BLASTX nr result

ID: Rehmannia28_contig00053908 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00053908
         (326 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KRX09566.1| Tubulin/FtsZ, C-terminal [Pseudocohnilembus persa...   179   8e-57
gb|KRY05134.1| Tubulin beta-2 chain [Trichinella patagoniensis]       180   1e-56
gb|AFK38702.1| unknown [Lotus japonicus]                              179   1e-56
gb|ADT65425.1| beta-tubulin [Ignatius tetrasporus]                    180   6e-56
ref|XP_006387233.1| hypothetical protein POPTR_1455s00210g [Popu...   178   6e-56
ref|XP_002764986.1| alpha-tubulin, putative [Perkinsus marinus A...   178   1e-55
ref|XP_002783956.1| alpha-tubulin, putative [Perkinsus marinus A...   178   1e-55
ref|XP_001433505.1| hypothetical protein [Paramecium tetraurelia...   179   2e-55
emb|CCC46463.1| putative beta tubulin, fragment [Trypanosoma viv...   176   2e-55
gb|ACF83522.1| unknown [Zea mays]                                     178   2e-55
gb|AFC01190.1| beta-tubulin, partial [Ammopiptanthus mongolicus]      176   2e-55
gb|KPP67375.1| Tubulin beta-4 chain-like [Scleropages formosus]       176   2e-55
ref|XP_008642261.1| PREDICTED: tubulin beta chain, partial [Corv...   176   2e-55
gb|AAH62532.1| TUBB protein [Homo sapiens] gi|649146952|gb|AIC61...   176   3e-55
ref|XP_002768411.1| alpha-tubulin, putative [Perkinsus marinus A...   178   3e-55
ref|XP_005244581.1| PREDICTED: tubulin beta chain, partial [Falc...   175   3e-55
ref|XP_002769207.1| alpha-tubulin, putative [Perkinsus marinus A...   178   4e-55
gb|AAO46135.1| beta-tubulin [Streblomastix strix]                     179   4e-55
gb|AAO46132.1| beta-tubulin [Streblomastix strix]                     179   4e-55
emb|CUG86593.1| beta tubulin, putative [Bodo saltans]                 176   4e-55

>gb|KRX09566.1| Tubulin/FtsZ, C-terminal [Pseudocohnilembus persalinus]
          Length = 114

 Score =  179 bits (455), Expect = 8e-57
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKSS+CDIPPKGLKMA TF+GNST+IQEMFKRV+EQFT MFRRKAFLHW
Sbjct: 9   SSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHW 68

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 69  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 97


>gb|KRY05134.1| Tubulin beta-2 chain [Trichinella patagoniensis]
          Length = 144

 Score =  180 bits (457), Expect = 1e-56
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+KSSVCDIPPKGLKMA+TFIGNSTSIQEMF+RVSEQFT MFRRKAFLHW
Sbjct: 39  SSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 98

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 99  YTGEGMDEMEFTEAESNMNDLVAEYQQYQ 127


>gb|AFK38702.1| unknown [Lotus japonicus]
          Length = 117

 Score =  179 bits (454), Expect = 1e-56
 Identities = 83/89 (93%), Positives = 88/89 (98%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+KSSVCDIPPKGLKM++TFIGNSTSIQEMF+RVSEQFT MFRRKAFLHW
Sbjct: 9   SSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 68

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 69  YTGEGMDEMEFTEAESNMNDLVAEYQQYQ 97


>gb|ADT65425.1| beta-tubulin [Ignatius tetrasporus]
          Length = 185

 Score =  180 bits (456), Expect = 6e-56
 Identities = 84/89 (94%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+KSSVCDIPPKGLKM+ TFIGNST+IQEMFKRVSEQFT MFRRKAFLHW
Sbjct: 80  SSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHW 139

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 140 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 168


>ref|XP_006387233.1| hypothetical protein POPTR_1455s00210g [Populus trichocarpa]
           gi|550305937|gb|ERP46147.1| hypothetical protein
           POPTR_1455s00210g [Populus trichocarpa]
          Length = 131

 Score =  178 bits (451), Expect = 6e-56
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+KSSVCDIPP+GL MA+TFIGNSTSIQEMF+RVSEQFT MFRRKAFLHW
Sbjct: 23  SSYFVEWIPNNVKSSVCDIPPRGLAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 82

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 83  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 111


>ref|XP_002764986.1| alpha-tubulin, putative [Perkinsus marinus ATCC 50983]
           gi|239864866|gb|EEQ97703.1| alpha-tubulin, putative
           [Perkinsus marinus ATCC 50983]
          Length = 150

 Score =  178 bits (451), Expect = 1e-55
 Identities = 83/89 (93%), Positives = 86/89 (96%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKS VCDIPPKGLKMA TF+GNST+IQEMFKRV+EQFT MFRRKAFLHW
Sbjct: 39  SSYFVEWIPNNIKSGVCDIPPKGLKMAVTFLGNSTAIQEMFKRVAEQFTAMFRRKAFLHW 98

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 99  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 127


>ref|XP_002783956.1| alpha-tubulin, putative [Perkinsus marinus ATCC 50983]
           gi|239896925|gb|EER15752.1| alpha-tubulin, putative
           [Perkinsus marinus ATCC 50983]
          Length = 157

 Score =  178 bits (451), Expect = 1e-55
 Identities = 83/89 (93%), Positives = 86/89 (96%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKS VCDIPPKGLKMA TF+GNST+IQEMFKRV+EQFT MFRRKAFLHW
Sbjct: 46  SSYFVEWIPNNIKSGVCDIPPKGLKMAVTFLGNSTAIQEMFKRVAEQFTAMFRRKAFLHW 105

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 106 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 134


>ref|XP_001433505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
           gi|124400623|emb|CAK66108.1| unnamed protein product
           [Paramecium tetraurelia]
          Length = 210

 Score =  179 bits (455), Expect = 2e-55
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKSS+CDIPPKGLKMA TF+GNST+IQEMFKRV+EQFT MFRRKAFLHW
Sbjct: 106 SSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHW 165

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 166 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 194


>emb|CCC46463.1| putative beta tubulin, fragment [Trypanosoma vivax Y486]
          Length = 122

 Score =  176 bits (447), Expect = 2e-55
 Identities = 82/89 (92%), Positives = 85/89 (95%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYF+EWIPNNIKSSVCDIPPKGLKMA TFIGN+T IQEMF+RV EQFT MFRRKAFLHW
Sbjct: 18  SSYFIEWIPNNIKSSVCDIPPKGLKMAVTFIGNNTCIQEMFRRVGEQFTAMFRRKAFLHW 77

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 78  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 106


>gb|ACF83522.1| unknown [Zea mays]
          Length = 178

 Score =  178 bits (452), Expect = 2e-55
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+KSSVCDIPP+GL MA+TFIGNSTSIQEMF+RVSEQFT MFRRKAFLHW
Sbjct: 72  SSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 131

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 132 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 160


>gb|AFC01190.1| beta-tubulin, partial [Ammopiptanthus mongolicus]
          Length = 123

 Score =  176 bits (447), Expect = 2e-55
 Identities = 82/89 (92%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+KS+VCDIPP GLKMA+TFIGNSTSIQEMF+RVSEQFT MFRRKAFLHW
Sbjct: 13  SSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHW 72

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEG+DEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 73  YTGEGVDEMEFTEAESNMNDLVSEYQQYQ 101


>gb|KPP67375.1| Tubulin beta-4 chain-like [Scleropages formosus]
          Length = 115

 Score =  176 bits (446), Expect = 2e-55
 Identities = 80/89 (89%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+K++VCDIPP+GLKMA TFIGNST+IQE+FKR+SEQFT MFRRKAFLHW
Sbjct: 9   SSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 68

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 69  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 97


>ref|XP_008642261.1| PREDICTED: tubulin beta chain, partial [Corvus brachyrhynchos]
          Length = 116

 Score =  176 bits (446), Expect = 2e-55
 Identities = 80/89 (89%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+K++VCDIPP+GLKMA TFIGNST+IQE+FKR+SEQFT MFRRKAFLHW
Sbjct: 10  SSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 69

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 70  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 98


>gb|AAH62532.1| TUBB protein [Homo sapiens] gi|649146952|gb|AIC61525.1| TUBB,
           partial [synthetic construct]
          Length = 124

 Score =  176 bits (446), Expect = 3e-55
 Identities = 80/89 (89%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+K++VCDIPP+GLKMA TFIGNST+IQE+FKR+SEQFT MFRRKAFLHW
Sbjct: 18  SSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 77

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 78  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 106


>ref|XP_002768411.1| alpha-tubulin, putative [Perkinsus marinus ATCC 50983]
           gi|239870834|gb|EER01129.1| alpha-tubulin, putative
           [Perkinsus marinus ATCC 50983]
          Length = 182

 Score =  178 bits (451), Expect = 3e-55
 Identities = 83/89 (93%), Positives = 86/89 (96%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKS VCDIPPKGLKMA TF+GNST+IQEMFKRV+EQFT MFRRKAFLHW
Sbjct: 72  SSYFVEWIPNNIKSGVCDIPPKGLKMAVTFLGNSTAIQEMFKRVAEQFTAMFRRKAFLHW 131

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 132 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 160


>ref|XP_005244581.1| PREDICTED: tubulin beta chain, partial [Falco peregrinus]
          Length = 96

 Score =  175 bits (443), Expect = 3e-55
 Identities = 79/89 (88%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNN+K++VCDIPP+GLKM+ TFIGNST+IQE+FKR+SEQFT MFRRKAFLHW
Sbjct: 1   SSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 60

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 61  YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 89


>ref|XP_002769207.1| alpha-tubulin, putative [Perkinsus marinus ATCC 50983]
           gi|239872485|gb|EER01925.1| alpha-tubulin, putative
           [Perkinsus marinus ATCC 50983]
          Length = 193

 Score =  178 bits (451), Expect = 4e-55
 Identities = 83/89 (93%), Positives = 86/89 (96%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKS VCDIPPKGLKMA TF+GNST+IQEMFKRV+EQFT MFRRKAFLHW
Sbjct: 83  SSYFVEWIPNNIKSGVCDIPPKGLKMAVTFLGNSTAIQEMFKRVAEQFTAMFRRKAFLHW 142

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 143 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 171


>gb|AAO46135.1| beta-tubulin [Streblomastix strix]
          Length = 217

 Score =  179 bits (453), Expect = 4e-55
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKS++CDIPPKGLKMA TFIGNST+IQE+FKRVSEQFT MFRRKAFLHW
Sbjct: 108 SSYFVEWIPNNIKSAICDIPPKGLKMAVTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 167

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 168 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 196


>gb|AAO46132.1| beta-tubulin [Streblomastix strix]
          Length = 217

 Score =  179 bits (453), Expect = 4e-55
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKS++CDIPPKGLKMA TFIGNST+IQE+FKRVSEQFT MFRRKAFLHW
Sbjct: 108 SSYFVEWIPNNIKSAICDIPPKGLKMAVTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 167

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 168 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 196


>emb|CUG86593.1| beta tubulin, putative [Bodo saltans]
          Length = 150

 Score =  176 bits (447), Expect = 4e-55
 Identities = 82/89 (92%), Positives = 85/89 (95%)
 Frame = -1

Query: 326 SSYFVEWIPNNIKSSVCDIPPKGLKMATTFIGNSTSIQEMFKRVSEQFTVMFRRKAFLHW 147
           SSYFVEWIPNNIKSS+CDIPPKGLKM+ TFIGN+T IQEMFKRV EQFT MFRRKAFLHW
Sbjct: 46  SSYFVEWIPNNIKSSICDIPPKGLKMSVTFIGNNTCIQEMFKRVGEQFTAMFRRKAFLHW 105

Query: 146 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 60
           YTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 106 YTGEGMDEMEFTEAESNMNDLVSEYQQYQ 134


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