BLASTX nr result

ID: Rehmannia28_contig00054541 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00054541
         (375 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004345357.1| hypothetical protein ACA1_355970 [Acanthamoe...    74   1e-13
ref|XP_013753243.1| hypothetical protein AMSG_10809 [Thecamonas ...    69   3e-12
ref|XP_004348357.1| hypothetical protein ACA1_325550 [Acanthamoe...    60   1e-08

>ref|XP_004345357.1| hypothetical protein ACA1_355970 [Acanthamoeba castellanii str.
           Neff] gi|440800189|gb|ELR21231.1| hypothetical protein
           ACA1_355970 [Acanthamoeba castellanii str. Neff]
          Length = 229

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = +1

Query: 52  KPVWPQAFSASVLISSNDRRRPEFTRWFSSRPEQKDRFDGLTEWKGEEYLAEIIVDHKAG 231
           KP WP  +SA+V   SN     +F R F      + R  G+ +WKG+ Y  E +   K  
Sbjct: 30  KPQWPSTYSATVEWRSNHHPHHKFFRMFWDEKNCRARVGGMVKWKGKHYKMEALYYGKKN 89

Query: 232 RQTNVYYDQESVVCFQFP-NNRTFPQPNFDDFEYRGLALIDYNVVLHW 372
               ++Y+++ V CF     N+T    +  D +Y+G+AL++Y+ V HW
Sbjct: 90  AAYYIFYERDQVKCFTMDLKNKTIKGLDLSDADYKGMALVEYHPVYHW 137


>ref|XP_013753243.1| hypothetical protein AMSG_10809 [Thecamonas trahens ATCC 50062]
           gi|906561948|gb|KNC55191.1| hypothetical protein
           AMSG_10809 [Thecamonas trahens ATCC 50062]
          Length = 164

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 38/90 (42%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = +1

Query: 106 RRRPEFTRWFSSRPEQKDRFDGLTEWKGEEYLAEIIVDHKAGRQTNVYYDQESVVC-FQF 282
           RRRP+F RWF S+  Q  R DG  E  GE Y      D K  +   V+Y   SV C  Q 
Sbjct: 7   RRRPQFFRWFVSQTHQVARVDGAVEHHGETYGFSEYADFKREKADQVFYGMNSVFCESQK 66

Query: 283 PNNRTFPQPNFDDFEYRGLALIDYNVVLHW 372
            +N T P PNF+ FE+ G   ID+  V  W
Sbjct: 67  MHNGTMPIPNFEHFEFVGEGDIDFQTVYIW 96


>ref|XP_004348357.1| hypothetical protein ACA1_325550 [Acanthamoeba castellanii str.
           Neff] gi|440800957|gb|ELR21983.1| hypothetical protein
           ACA1_325550 [Acanthamoeba castellanii str. Neff]
          Length = 224

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 33/107 (30%), Positives = 47/107 (43%)
 Frame = +1

Query: 52  KPVWPQAFSASVLISSNDRRRPEFTRWFSSRPEQKDRFDGLTEWKGEEYLAEIIVDHKAG 231
           KP  P AFSA+V +  N +   E+ RWF     QK R D L E  GE      I DH   
Sbjct: 30  KPTLPPAFSAAVHVQRNYKPYQEYFRWFRDEKLQKARVDRLAEVHGETLFHSFIYDHSEQ 89

Query: 232 RQTNVYYDQESVVCFQFPNNRTFPQPNFDDFEYRGLALIDYNVVLHW 372
           +   V++  E   CF           +  + E+ G + + ++ V HW
Sbjct: 90  KMFAVFFRGEVATCFTKTIRGNLTHFDLSEAEFLGKSYVYFDPVYHW 136


Top