTFDES 179
I RHV FDE+
Sbjct: 94 ILRHVIFDET 103
>dbj|BAS93761.1| Os05g0380700, partial [Oryza sativa Japonica Group]
Length = 173
Score = 91.3 bits (225), Expect = 8e-21
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = -2
Query: 388 LHKSLPDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIH 209
LH+ +PDYS+L VFG LC+P L AT KL+P+S+ C+F+GY +H GYRC N+ T +I
Sbjct: 71 LHRKIPDYSMLHVFGCLCYPNLSATAAHKLAPRSAVCVFLGYPSSHKGYRCLNISTRRII 130
Query: 208 ISRHVTFDES 179
I RHV FDE+
Sbjct: 131 ILRHVIFDET 140
>ref|XP_013617918.1| PREDICTED: uncharacterized protein LOC106324503 [Brassica oleracea
var. oleracea] gi|923751115|ref|XP_013674458.1|
PREDICTED: uncharacterized protein LOC106378962
[Brassica napus]
Length = 592
Score = 95.5 bits (236), Expect = 2e-20
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = -2
Query: 388 LHKSL---PDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTG 218
LHK P+YS R+FGSLCFP+L KL +S+PC+F+GYSP Y C TG
Sbjct: 411 LHKLFVTHPNYSKTRIFGSLCFPWLRPYTIHKLKDRSTPCVFIGYSPTQSAYLCLQPSTG 470
Query: 217 KIHISRHVTFDESRFPFHGSPTVPPPQTHFPSPIHLAP 104
+I++SRHV F ES FPFH PPP+ P H P
Sbjct: 471 RIYVSRHVRFGESVFPFH-KLLAPPPKPETSPPYHSPP 507
>gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group]
Length = 1302
Score = 95.5 bits (236), Expect = 2e-20
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Frame = -2
Query: 373 PDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIHISRHV 194
P Y LRVFG LC+P AT P KLSP+S C+F+GY +H GYRCY++ + ++ SRHV
Sbjct: 618 PTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHV 677
Query: 193 TFDESRFPFHGS----PTVPPPQTHFPSPIHLAP 104
TF E FPF + P+ PPP H I L P
Sbjct: 678 TFVEDVFPFRDAPSPRPSAPPPPDHGDDTIVLLP 711
>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
Length = 1361
Score = 95.5 bits (236), Expect = 2e-20
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = -2
Query: 373 PDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIHISRHV 194
PDYS+LR FG LCFP+L P+KLSPKS+PC+F+GYS H G+RC + T ++++SRHV
Sbjct: 638 PDYSMLRTFGCLCFPYLRDYSPNKLSPKSTPCVFLGYSTLHKGFRCLDRKTHRVYVSRHV 697
Query: 193 TFDESRFPFHG 161
F E FP++G
Sbjct: 698 QFYEHTFPYNG 708
>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1414
Score = 95.5 bits (236), Expect = 2e-20
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Frame = -2
Query: 373 PDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIHISRHV 194
P Y LRVFG LC+P AT P KLSP+S C+F+GY +H GYRCY++ + ++ SRHV
Sbjct: 716 PTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHV 775
Query: 193 TFDESRFPFHGS----PTVPPPQTHFPSPIHLAP 104
TF E FPF + P+ PPP H I L P
Sbjct: 776 TFVEDVFPFRDAPSPRPSAPPPPDHGDDTIVLLP 809
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 95.5 bits (236), Expect = 2e-20
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Frame = -2
Query: 373 PDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIHISRHV 194
P Y LRVFG LC+P AT P KLSP+S C+F+GY +H GYRCY++ + ++ SRHV
Sbjct: 716 PTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHV 775
Query: 193 TFDESRFPFHGS----PTVPPPQTHFPSPIHLAP 104
TF E FPF + P+ PPP H I L P
Sbjct: 776 TFVEDVFPFRDAPSPRPSAPPPPDHGDDTIVLLP 809
>ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787, partial [Sorghum bicolor]
Length = 1567
Score = 95.5 bits (236), Expect = 2e-20
Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Frame = -2
Query: 373 PDYSLLRVFGSLCFPFLGATKPDKLSPKSSPCIFVGYSPNHIGYRCYNLGTGKIHISRHV 194
P Y LRVFG C+P AT P KL+P+S+ C+F+GYSP+H GYRCY+L + ++ ISRHV
Sbjct: 789 PRYDHLRVFGCACYPNTTATAPHKLAPRSTLCVFLGYSPDHKGYRCYDLTSRRVLISRHV 848
Query: 193 TFDESRFPFHGSPTVPPPQTH-----FPSPIHLAPHSGPILPA 80
FDES FPF + T H FP+ + P P+ PA
Sbjct: 849 VFDESIFPFSTTTTPASTSEHDLFSVFPTDPVVEP-PFPVFPA 890