BLASTX nr result
ID: Rehmannia28_contig00054134
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00054134
(434 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP76998.1| Transposon TX1 uncharacterized, partial [Cajanus ... 147 2e-41
gb|KYP53426.1| Transposon TX1 uncharacterized [Cajanus cajan] 147 3e-40
gb|KHM99257.1| Transposon TX1 putative 149 kDa protein, partial ... 139 9e-40
gb|KYP43067.1| Putative ribonuclease H protein At1g65750 family,... 150 2e-39
gb|KYP51174.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan] 144 2e-39
gb|KYP32328.1| Transposon TX1 uncharacterized, partial [Cajanus ... 140 3e-39
gb|KYP62678.1| Transposon TX1 uncharacterized, partial [Cajanus ... 143 3e-39
gb|KYP62659.1| Transposon TX1 uncharacterized, partial [Cajanus ... 143 4e-39
gb|KYP66721.1| Transposon TX1 uncharacterized [Cajanus cajan] 147 5e-39
gb|KYP65910.1| Transposon TX1 uncharacterized [Cajanus cajan] 142 7e-39
gb|KYP32706.1| Transposon TX1 uncharacterized [Cajanus cajan] 147 3e-38
gb|KYP72533.1| Transposon TX1 uncharacterized [Cajanus cajan] 142 3e-38
gb|KYP62677.1| Transposon TX1 uncharacterized [Cajanus cajan] 140 6e-38
gb|KHN25562.1| LINE-1 reverse transcriptase like [Glycine soja] 145 9e-38
gb|KYP47722.1| Transposon TX1 uncharacterized, partial [Cajanus ... 135 4e-37
gb|KYP44439.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 143 4e-37
gb|KYP65845.1| Transposon TX1 uncharacterized, partial [Cajanus ... 142 6e-37
gb|ABD32615.1| RNA-directed DNA polymerase , putative [Medicago ... 139 7e-37
gb|KYP51227.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 139 7e-37
gb|KYP52416.1| Retrovirus-related Pol polyprotein LINE-1, partia... 136 9e-37
>gb|KYP76998.1| Transposon TX1 uncharacterized, partial [Cajanus cajan]
Length = 257
Score = 147 bits (370), Expect = 2e-41
Identities = 69/139 (49%), Positives = 94/139 (67%)
Frame = +2
Query: 17 IKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPD 196
+K F RF +Q P+ + + F +IS+ L A+ EEIK VWDC+ +KSPGPD
Sbjct: 53 VKKFFHNRFMEQHWERPLIEGVQFKQISDREKCQLTADIDLEEIKMAVWDCDSSKSPGPD 112
Query: 197 GFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISL 376
GFNF FI W +KED+ R + EFH NG + +G N +FI+LIPK+D P + ++RPISL
Sbjct: 113 GFNFKFIKSFWETVKEDIVRMMKEFHANGKLPKGTNSTFITLIPKVDDPQSLGDYRPISL 172
Query: 377 IGCIYKILSKILANRLSTI 433
+GC+YKIL+KILANRL +
Sbjct: 173 VGCLYKILAKILANRLKKV 191
>gb|KYP53426.1| Transposon TX1 uncharacterized [Cajanus cajan]
Length = 378
Score = 147 bits (370), Expect = 3e-40
Identities = 69/139 (49%), Positives = 94/139 (67%)
Frame = +2
Query: 17 IKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPD 196
+K F RF +Q P+ + + F +IS+ L A+ EEIK VWDC+ +KSPGPD
Sbjct: 91 VKKFFHNRFMEQHWERPLIEGVQFKQISDREKCQLTADIDLEEIKMAVWDCDSSKSPGPD 150
Query: 197 GFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISL 376
GFNF FI W +KED+ R + EFH NG + +G N +FI+LIPK+D P + ++RPISL
Sbjct: 151 GFNFKFIKSFWETVKEDIVRMMKEFHANGKLPKGTNSTFITLIPKVDDPQSLGDYRPISL 210
Query: 377 IGCIYKILSKILANRLSTI 433
+GC+YKIL+KILANRL +
Sbjct: 211 VGCLYKILAKILANRLKKV 229
>gb|KHM99257.1| Transposon TX1 putative 149 kDa protein, partial [Glycine soja]
Length = 135
Score = 139 bits (349), Expect = 9e-40
Identities = 63/120 (52%), Positives = 84/120 (70%)
Frame = +2
Query: 74 DKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPDGFNFGFI*ILWPVMKEDLN 253
D ++F + N+ L A F E EI+ VWDC +KSPGPDG NF FI W +K D+
Sbjct: 3 DGISFKSLDHQQNSMLVAPFQESEIQNAVWDCGNDKSPGPDGINFRFIKQFWDTLKHDIF 62
Query: 254 RCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISLIGCIYKILSKILANRLSTI 433
R ++EFH NG I RGCN SFI+LIPK+ +P + E+RPISLIGC+YKI++K+LANR+ +
Sbjct: 63 RYIHEFHANGAIPRGCNASFIALIPKISNPQHLGEYRPISLIGCMYKIVAKVLANRIRRV 122
>gb|KYP43067.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 915
Score = 150 bits (379), Expect = 2e-39
Identities = 75/138 (54%), Positives = 91/138 (65%)
Frame = +2
Query: 20 KNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPDG 199
K +F RF + P D F I+ D NN L F EEEIK VWDCE +K PGPDG
Sbjct: 172 KQYFCCRFEEHQENRPKLDGAQFNSITLDQNNMLTERFLEEEIKGVVWDCENSKCPGPDG 231
Query: 200 FNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISLI 379
FNF FI LW MK D+ R +NEFH NG + RG N +FISLIPK ++P + +FRPISL+
Sbjct: 232 FNFRFIKELWETMKGDICRFVNEFHQNGRLPRGSNSAFISLIPKKENPQHLGDFRPISLV 291
Query: 380 GCIYKILSKILANRLSTI 433
GC+YKIL+KILA RL +
Sbjct: 292 GCMYKILAKILARRLKRV 309
>gb|KYP51174.1| LINE-1 reverse transcriptase isogeny [Cajanus cajan]
Length = 355
Score = 144 bits (363), Expect = 2e-39
Identities = 68/139 (48%), Positives = 93/139 (66%)
Frame = +2
Query: 17 IKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPD 196
+KN F +RF+++ + P D + F +I+ + N L A+F EEE+K+ VWDC KSPGPD
Sbjct: 22 VKNFFSRRFSEKKWVRPSLDGVLFQQITREDNLMLVAKFDEEEVKEAVWDCASLKSPGPD 81
Query: 197 GFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISL 376
G NF FI W VMK++ L EFH G +RG N +FI+LIPK D P + ++RPISL
Sbjct: 82 GLNFKFIKAFWEVMKKEFLVFLEEFHTTGKFSRGTNPTFIALIPKGDDPRGLGDYRPISL 141
Query: 377 IGCIYKILSKILANRLSTI 433
+ CIYKI+SK+LA RL +
Sbjct: 142 VSCIYKIVSKVLARRLKKV 160
>gb|KYP32328.1| Transposon TX1 uncharacterized, partial [Cajanus cajan]
Length = 208
Score = 140 bits (352), Expect = 3e-39
Identities = 67/141 (47%), Positives = 90/141 (63%)
Frame = +2
Query: 11 KGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPG 190
KG + H +R P D + F ISE N L A F E+EI+ VW+C +K PG
Sbjct: 69 KGFQEHGNRR--------PTLDGVQFKSISEAQNEMLAAPFEEDEIRNAVWECGSSKCPG 120
Query: 191 PDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPI 370
PDGFNF FI W + D+ R ++EFH NG + RG N +FI+LIPK +P +E++RPI
Sbjct: 121 PDGFNFKFIKAFWETLSVDICRFMSEFHANGKLPRGSNSTFITLIPKKANPQNLEDYRPI 180
Query: 371 SLIGCIYKILSKILANRLSTI 433
SL+GC+YKILSK LANR++ +
Sbjct: 181 SLVGCMYKILSKFLANRINRV 201
>gb|KYP62678.1| Transposon TX1 uncharacterized, partial [Cajanus cajan]
Length = 324
Score = 143 bits (360), Expect = 3e-39
Identities = 66/143 (46%), Positives = 92/143 (64%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
+ + +K FE F + + P +F +SE+ L F +EE+K VWDCE K+
Sbjct: 128 IKEAVKGFFEGHFRECLHARPRLQDTDFKTLSEEDATTLILSFFDEEVKIAVWDCEGPKN 187
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDGFNF FI W +K D L+EFH NG + +G N SF+ L+PK D+P K+EE+R
Sbjct: 188 PGPDGFNFTFIKDFWDDIKADFLAFLHEFHANGKLVKGSNSSFVVLVPKTDNPQKVEEYR 247
Query: 365 PISLIGCIYKILSKILANRLSTI 433
PISLIGC+YK+L+K+LANR+ +
Sbjct: 248 PISLIGCMYKVLAKVLANRMKKV 270
>gb|KYP62659.1| Transposon TX1 uncharacterized, partial [Cajanus cajan]
Length = 333
Score = 143 bits (360), Expect = 4e-39
Identities = 66/143 (46%), Positives = 92/143 (64%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
+ + +K FE F + + P +F +SE+ L F +EE+K VWDCE K+
Sbjct: 137 IKEAVKGFFEGHFRECLHARPRLQDTDFKTLSEEDATTLILSFFDEEVKIAVWDCEGPKN 196
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDGFNF FI W +K D L+EFH NG + +G N SF+ L+PK D+P K+EE+R
Sbjct: 197 PGPDGFNFTFIKDFWDDIKADFLAFLHEFHANGKLVKGSNSSFVVLVPKTDNPQKVEEYR 256
Query: 365 PISLIGCIYKILSKILANRLSTI 433
PISLIGC+YK+L+K+LANR+ +
Sbjct: 257 PISLIGCMYKVLAKVLANRMKKV 279
>gb|KYP66721.1| Transposon TX1 uncharacterized [Cajanus cajan]
Length = 544
Score = 147 bits (370), Expect = 5e-39
Identities = 69/139 (49%), Positives = 94/139 (67%)
Frame = +2
Query: 17 IKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPD 196
+K F RF +Q P+ + + F +IS+ L A+ EEIK VWDC+ +KSPGPD
Sbjct: 314 VKKFFHNRFMEQHWERPLIEGVQFKQISDREKCQLTADIDLEEIKMAVWDCDSSKSPGPD 373
Query: 197 GFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISL 376
GFNF FI W +KED+ R + EFH NG + +G N +FI+LIPK+D P + ++RPISL
Sbjct: 374 GFNFKFIKSFWETVKEDIVRMMKEFHANGKLPKGTNSTFITLIPKVDDPQSLGDYRPISL 433
Query: 377 IGCIYKILSKILANRLSTI 433
+GC+YKIL+KILANRL +
Sbjct: 434 VGCLYKILAKILANRLKKV 452
>gb|KYP65910.1| Transposon TX1 uncharacterized [Cajanus cajan]
Length = 330
Score = 142 bits (358), Expect = 7e-39
Identities = 66/139 (47%), Positives = 92/139 (66%)
Frame = +2
Query: 17 IKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPD 196
+K+ F++RF +Q + P D + F ++ + N L A F+E EI+ VW+C K PGPD
Sbjct: 92 VKDFFQQRFQEQPQPRPALDGVRFKVLTSEQNELLIAPFTEVEIRSAVWECGSAKCPGPD 151
Query: 197 GFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISL 376
GFNF FI W + D+ R + EFHN G + RG N +FI+LIPK D P + ++RPISL
Sbjct: 152 GFNFRFIKEFWGTLGGDICRFMREFHNKGRLPRGTNSAFITLIPKRDDPRCLSDYRPISL 211
Query: 377 IGCIYKILSKILANRLSTI 433
+GC+YKILSK+LANRL +
Sbjct: 212 VGCMYKILSKVLANRLKRV 230
>gb|KYP32706.1| Transposon TX1 uncharacterized [Cajanus cajan]
Length = 1025
Score = 147 bits (370), Expect = 3e-38
Identities = 69/139 (49%), Positives = 94/139 (67%)
Frame = +2
Query: 17 IKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPD 196
+K F RF +Q P+ + + F +IS+ L A+ EEIK VWDC+ +KSPGPD
Sbjct: 286 VKKFFHNRFMEQHWERPLIEGVQFKQISDREKCQLTADIDLEEIKMAVWDCDSSKSPGPD 345
Query: 197 GFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISL 376
GFNF FI W +KED+ R + EFH NG + +G N +FI+LIPK+D P + ++RPISL
Sbjct: 346 GFNFKFIKSFWETVKEDIVRMMKEFHANGKLPKGTNSTFITLIPKVDDPQSLGDYRPISL 405
Query: 377 IGCIYKILSKILANRLSTI 433
+GC+YKIL+KILANRL +
Sbjct: 406 VGCLYKILAKILANRLKKV 424
>gb|KYP72533.1| Transposon TX1 uncharacterized [Cajanus cajan]
Length = 397
Score = 142 bits (358), Expect = 3e-38
Identities = 68/143 (47%), Positives = 97/143 (67%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
V + ++N+F+ RF++ P D + F +I+E N+ L F E +IK+ VW+C +KS
Sbjct: 223 VKEEVRNYFKDRFSEGGWRRPKMDSVVFNQITEADNDDLVKVFQESKIKEAVWECNGSKS 282
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDGFNF FI W +KED+ R +NEFH G + RG N SFI+L+PK P ++ E+R
Sbjct: 283 PGPDGFNFKFIKQCWDNLKEDIIRFINEFHTFGRLPRGSNPSFIALVPKKVDPQQLSEYR 342
Query: 365 PISLIGCIYKILSKILANRLSTI 433
PISLIGC+YKIL+K+LA R+ +
Sbjct: 343 PISLIGCMYKILAKLLAKRIKKV 365
>gb|KYP62677.1| Transposon TX1 uncharacterized [Cajanus cajan]
Length = 367
Score = 140 bits (354), Expect = 6e-38
Identities = 65/143 (45%), Positives = 91/143 (63%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
+ + +K FE F + + P +F +SE+ L F +EE+K VWDCE K+
Sbjct: 85 IKEAVKGFFEGHFRECLHARPRLQDTDFKTLSEEDATTLILSFFDEEVKIAVWDCEGPKN 144
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDGFNF FI W +K D L+EFH NG + +G N SF+ L+PK D+P K+EE+R
Sbjct: 145 PGPDGFNFTFIKDFWDDIKADFLAFLHEFHANGKLVKGSNSSFVVLVPKTDNPQKVEEYR 204
Query: 365 PISLIGCIYKILSKILANRLSTI 433
PI LIGC+YK+L+K+LANR+ +
Sbjct: 205 PIFLIGCMYKVLAKVLANRMKKV 227
>gb|KHN25562.1| LINE-1 reverse transcriptase like [Glycine soja]
Length = 1033
Score = 145 bits (366), Expect = 9e-38
Identities = 71/143 (49%), Positives = 91/143 (63%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
V + ++ F +RF + RI P D + F I N L F E+E+K+ VW+C +KS
Sbjct: 258 VKEAVRAFFSQRFQEATRIRPTLDGLRFQTIESYQNEMLVGRFQEDEVKRAVWNCGSDKS 317
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDG NF FI W +K D R L+EFH NG RG N SFI+LIPK+ P + E+R
Sbjct: 318 PGPDGINFKFIKQFWNTIKPDFLRFLDEFHVNGIFPRGSNASFIALIPKILDPQTLNEYR 377
Query: 365 PISLIGCIYKILSKILANRLSTI 433
PISLIGC+YKIL+KILANRL +
Sbjct: 378 PISLIGCMYKILAKILANRLKKV 400
>gb|KYP47722.1| Transposon TX1 uncharacterized, partial [Cajanus cajan]
Length = 248
Score = 135 bits (341), Expect = 4e-37
Identities = 65/143 (45%), Positives = 89/143 (62%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
+ +K+HFE+ F P ++F ++ L FS +E+K VWDCE KS
Sbjct: 52 IKHALKDHFERHFQDCKWNRPYFQGLDFKTLNPTELKMLIEPFSLQEVKAAVWDCENTKS 111
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDGFNF FI W +M+ D +FH +G + +G N SFI LIPK DS ++E++R
Sbjct: 112 PGPDGFNFYFIKDFWDIMQADFMSFFTDFHVHGRLVKGANNSFIVLIPKKDSAQRVEDYR 171
Query: 365 PISLIGCIYKILSKILANRLSTI 433
PISLIGC+YK+LSK+LANRL +
Sbjct: 172 PISLIGCMYKVLSKVLANRLRKV 194
>gb|KYP44439.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 1142
Score = 143 bits (361), Expect = 4e-37
Identities = 66/123 (53%), Positives = 89/123 (72%)
Frame = +2
Query: 65 PIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPDGFNFGFI*ILWPVMKE 244
P+ + + F +++ D + L F+ +E+K+ VWDCE NKSPGPDG NF FI W ++++
Sbjct: 333 PVLNGLVFKRLNLDQVDVLIKPFTLQEVKEAVWDCESNKSPGPDGINFHFIKDFWDMLQD 392
Query: 245 DLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISLIGCIYKILSKILANRL 424
D +NEFH+NG + RG N SFI L+PK D P +IEEFRPISLIGC+YK+LSKILANRL
Sbjct: 393 DFMLFINEFHSNGRLVRGLNSSFIVLVPKKDCPERIEEFRPISLIGCLYKVLSKILANRL 452
Query: 425 STI 433
+
Sbjct: 453 RMV 455
>gb|KYP65845.1| Transposon TX1 uncharacterized, partial [Cajanus cajan]
Length = 645
Score = 142 bits (358), Expect = 6e-37
Identities = 66/139 (47%), Positives = 92/139 (66%)
Frame = +2
Query: 17 IKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPD 196
+K+ F++RF +Q + P D + F ++ + N L A F+E EI+ VW+C K PGPD
Sbjct: 344 VKDFFQQRFQEQPQPRPALDGVRFKVLTSEQNELLIAPFTEVEIRSAVWECGSAKCPGPD 403
Query: 197 GFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISL 376
GFNF FI W + D+ R + EFHN G + RG N +FI+LIPK D P + ++RPISL
Sbjct: 404 GFNFRFIKKFWGTLGGDICRFMREFHNKGRLPRGTNSAFITLIPKRDDPRCLSDYRPISL 463
Query: 377 IGCIYKILSKILANRLSTI 433
+GC+YKILSK+LANRL +
Sbjct: 464 VGCMYKILSKVLANRLKRV 482
>gb|ABD32615.1| RNA-directed DNA polymerase , putative [Medicago truncatula]
Length = 422
Score = 139 bits (350), Expect = 7e-37
Identities = 66/140 (47%), Positives = 92/140 (65%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
+ + HF + F P +NF +S L FS +E K+ VWDC+ +KS
Sbjct: 26 IRNAVYAHFAEHFQSTNVERPSVANLNFRSLSVSEGVSLIKHFSVQENKEAVWDCDSDKS 85
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDG NFGFI W MK+++ R ++EFH NG +++G N +FI+LIPK+DSP K+ +FR
Sbjct: 86 PGPDGINFGFIKEFWIEMKDEIVRFVSEFHRNGKLSKGINTTFIALIPKVDSPQKLNDFR 145
Query: 365 PISLIGCIYKILSKILANRL 424
PISL+G +YKIL+K+LANRL
Sbjct: 146 PISLVGSLYKILAKLLANRL 165
>gb|KYP51227.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 448
Score = 139 bits (351), Expect = 7e-37
Identities = 64/143 (44%), Positives = 93/143 (65%)
Frame = +2
Query: 5 VTKGIKNHFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKS 184
+ + + +EK F ++ + F + ED L F+EEE+K VWDC+ +KS
Sbjct: 185 IKEAVTGFYEKYFEERSSNRLFLNDPTFKFLQEDEAASLILPFTEEEVKNAVWDCDRSKS 244
Query: 185 PGPDGFNFGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFR 364
PGPDGFNF FI W ++K D ++EFH G + +G N SF+ L+PK+D+P K+EE+R
Sbjct: 245 PGPDGFNFNFIKDFWEIIKYDFMAFIHEFHAYGKLVKGSNSSFVVLVPKIDNPQKVEEYR 304
Query: 365 PISLIGCIYKILSKILANRLSTI 433
PISLIGC+YK+L+K+LANRL +
Sbjct: 305 PISLIGCMYKVLAKLLANRLRIV 327
>gb|KYP52416.1| Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 299
Score = 136 bits (342), Expect = 9e-37
Identities = 68/136 (50%), Positives = 88/136 (64%)
Frame = +2
Query: 26 HFEKRFAKQIRIEPIRDKMNFTKISEDGNNFLEAEFSEEEIKKDVWDCEPNKSPGPDGFN 205
HFE F P + F +S++ + L FSEEE+K VWDC +KSP PDGFN
Sbjct: 138 HFEHHFMALPGRRPTLNGAYFKSLSQEEASNLIIPFSEEEVKVVVWDCGGSKSPSPDGFN 197
Query: 206 FGFI*ILWPVMKEDLNRCLNEFHNNGNITRGCNVSFISLIPKMDSPTKIEEFRPISLIGC 385
F FI W V+K D L EFH++G + +G N SFI LIPK+D P K+EE+RPISLIG
Sbjct: 198 FKFIQDFWDVLKTDFISFLYEFHSSGKLVKGSNSSFIVLIPKVDCPQKVEEYRPISLIGV 257
Query: 386 IYKILSKILANRLSTI 433
+YK+L+K+LANRL +
Sbjct: 258 MYKVLAKVLANRLRKV 273