BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00053926
         (496 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   131   1e-32
gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Ar...   131   2e-32
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              129   9e-32
emb|CDY58610.1| BnaCnng33390D [Brassica napus]                        128   2e-31
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   128   2e-31
ref|XP_012066667.1| PREDICTED: uncharacterized protein LOC105629...   125   7e-31
ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868...   126   1e-30
gb|AAT39281.2| Integrase core domain containing protein [Solanum...   124   5e-30
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...   123   1e-29
gb|KYP72819.1| Retrovirus-related Pol polyprotein from transposo...   122   3e-29
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]                    121   4e-29
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]                    121   4e-29
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   121   6e-29
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops...   121   6e-29
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                    121   6e-29
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    121   6e-29
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]                    121   6e-29
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|...   121   6e-29
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                    121   6e-29
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   120   1e-28

>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  131 bits (330), Expect = 1e-32
 Identities = 73/170 (42%), Positives = 101/170 (59%), Gaps = 10/170 (5%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           GPD+I LG+G+ L+ITH G + LP +     L+NVLC P ++ NLIS+SK CK++  S+E
Sbjct: 336 GPDDILLGDGSGLEITHTGSSKLPATSKSFCLSNVLCXPSIKQNLISVSKFCKTNNTSIE 395

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLP-------CPPQINFATLPLSLSD*HHRL 152
            FPS F++KDL+TG  L +G++  DVY  P P         P+    ++  SL++ HHRL
Sbjct: 396 FFPSSFVIKDLKTGARLTQGRSKDDVYEWPWPNKGNTLGTSPKQACVSVKTSLANWHHRL 455

Query: 151 GHPSNKTLRLLGXXXXXXXXXXXXFQ---CTSCHINKSHKLPFYGNSLVS 11
           GHPS++  + L             F    C SC  NKSHKLPF  +SL S
Sbjct: 456 GHPSSRIFQFLIRKHNLQIYPTESFHNFFCESCLCNKSHKLPFGVSSLRS 505


>gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
          Length = 1203

 Score =  131 bits (329), Expect = 2e-32
 Identities = 68/168 (40%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
 Frame = -1

Query: 496 HGGPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVS 317
           + G D + +G+G+ L ITH G  +LP+S  +L+L +VLCVP ++ NL+S+ +LC  + VS
Sbjct: 360 YNGQDAVLIGDGSGLSITHTGSLSLPSSSRNLALNSVLCVPNIQKNLVSVYRLCNQNNVS 419

Query: 316 VECFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINF---ATLPLSLSD*HHRLGH 146
           VE FP++F VKDL +G+  ++G+   ++Y  P       +F    T  LS +D HHRLGH
Sbjct: 420 VEFFPAHFQVKDLSSGVPFIQGKTKDELYEWPASPSTLTSFFASTTPKLSTTDWHHRLGH 479

Query: 145 PSNKTLRLLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
           PS   L  +               C+ C INK+HKLPF   S+VST P
Sbjct: 480 PSTTILHNIVSKFSLPCSRSVNNVCSDCAINKTHKLPFSQTSIVSTYP 527


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  129 bits (324), Expect = 9e-32
 Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 5/170 (2%)
 Frame = -1

Query: 496 HGGPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVS 317
           + G +E+ + +G++L ITH G +TL T    L+L N+L VP L  NLIS+ KLC +++VS
Sbjct: 447 YNGGEEVTIADGSTLPITHTGSSTLSTQSRSLALNNILYVPNLHKNLISVYKLCNANKVS 506

Query: 316 VECFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLP---LSLSD*HHRLGH 146
           VE FP++F VKDL TG  L++G+   ++Y  P+P    I+    P    +L   H RLGH
Sbjct: 507 VEFFPAHFQVKDLSTGARLLQGRTKDELYEWPVPSNTPISLFASPTPKTTLPSWHSRLGH 566

Query: 145 PSNKTLRLL--GXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
           PS   L+ L               F C+ C INKSHKLPFY N+++S  P
Sbjct: 567 PSPPVLKSLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTIISYTP 616


>emb|CDY58610.1| BnaCnng33390D [Brassica napus]
          Length = 856

 Score =  128 bits (321), Expect = 2e-31
 Identities = 70/170 (41%), Positives = 100/170 (58%), Gaps = 5/170 (2%)
 Frame = -1

Query: 496 HGGPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVS 317
           + G +E+ + +G+ L I+H G ++L T    L+L N+L VP L  NLIS+ +LC +++VS
Sbjct: 135 YNGGEEVVIADGSGLPISHTGSSSLTTPSRSLALNNILFVPNLHKNLISVYRLCNTNKVS 194

Query: 316 VECFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLP---LSLSD*HHRLGH 146
           VE FP++F VKDL TG  L++G+   ++Y  P+     I+    P    +LS  H RLGH
Sbjct: 195 VEFFPAHFQVKDLSTGARLLQGRTKDELYEWPVQTTRSISLFASPSPKTTLSSWHARLGH 254

Query: 145 PSNKTLRLLGXXXXXXXXXXXXFQ--CTSCHINKSHKLPFYGNSLVSTKP 2
           PSN  L+ L              Q  C+ C INKSHKLPFY N++ S KP
Sbjct: 255 PSNTVLQTLVSHFSLPLSTTSHKQSPCSHCLINKSHKLPFYSNTIHSQKP 304


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  128 bits (321), Expect = 2e-31
 Identities = 73/167 (43%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
 Frame = -1

Query: 496 HGGPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVS 317
           + G D+I + +G  L ITH G  +L TS    SLTNVLCVP ++ NLISISKL  S+ VS
Sbjct: 256 YNGSDDIMIDDGTGLPITHTGSLSLHTSNAQFSLTNVLCVPGMKKNLISISKLXISNNVS 315

Query: 316 VECFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSLSD*HHRLGHPSN 137
           +   PS FLVKDLRTG +L++G+    VY   L   P + F+++  S S+ HHRLGHP+ 
Sbjct: 316 ITFLPSSFLVKDLRTGATLLKGKTKDGVY-EWLVSSPLLAFSSVKTSSSEWHHRLGHPAF 374

Query: 136 KTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
             L+  +              F C +CH NKSHKL F  +++ S++P
Sbjct: 375 PILKHVISTNNLALSSSSLLHFSCNTCHCNKSHKLSFSNSTINSSRP 421


>ref|XP_012066667.1| PREDICTED: uncharacterized protein LOC105629661 [Jatropha curcas]
          Length = 515

 Score =  125 bits (314), Expect = 7e-31
 Identities = 59/112 (52%), Positives = 80/112 (71%)
 Frame = -1

Query: 496 HGGPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVS 317
           +GGPDE+ LG+G S  I+H G T++ T+   LSL ++LCVP L+ NL+SI+KLC+++ VS
Sbjct: 354 YGGPDEVFLGDGKSHSISHTGFTSINTASRILSLPDILCVPNLKRNLVSIAKLCRTNNVS 413

Query: 316 VECFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSLSD*H 161
           VE F +YFLVKDL TG  L+RG+N+ D+YCA     PQ+N  T   SLS  H
Sbjct: 414 VEFFATYFLVKDLSTGAPLLRGENIDDIYCATFSKRPQLNVTTKESSLSSLH 465


>ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
          Length = 2690

 Score =  126 bits (316), Expect = 1e-30
 Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
 Frame = -1

Query: 496  HGGPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVS 317
            + G +E+ + +G  L I+HIG   LPT  H   L +VL VP L  NL+S+ +LC +++VS
Sbjct: 1039 YNGGEEVTIADGTGLSISHIGSAILPTPSHSFPLRDVLYVPNLHKNLVSVYRLCNANQVS 1098

Query: 316  VECFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLP---LSLSD*HHRLGH 146
            VE FP++F VKDL TG  L++G+  +++Y  PLP      +   P    SL+  H RLGH
Sbjct: 1099 VEFFPAHFQVKDLSTGARLLQGKTKNELYEWPLPPTKITTYLASPSPKTSLASWHSRLGH 1158

Query: 145  PSNKTLR-LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
            PS   L+ L+             F C  C  NKSHKLPF+ N++ S KP
Sbjct: 1159 PSLPILKTLVSQFSLPISDSIKQFSCVDCLTNKSHKLPFHTNTIKSDKP 1207


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score =  124 bits (311), Expect = 5e-30
 Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           GP+EI +G+GN++ I+H G+T L  S     L N LC   ++ NL+S+SK C+ +  S+E
Sbjct: 334 GPEEIAMGDGNTIPISHTGNTNLSASNQQFKLLNTLCSHSIKNNLLSVSKFCRDNHTSIE 393

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPC---PPQINFATLPLSLSD*HHRLGHPS 140
            FP  + VKDL TG  L RGQN   +Y  PL      PQ N   +PL L   H RLGHP+
Sbjct: 394 FFPFSYCVKDLSTGAPLFRGQNRDGLYEWPLGSAHHTPQCN-VVVPLHLW--HRRLGHPN 450

Query: 139 NKTLRLLGXXXXXXXXXXXXFQ-CTSCHINKSHKLPFYGNSLVSTKP 2
           ++TL ++                C SC+ NK H+LPF  NSL S +P
Sbjct: 451 HRTLNMIFHQFSLPVSHSRTASICNSCYSNKMHRLPFSENSLQSQRP 497


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score =  123 bits (308), Expect = 1e-29
 Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G +++ + +G+ L I+H G   + T    L+LT+VL VP +  NLIS+ ++C +++VSVE
Sbjct: 313 GGEDVTIADGSGLSISHTGSALISTPSRSLALTDVLYVPNIHKNLISVYRMCNANKVSVE 372

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPL-PCPPQINFATL--PLSLSD*HHRLGHPS 140
            FP++F VKDL+TG+ L++G+   ++Y  P+ P  P  +F T      L+  H RLGHPS
Sbjct: 373 FFPAHFQVKDLKTGVQLLQGRTKDELYEWPVNPPKPSSHFTTTTPKTDLTSWHSRLGHPS 432

Query: 139 NKTLRLLGXXXXXXXXXXXXFQ--CTSCHINKSHKLPFYGNSLVSTKP 2
             TL+++              Q  C+ C +NK+HKLPF+ N++ ST+P
Sbjct: 433 LSTLKVVVSQFSLPVSNSLQKQFNCSDCLLNKTHKLPFHTNTITSTQP 480


>gb|KYP72819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 814

 Score =  122 bits (305), Expect = 3e-29
 Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + NG  L I H+G T + T    L LTNVL VP +  NLIS+S+LC+++ VS+ 
Sbjct: 26  GHDQLMVANGKGLPIKHLGSTNISTPSQSLQLTNVLHVPTVSHNLISVSQLCQTNDVSIA 85

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVY-CAPLPCPPQINFATLPLSLSD*HHRLGHPSNK 134
            FP +F VKDL+TG  L+RG+N  +VY   P   PPQ + A    S+   HHRLGH +++
Sbjct: 86  FFPWHFEVKDLQTGAILLRGRNEGNVYKLRPSLPPPQSHHAYSQPSIQLWHHRLGHLASR 145

Query: 133 TLRLLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
           TL                  C  C  NKSHKLPF+ +SL S+ P
Sbjct: 146 TLHHTLKANKLQHSPSSSSLCLDCLQNKSHKLPFHRSSLSSSVP 189


>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  121 bits (304), Expect = 4e-29
 Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L+ VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 354 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLSKVLYVPNINKNLISVYRLCNTNRVSVE 413

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 414 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 473

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 474 LAILNSFISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521


>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  121 bits (304), Expect = 4e-29
 Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L+ VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 354 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLSKVLYVPNINKNLISVYRLCNTNRVSVE 413

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 414 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 473

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 474 LAILNSFISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  121 bits (303), Expect = 6e-29
 Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L  VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 209 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVE 268

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 269 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 328

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 329 LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 376


>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
           gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
           transposon [Arabidopsis thaliana]
          Length = 1456

 Score =  121 bits (303), Expect = 6e-29
 Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L  VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 335 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVE 394

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 395 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 454

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 455 LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 502


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  121 bits (303), Expect = 6e-29
 Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L  VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 354 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNINKNLISVYRLCNTNRVSVE 413

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 414 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 473

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 474 LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  121 bits (303), Expect = 6e-29
 Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L  VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 354 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVE 413

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 414 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 473

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 474 LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521


>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  121 bits (303), Expect = 6e-29
 Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L  VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 354 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNINKNLISVYRLCNTNRVSVE 413

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 414 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 473

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 474 LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521


>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  121 bits (303), Expect = 6e-29
 Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L  VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 354 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVE 413

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 414 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 473

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 474 LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  121 bits (303), Expect = 6e-29
 Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 5/168 (2%)
 Frame = -1

Query: 490 GPDEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVE 311
           G D++ + +G+++ ITH G  +LPTS   L L  VL VP +  NLIS+ +LC ++RVSVE
Sbjct: 354 GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVE 413

Query: 310 CFPSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLPLSL---SD*HHRLGHPS 140
            FP+ F VKDL TG+ L++G+   ++Y  P+     ++    P S    S  H RLGHPS
Sbjct: 414 FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPS 473

Query: 139 NKTLR--LLGXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
              L   +                C+ C INKSHK+PF  +++ S+KP
Sbjct: 474 LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268438|emb|CAB80958.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1474

 Score =  120 bits (301), Expect = 1e-28
 Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
 Frame = -1

Query: 484 DEIHLGNGNSLQITHIGHTTLPTSRHDLSLTNVLCVPKLRTNLISISKLCKSSRVSVECF 305
           D++ + +G SL+IT  G T LP++  DL+L  VL VP ++ NL+S+ +LC +++VSVE F
Sbjct: 359 DDVMIADGTSLKITKTGSTFLPSNARDLTLNKVLYVPDIQKNLVSVYRLCNTNQVSVEFF 418

Query: 304 PSYFLVKDLRTGMSLMRGQNVHDVYCAPLPCPPQINFATLP---LSLSD*HHRLGHPSNK 134
           P+ F VKDL TG  L++G+   ++Y  P+  P      T P    +LS  H RLGHPS+ 
Sbjct: 419 PASFQVKDLNTGTLLLQGRTKDELYEWPVTNPKATALFTTPSPKTTLSSWHSRLGHPSSS 478

Query: 133 TLRLL--GXXXXXXXXXXXXFQCTSCHINKSHKLPFYGNSLVSTKP 2
            L  L                 C+ C INKSHKLPF  +S+ ST P
Sbjct: 479 ILNTLISKFSLPVSVSASNKLACSDCFINKSHKLPFSISSIKSTSP 524