BLASTX nr result

ID: Rehmannia28_contig00054621 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00054621
         (449 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006848296.1| PREDICTED: uncharacterized protein LOC184380...    68   7e-12
ref|XP_002271244.1| PREDICTED: uncharacterized protein LOC100263...    64   1e-10
ref|XP_008231096.1| PREDICTED: uncharacterized protein LOC103330...    57   9e-08
ref|XP_002303782.1| hypothetical protein POPTR_0003s16790g [Popu...    53   2e-06
ref|XP_007215161.1| hypothetical protein PRUPE_ppa013521mg [Prun...    53   2e-06
gb|KVI02417.1| hypothetical protein Ccrd_019299 [Cynara carduncu...    53   2e-06

>ref|XP_006848296.1| PREDICTED: uncharacterized protein LOC18438041 [Amborella
           trichopoda] gi|548851602|gb|ERN09877.1| hypothetical
           protein AMTR_s00013p00113160 [Amborella trichopoda]
          Length = 128

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 15/122 (12%)
 Frame = -3

Query: 417 MEVSSDKRGLMKSKLIMSFYRAAKPPSAVQCTAAATIKPSTRPASLV------------- 277
           ME++   RG +K KL+MS +RA+KP S VQ +      P T     V             
Sbjct: 1   MELNRKPRGFIKGKLVMSLHRASKPTSPVQNSNKVNPSPPTTSVQFVIDKKSTIPQIAQK 60

Query: 276 KTMSFKNDDQGSFGKSDDGYIHGPNGGGGDEHVDNKASSYISYVKERLRLE--ESNLLKG 103
           KT+  K ++ G F   +   I    GG G+E VD +A  YISYV+ER RLE  ES+  K 
Sbjct: 61  KTIDAKANEVGRFNSFESNTIVS-GGGNGEESVDKRAEVYISYVQERFRLERVESDRRKF 119

Query: 102 QN 97
           Q+
Sbjct: 120 QD 121


>ref|XP_002271244.1| PREDICTED: uncharacterized protein LOC100263446 [Vitis vinifera]
           gi|147822220|emb|CAN66013.1| hypothetical protein
           VITISV_024282 [Vitis vinifera]
           gi|296082326|emb|CBI21331.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
 Frame = -3

Query: 417 MEVSSDKRGLMKSKLIMSFYRAAKPPSAVQCTAAATIKPSTRPASLVKTMSFKNDDQGSF 238
           ME +  +RG MK KL M FYR AKP S VQ ++   +KPS + + L  ++ F  D +   
Sbjct: 1   MESNRKRRGFMKGKLAMPFYRVAKPSSTVQYSSK--VKPS-QTSPLAPSVGFVVDQEYVI 57

Query: 237 GK----------SDDGY--IHGPNGGGGDEHVDNKASSYISYVKERLRLEESNLLK 106
            +          +++G   + G  G GGDE VD KA++YIS V+ER +L+  N  K
Sbjct: 58  PQPKQKVAFIIPAENGRDSLFGTYGAGGDEGVDAKAANYISVVQERFKLDRVNSKK 113


>ref|XP_008231096.1| PREDICTED: uncharacterized protein LOC103330319 [Prunus mume]
          Length = 124

 Score = 57.0 bits (136), Expect = 9e-08
 Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 23/124 (18%)
 Frame = -3

Query: 417 MEVSSDKRGLMKSKLIMSFYRAAKPPS-AVQCT----AAATIKPSTRPASLV-------- 277
           ME++  +RG MK KL M FYRAAKP + ++QC+    A++ +KPS    +          
Sbjct: 1   MELNRKRRGFMKGKL-MPFYRAAKPSTTSMQCSSMGMASSKVKPSQASPNTAAYSVGFMD 59

Query: 276 --------KTMSF--KNDDQGSFGKSDDGYIHGPNGGGGDEHVDNKASSYISYVKERLRL 127
                   +T+SF     D  S  K    + H      GDE VD KA++YIS V+ER +L
Sbjct: 60  YVIAAQPNQTVSFIVPAADHSSQLKQQFDHKHYGAAAAGDESVDMKAATYISSVQERFKL 119

Query: 126 EESN 115
           E  N
Sbjct: 120 ERIN 123


>ref|XP_002303782.1| hypothetical protein POPTR_0003s16790g [Populus trichocarpa]
           gi|222841214|gb|EEE78761.1| hypothetical protein
           POPTR_0003s16790g [Populus trichocarpa]
          Length = 109

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
 Frame = -3

Query: 396 RGLMKSKLIMSFYRAAKPPSAVQCTAAATIKPSTRPASLVK----TMSFKNDDQGSFGKS 229
           RG ++ KL+ S +R  KP   VQ  + + + PST   +       T      +  SF K 
Sbjct: 10  RGFVRGKLVKSLFRVTKPSKPVQ--SGSKVSPSTCTLNGTHVDFPTRQSYYANPPSFQKV 67

Query: 228 DDGYIHGPNGGGGDEHVDNKASSYISYVKERLRLEESN 115
               +      GGDE+VD KA++YISYV+ER  LE ++
Sbjct: 68  STTKLRSFPDSGGDENVDMKAATYISYVRERFELERAD 105


>ref|XP_007215161.1| hypothetical protein PRUPE_ppa013521mg [Prunus persica]
           gi|462411311|gb|EMJ16360.1| hypothetical protein
           PRUPE_ppa013521mg [Prunus persica]
          Length = 118

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
 Frame = -3

Query: 417 MEVSSDKRGLMKSKLIMSFYRAAKPPSAVQCTAAATIKPSTRPASLV------------- 277
           ME +  +RG MK KL M FYRAAKP S      ++ +KPS    +               
Sbjct: 1   MESNRKRRGFMKGKL-MPFYRAAKP-STTSMQYSSKVKPSQASPNTAAYSVGFMDYVIAA 58

Query: 276 ---KTMSF--KNDDQGSFGKSDDGYIHGPNGGGGDEHVDNKASSYISYVKERLRLEESN 115
              +T+SF     D  S  K    + H      GDE VD KA++YIS V+ER +LE  N
Sbjct: 59  QPNQTVSFIVPAADHSSQLKQQFDHKHYGAAAAGDESVDIKAATYISSVQERFKLERIN 117


>gb|KVI02417.1| hypothetical protein Ccrd_019299 [Cynara cardunculus var. scolymus]
          Length = 107

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
 Frame = -3

Query: 399 KRGLMKSKLIMSFYRAAKPP-SAVQCTAAATIKPST---------RPASLVKTMSFKNDD 250
           ++G +K KL+MSFYRA+KP  + +  T   T  PS+          P    K        
Sbjct: 8   RKGFIKGKLVMSFYRASKPSITTINKTHNTTALPSSSLIMNQEKVNPQPQHKVSYVIPHT 67

Query: 249 QGSFGKSDDGYIHGPNGGGGDEHVDNKASSYISYVKERLRLEESN 115
            G++G  D+     P G   DE VD KA++YIS V ER +LE  N
Sbjct: 68  TGTYGMFDN-----PYGVVADEAVDAKAATYISCVHERFQLEHVN 107


Top