BLASTX nr result
ID: Rehmannia28_contig00054624
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00054624
(367 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ96016.1| predicted protein [Hordeum vulgare subsp. vulgare] 100 4e-25
emb|CEO94225.1| hypothetical protein PBRA_000010 [Plasmodiophora... 82 8e-18
ref|NP_197839.1| 60S acidic ribosomal family protein [Arabidopsi... 73 2e-14
emb|CDW88910.1| 60s acidic ribosomal protein p1 [Stylonychia lem... 73 2e-14
ref|XP_004365780.1| hypothetical protein CAOG_00909 [Capsaspora ... 71 9e-14
ref|XP_010689469.1| PREDICTED: 60S acidic ribosomal protein P1 [... 71 9e-14
ref|XP_003573303.1| PREDICTED: 60S acidic ribosomal protein P1 [... 71 9e-14
ref|XP_008775292.1| PREDICTED: 60S acidic ribosomal protein P1-l... 71 9e-14
ref|XP_006394706.1| hypothetical protein EUTSA_v10005602mg [Eutr... 71 9e-14
gb|KMZ72722.1| 60S acidic ribosomal protein [Zostera marina] 72 1e-13
emb|CEM04123.1| unnamed protein product [Vitrella brassicaformis... 71 1e-13
ref|XP_013659163.1| PREDICTED: 60S acidic ribosomal protein P1 [... 71 1e-13
ref|XP_009111636.1| PREDICTED: 60S acidic ribosomal protein P1 [... 71 1e-13
emb|CDY19829.1| BnaA09g04820D [Brassica napus] 71 1e-13
pir||A53221 acidic ribosomal protein P1 - hydromedusa (Polyorchi... 71 1e-13
gb|KMZ74792.1| 60S acidic ribosomal protein [Zostera marina] 70 2e-13
pdb|3J61|UU Chain u, Localization Of The Large Subunit Ribosomal... 70 2e-13
ref|XP_004529421.1| PREDICTED: 60S acidic ribosomal protein P1 [... 70 2e-13
gb|EJY81144.1| 60S acidic ribosomal protein p1, putative [Oxytri... 70 2e-13
ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays] g... 70 2e-13
>dbj|BAJ96016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 120
Score = 100 bits (249), Expect = 4e-25
Identities = 47/67 (70%), Positives = 57/67 (85%)
Frame = -1
Query: 256 MPFKVTPEEKEELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGR 77
MPFKV EEK EL+VT AAL+L+DDK+ +TAEN+TK+I AAG DVE YWPKLFS LL+GR
Sbjct: 1 MPFKVAAEEKSELMVTLAALILNDDKVPITAENLTKLINAAGGDVESYWPKLFSQLLDGR 60
Query: 76 NVDELLL 56
+V+ LLL
Sbjct: 61 DVNALLL 67
>emb|CEO94225.1| hypothetical protein PBRA_000010 [Plasmodiophora brassicae]
Length = 113
Score = 81.6 bits (200), Expect = 8e-18
Identities = 39/67 (58%), Positives = 50/67 (74%)
Frame = -1
Query: 256 MPFKVTPEEKEELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGR 77
MPF+V +K+ELL TFA L LHDD +T + + +I AAGA VEPYWPKLF ++L+GR
Sbjct: 1 MPFEVDAIQKQELLTTFACLALHDDGADLTEDGVKAMIAAAGAQVEPYWPKLFVNMLKGR 60
Query: 76 NVDELLL 56
+V ELLL
Sbjct: 61 DVAELLL 67
>ref|NP_197839.1| 60S acidic ribosomal family protein [Arabidopsis thaliana]
gi|10177851|dbj|BAB11203.1| 60s acidic ribosomal protein
P1 [Arabidopsis thaliana] gi|67633816|gb|AAY78832.1|
putative 60S acidic ribosomal protein P1 [Arabidopsis
thaliana] gi|332005935|gb|AED93318.1| 60S acidic
ribosomal family protein [Arabidopsis thaliana]
Length = 111
Score = 73.2 bits (178), Expect = 2e-14
Identities = 31/56 (55%), Positives = 44/56 (78%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AAL+LHDD I +TAENI+K++K A +VE YWP LF+ L E +N+D+L++
Sbjct: 5 ELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
>emb|CDW88910.1| 60s acidic ribosomal protein p1 [Stylonychia lemnae]
Length = 121
Score = 73.2 bits (178), Expect = 2e-14
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = -1
Query: 247 KVTPEEKEELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVD 68
+++ +E +EL +AALLLHDD + +T E + KVIKA+G +VE YWP LF+ L+G+N++
Sbjct: 8 QLSKQEHDELTCAYAALLLHDDGLEITGEKLAKVIKASGNEVEAYWPALFAKALKGQNIE 67
Query: 67 ELL 59
+LL
Sbjct: 68 DLL 70
>ref|XP_004365780.1| hypothetical protein CAOG_00909 [Capsaspora owczarzaki ATCC 30864]
gi|765548823|gb|KJE89444.1| hypothetical protein
CAOG_000909 [Capsaspora owczarzaki ATCC 30864]
Length = 109
Score = 71.2 bits (173), Expect = 9e-14
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -1
Query: 229 KEELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELL 59
K EL +AAL+LHDD +AVTA+ I+K+I AA DVE YWP LF+ LEGR++ +L+
Sbjct: 3 KSELACVYAALILHDDDVAVTADKISKLISAAKIDVEAYWPALFAKALEGRSIGDLI 59
>ref|XP_010689469.1| PREDICTED: 60S acidic ribosomal protein P1 [Beta vulgaris subsp.
vulgaris] gi|870869467|gb|KMT20212.1| hypothetical
protein BVRB_1g002180 [Beta vulgaris subsp. vulgaris]
Length = 110
Score = 71.2 bits (173), Expect = 9e-14
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AALLLHDD +A+TAE IT VI AA + E YWP LF+ LLE ++V++L++
Sbjct: 5 ELACTYAALLLHDDSVAITAEKITTVISAANIECESYWPSLFAKLLEKKSVEDLIM 60
>ref|XP_003573303.1| PREDICTED: 60S acidic ribosomal protein P1 [Brachypodium
distachyon] gi|944059282|gb|KQJ94872.1| hypothetical
protein BRADI_3g13750 [Brachypodium distachyon]
Length = 110
Score = 71.2 bits (173), Expect = 9e-14
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
E+ T AAL+LHDD I +TAE I V+KA+G VE YWP LF+ LLE R+VD+L+L
Sbjct: 5 EVACTLAALILHDDNIPITAEKIATVVKASGIKVEAYWPALFAKLLEKRSVDDLIL 60
>ref|XP_008775292.1| PREDICTED: 60S acidic ribosomal protein P1-like [Phoenix
dactylifera]
Length = 113
Score = 71.2 bits (173), Expect = 9e-14
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AAL+LHDD I++TAE I ++KAAG ++ YW LF+ LLE RNVD+L+L
Sbjct: 5 ELACTYAALILHDDGISITAEKIMTLVKAAGLKIDSYWAPLFAKLLENRNVDDLIL 60
>ref|XP_006394706.1| hypothetical protein EUTSA_v10005602mg [Eutrema salsugineum]
gi|557091345|gb|ESQ31992.1| hypothetical protein
EUTSA_v10005602mg [Eutrema salsugineum]
Length = 113
Score = 71.2 bits (173), Expect = 9e-14
Identities = 30/56 (53%), Positives = 44/56 (78%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AAL+LHDD I +TAE I+K++KAA +VE YWP LF+ L + +N+D+L++
Sbjct: 7 ELACTYAALILHDDGIEITAEKISKLVKAANVNVESYWPSLFAKLCQKKNIDDLIM 62
>gb|KMZ72722.1| 60S acidic ribosomal protein [Zostera marina]
Length = 131
Score = 71.6 bits (174), Expect = 1e-13
Identities = 31/56 (55%), Positives = 45/56 (80%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+A+L+LHDD IA+TAE I+ ++KAA +VE YWP LF+ LLE +NV++L++
Sbjct: 28 ELACTYASLILHDDGIAITAEKISTLVKAANVNVESYWPSLFAKLLEQKNVEDLIM 83
>emb|CEM04123.1| unnamed protein product [Vitrella brassicaformis CCMP3155]
Length = 124
Score = 71.2 bits (173), Expect = 1e-13
Identities = 32/62 (51%), Positives = 47/62 (75%)
Frame = -1
Query: 244 VTPEEKEELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDE 65
++ EK+EL T+AAL+LHD++ +TAENI K++ AAG VEP+ P+LF LL+GR++
Sbjct: 9 ISDAEKQELACTYAALILHDEETDITAENIEKLVSAAGLKVEPFLPRLFEKLLQGRDLAS 68
Query: 64 LL 59
LL
Sbjct: 69 LL 70
>ref|XP_013659163.1| PREDICTED: 60S acidic ribosomal protein P1 [Brassica napus]
Length = 111
Score = 70.9 bits (172), Expect = 1e-13
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AAL+LHDD I +TAE I K++KAA +VE YWP LF+ L + +N+D+L++
Sbjct: 6 ELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIM 61
>ref|XP_009111636.1| PREDICTED: 60S acidic ribosomal protein P1 [Brassica rapa]
Length = 111
Score = 70.9 bits (172), Expect = 1e-13
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AAL+LHDD I +TAE I K++KAA +VE YWP LF+ L + +N+D+L++
Sbjct: 6 ELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIM 61
>emb|CDY19829.1| BnaA09g04820D [Brassica napus]
Length = 111
Score = 70.9 bits (172), Expect = 1e-13
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AAL+LHDD I +TAE I K++KAA +VE YWP LF+ L + +N+D+L++
Sbjct: 6 ELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIM 61
>pir||A53221 acidic ribosomal protein P1 - hydromedusa (Polyorchis penicillatus)
[Polyorchis penicillatus] gi|227678|prf||1709160A acidic
ribosomal protein A1 [Polyorchis penicillatus]
Length = 111
Score = 70.9 bits (172), Expect = 1e-13
Identities = 29/55 (52%), Positives = 42/55 (76%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELL 59
EL ++AL+LHDD +A+TAE + K+I AA +VEPYWP LF+ LEG+N+ +L+
Sbjct: 8 ELACVYSALILHDDDVAITAEKMNKIISAANVNVEPYWPGLFAKALEGKNIGDLI 62
>gb|KMZ74792.1| 60S acidic ribosomal protein [Zostera marina]
Length = 107
Score = 70.5 bits (171), Expect = 2e-13
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+A+L+LHDD IA+TAE I ++KAA VE YWP LF+ LLE +NV++L++
Sbjct: 5 ELACTYASLILHDDGIAITAEKILTLVKAANVSVESYWPSLFAKLLEQKNVEDLIM 60
>pdb|3J61|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|582044921|pdb|3J61|VV Chain v, Localization
Of The Large Subunit Ribosomal Proteins Into A 5.5 A
Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471718|gb|AAW50990.1| ribosomal protein P1
[Triticum aestivum] gi|473837338|gb|EMS47218.1| 60S
acidic ribosomal protein P1 [Triticum urartu]
gi|475518641|gb|EMT06224.1| 60S acidic ribosomal protein
P1 [Aegilops tauschii]
Length = 110
Score = 70.5 bits (171), Expect = 2e-13
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
E+ T AAL+LHDD I +T+E I V+KAAG VE YWP LF+ LLE R+VD+L+L
Sbjct: 5 EVACTLAALILHDDGIPITSEKIATVVKAAGIKVEAYWPALFAKLLEKRSVDDLIL 60
>ref|XP_004529421.1| PREDICTED: 60S acidic ribosomal protein P1 [Ceratitis capitata]
Length = 112
Score = 70.5 bits (171), Expect = 2e-13
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = -1
Query: 229 KEELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELL 59
K EL +AAL+L DD IAVT E IT ++KAA DVEPYWP LF+ LEG NV +L+
Sbjct: 4 KAELACVYAALVLVDDDIAVTGEKITTILKAASVDVEPYWPGLFAKALEGINVKDLI 60
>gb|EJY81144.1| 60S acidic ribosomal protein p1, putative [Oxytricha trifallax]
Length = 117
Score = 70.5 bits (171), Expect = 2e-13
Identities = 28/63 (44%), Positives = 50/63 (79%)
Frame = -1
Query: 247 KVTPEEKEELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVD 68
+++ +E +EL+ ++ALLLHDD + +T+E + KVIKA+G +VE YWP +F+ L+G++++
Sbjct: 8 QLSKQEHDELVCAYSALLLHDDGLEITSEKLAKVIKASGNEVEAYWPAMFAKALKGQDIE 67
Query: 67 ELL 59
+LL
Sbjct: 68 DLL 70
>ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays]
gi|670414192|ref|XP_008648318.1| PREDICTED: 60S acidic
ribosomal protein P1 isoform X1 [Zea mays]
gi|2431769|gb|AAB71079.1| acidic ribosomal protein P1a
[Zea mays] gi|195619428|gb|ACG31544.1| 60S acidic
ribosomal protein P1 [Zea mays]
gi|238014308|gb|ACR38189.1| unknown [Zea mays]
gi|413941692|gb|AFW74341.1| acidic ribosomal protein P1a
[Zea mays]
Length = 109
Score = 70.1 bits (170), Expect = 2e-13
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -1
Query: 223 ELLVTFAALLLHDDKIAVTAENITKVIKAAGADVEPYWPKLFSSLLEGRNVDELLL 56
EL T+AAL+L DD IA+TAE I ++KAA VE YWP LF+ LLE RNV++L+L
Sbjct: 5 ELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60