BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00053802
         (441 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011100536.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   111   7e-26
gb|AAF69810.1| pol protein [Picea abies]                               97   6e-23
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         93   6e-21
gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyp...    97   1e-20
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    97   1e-20
dbj|BAG94808.1| unnamed protein product [Oryza sativa Japonica G...    92   1e-20
ref|XP_011075658.1| PREDICTED: uncharacterized protein LOC105160...    96   2e-20
gb|AAP54661.2| retrotransposon protein, putative, unclassified [...    96   3e-20
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    96   3e-20
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly...    96   3e-20
gb|ACB28472.1| polyprotein [Ananas comosus]                            96   3e-20
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    93   4e-20
gb|AAF69808.1| pol protein [Picea abies]                               89   4e-20
gb|AAP54937.2| retrotransposon protein, putative, unclassified [...    93   7e-20
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]      91   9e-20
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    94   9e-20
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]          92   9e-20
gb|AAF69806.1| pol protein [Picea abies]                               86   1e-19
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    92   1e-19
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]       87   2e-19

>ref|XP_011100536.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105178703
            [Sesamum indicum]
          Length = 966

 Score =  111 bits (278), Expect = 7e-26
 Identities = 49/115 (42%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +1

Query: 4    KWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADA 183
            KW++Y QGH F I+T+Q++LK+++DQRV + +QQ+W+TK+LGL Y++QYKKG EN  A+A
Sbjct: 826  KWKHYLQGHHFIIRTDQKSLKHILDQRVDSVLQQRWVTKLLGLSYEVQYKKGNENRAANA 885

Query: 184  LSRKDSETTFCG--DISTISPTWVKDVVDSYPQDPFFSKVLAANTLTLSTYPQFE 342
            LS+ +  +   G   IST  P W++++  SY +DP F  ++ A  +   ++P+++
Sbjct: 886  LSKVEHSSLEGGIHAISTQLPLWMQELQMSYKEDPLFQPIIQAKIIDNQSHPEYK 940


>gb|AAF69810.1| pol protein [Picea abies]
          Length = 148

 Score = 96.7 bits (239), Expect = 6e-23
 Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = +1

Query: 7   WRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADAL 186
           WR Y  G  F +KT+  +LKY ++QR+ +  QQKW+TKILG D++I YKKG +N+VADAL
Sbjct: 1   WRPYLIGRHFKVKTDHDSLKYFLEQRLSSEEQQKWVTKILGYDFEIVYKKGKQNVVADAL 60

Query: 187 SRKDSET-TFCGDISTISPTWVKDVVDSYPQD 279
           SRKD +   F   IS I P W+ +  D +  D
Sbjct: 61  SRKDEDVEAFLCAISIIQPDWIIEARDEWKND 92


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 93.2 bits (230), Expect(2) = 6e-21
 Identities = 46/101 (45%), Positives = 67/101 (66%)
 Frame = +1

Query: 1    QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
            +KWR+Y  G R  IKT+QQ+LK++M+QR++  +Q K + K++  DY I+YK G EN+VAD
Sbjct: 1033 KKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVAD 1092

Query: 181  ALSRKDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
            ALSR       C  I+T+ P WV+D+  SY  D    K+L+
Sbjct: 1093 ALSRIPPAEQ-CQAITTVIPEWVRDIQRSYEGDVQAHKILS 1132



 Score = 34.3 bits (77), Expect(2) = 6e-21
 Identities = 13/34 (38%), Positives = 25/34 (73%)
 Frame = +2

Query: 338  SKLQGQIRYKGRLAIGGKSELRKMILTAMHNSAY 439
            S+  G +RYKGR+ +G  +E+R+ ++ + H+SA+
Sbjct: 1145 SQEAGLLRYKGRIYVGENTEIREELIRSYHSSAF 1178


>gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group] gi|108706266|gb|ABF94061.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1159

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 47/100 (47%), Positives = 68/100 (68%)
 Frame = +1

Query: 4   KWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADA 183
           KWR Y Q   F IKT+ ++L +L DQ +   +QQK +TK++GL Y  QYK+G +NIVADA
Sbjct: 146 KWRCYLQRGPFIIKTDHKSLCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADA 205

Query: 184 LSRKDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
           LSR  S + FC  +S + P W+++V++SY  DP   ++LA
Sbjct: 206 LSRMPSSSQFCA-LSVVQPIWIQEVINSYTVDPQAQQLLA 244


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1    QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
            +KWR Y  GH F I+T+QQ+LKYL++Q++  P+QQ+WITK+LG ++ ++YK+G EN VAD
Sbjct: 863  KKWRSYLLGHNFKIQTDQQSLKYLLEQKMGTPLQQQWITKLLGYEFVVEYKQGKENKVAD 922

Query: 181  ALSRK--DSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVL 300
            ALSRK  D +      I+  + TW++ +  SY  DP   +++
Sbjct: 923  ALSRKMEDQKEGKLYAITAPANTWLEQLRTSYAIDPKLQQII 964


>dbj|BAG94808.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 218

 Score = 92.4 bits (228), Expect = 1e-20
 Identities = 49/115 (42%), Positives = 70/115 (60%)
 Frame = +1

Query: 4   KWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADA 183
           KWR Y Q + F I+TN ++L +L +Q++   MQ K   K++GL Y I+YK+GAEN VADA
Sbjct: 99  KWRAYLQNNEFVIQTNHKSLTHLGEQKLTTSMQHKAFIKLMGLQYKIRYKQGAENRVADA 158

Query: 184 LSRKDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLAANTLTLSTYPQFEIT 348
           LSR+D++      IS   P W++ VVD Y QD    ++LA   + L     F +T
Sbjct: 159 LSRRDADEELSA-ISVGRPKWLESVVDWYDQDEEAKQLLAQLIINLVGVEHFTLT 212


>ref|XP_011075658.1| PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
          Length = 1216

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
 Frame = +1

Query: 4    KWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADA 183
            +WR+Y  G+ F I+T+Q++LK+L+D R+ + +QQK +TK+LGL Y++ YKKG EN  ADA
Sbjct: 827  RWRHYLLGNHFIIRTDQKSLKHLLDLRIDSVLQQKGVTKLLGLSYEVHYKKGKENRAADA 886

Query: 184  LSRK--DSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLAANTLTLSTYPQF 339
            LSR+    E      IST  P W+++V  SY  +  F  ++ +  L  +++P +
Sbjct: 887  LSRRIYQEEDPQTHVISTQIPLWIQEVQLSYEGNTLFQTIIQSKILDTTSFPDY 940


>gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 760

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 46/100 (46%), Positives = 68/100 (68%)
 Frame = +1

Query: 4   KWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADA 183
           KWR Y Q   F IKT+ ++L +L D+ +   +QQK +TK++GL Y  QYK+G +NIVADA
Sbjct: 185 KWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADA 244

Query: 184 LSRKDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
           LSR  S + FC  +S + P W+++V++SY  DP   ++LA
Sbjct: 245 LSRMPSSSQFCA-LSVVQPIWIQEVINSYTVDPQAQQLLA 283


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 95.5 bits (236), Expect(2) = 3e-20
 Identities = 45/102 (44%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1    QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
            +KWR Y  GH F I+T+QQ+LKYL+++++  P+QQ+WITK+LG ++ ++YK+G EN VAD
Sbjct: 877  KKWRSYLLGHNFKIQTDQQSLKYLLEEKMGTPLQQQWITKLLGYEFVVEYKQGKENKVAD 936

Query: 181  ALSRK--DSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVL 300
            ALSRK  D +      I+  + TW++ +  SY  DP   +++
Sbjct: 937  ALSRKMEDQKEGKLYAITAPANTWLEQLRTSYAIDPKLQQII 978



 Score = 29.6 bits (65), Expect(2) = 3e-20
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 350  GQIRYKGRLAIGGKSELRKMILTAMHNS 433
            G + YKGRL I    ELR+ IL  +H+S
Sbjct: 996  GLLFYKGRLYIPASKELREQILYLLHSS 1023


>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group]
          Length = 921

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 46/100 (46%), Positives = 68/100 (68%)
 Frame = +1

Query: 4   KWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADA 183
           KWR Y Q   F IKT+ ++L +L D+ +   +QQK +TK++GL Y  QYK+G +NIVADA
Sbjct: 346 KWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADA 405

Query: 184 LSRKDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
           LSR  S + FC  +S + P W+++V++SY  DP   ++LA
Sbjct: 406 LSRMPSSSQFCA-LSVVQPIWIQEVINSYTVDPQAQQLLA 444


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 47/113 (41%), Positives = 69/113 (61%)
 Frame = +1

Query: 1   QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
           QKWR Y  G  F IKT+ Q+LKYLM+QRV  P QQKW+ K++G DY++ YKKG EN+VAD
Sbjct: 575 QKWRPYLIGRHFKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVAD 634

Query: 181 ALSRKDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLAANTLTLSTYPQF 339
           ALSR  +       +S I    +  +  S+  D    K++      ++++P++
Sbjct: 635 ALSRSPTLLA----VSAIHTDLLDQIKWSWNVDDKLKKIIQQKQSDINSWPRY 683


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 93.2 bits (230), Expect(2) = 4e-20
 Identities = 45/102 (44%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1    QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
            +KWR+Y  G    IKT+QQ+LK++M QR++  +Q K + K++  DY I+YK G EN+VAD
Sbjct: 1056 KKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVAD 1115

Query: 181  ALSRKDS-ETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
            ALSR  + +   C  I+ + P WV+D+  SY +D F  K+L+
Sbjct: 1116 ALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKILS 1157



 Score = 31.6 bits (70), Expect(2) = 4e-20
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 350  GQIRYKGRLAIGGKSELRKMILTAMHNSAY 439
            G ++YKGR+ +G  +E+R ++L A H S +
Sbjct: 1174 GLLKYKGRIYVGETTEIRMLLLEAYHASYF 1203


>gb|AAF69808.1| pol protein [Picea abies]
          Length = 147

 Score = 89.4 bits (220), Expect = 4e-20
 Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +1

Query: 7   WRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADAL 186
           WR Y  G  F +KT+  +LKY ++QR+ +  QQKW+TKIL  D++I YKK  + IVADAL
Sbjct: 1   WRPYLIGRHFKVKTDHDSLKYFLEQRLSSEEQQKWVTKILSYDFEIIYKKEKQTIVADAL 60

Query: 187 SRKDSET-TFCGDISTISPTWVKDVVDSYPQD 279
           SRKD +   F   IS I P W+ +  D +  D
Sbjct: 61  SRKDEDVEAFLCAISIIQPNWIIEARDEWKND 92


>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1477

 Score = 93.2 bits (230), Expect(2) = 7e-20
 Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
 Frame = +1

Query: 1    QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
            + WR Y Q   F I T+  +L +L DQR+  P QQK  TK+LGL Y I Y+KG+ N  AD
Sbjct: 942  EHWRSYLQHQEFMILTDHHSLTHLSDQRLHTPWQQKAFTKLLGLQYRIVYRKGSANSAAD 1001

Query: 181  ALSRKD-SETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLAANTL 315
            ALSRKD  ++     +S+ SP+W+++V+  Y QD F S++LA  +L
Sbjct: 1002 ALSRKDLGDSAQILAVSSCSPSWLQEVIQGYEQDKFSSQLLAELSL 1047



 Score = 30.8 bits (68), Expect(2) = 7e-20
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 347  QGQIRYKGRLAIGGKSELRKMILTAMHNS 433
            QG IRYKGR+ +G  ++L+  ++  +H++
Sbjct: 1059 QGLIRYKGRIWVGNNTDLQLKLIKELHDN 1087


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score = 90.5 bits (223), Expect(2) = 9e-20
 Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
 Frame = +1

Query: 1    QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
            +KWR+Y  G +  IKT+QQ+LK++M QR++  +Q K + K++  DY I+YK G EN+VAD
Sbjct: 918  KKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKENLVAD 977

Query: 181  ALSR---KDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
            ALSR   K++    C  ++ + P W+ D+  SY  D    K+L+
Sbjct: 978  ALSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQAHKILS 1021



 Score = 33.1 bits (74), Expect(2) = 9e-20
 Identities = 10/30 (33%), Positives = 23/30 (76%)
 Frame = +2

Query: 350  GQIRYKGRLAIGGKSELRKMILTAMHNSAY 439
            G ++YKGR+ +G  +++R+ ++T  H+S++
Sbjct: 1038 GLLKYKGRIYVGEATDIRRQLITTYHSSSF 1067


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 94.0 bits (232), Expect(2) = 9e-20
 Identities = 45/102 (44%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1    QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
            +KWR Y  GH F I+T+Q +LKYL++Q++  P+QQKWITK+LG ++ ++YK+G EN VAD
Sbjct: 910  KKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVAD 969

Query: 181  ALSRK--DSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVL 300
            ALSRK  D +      I+  + TW++ +   Y  DP   +++
Sbjct: 970  ALSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQII 1011



 Score = 29.6 bits (65), Expect(2) = 9e-20
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 350  GQIRYKGRLAIGGKSELRKMILTAMHNS 433
            G + YKGRL I    ELR+ IL  +H+S
Sbjct: 1029 GLLFYKGRLYIPASKELREQILYLLHSS 1056


>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
          Length = 394

 Score = 91.7 bits (226), Expect(2) = 9e-20
 Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
 Frame = +1

Query: 1   QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
           +KWR+Y  G +  IKT+QQ+LKY+M QR++  +Q K + K++  DY I+YK G EN+VAD
Sbjct: 8   KKWRHYVLGSKLIIKTDQQSLKYMMKQRLVEGIQHKLLLKLMEYDYKIEYKAGKENVVAD 67

Query: 181 ALSR---KDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
           ALSR    + +   C  I+ + P W++D+ +SY  D    K+L+
Sbjct: 68  ALSRLPQTEHDNEDCQAITVVIPEWIQDIQNSYEGDIQAHKMLS 111



 Score = 32.0 bits (71), Expect(2) = 9e-20
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 350 GQIRYKGRLAIGGKSELRKMILTAMHNSAY 439
           G +RYKGR+ +G  + +R ++L   H+SA+
Sbjct: 128 GILRYKGRIYVGDSNSIRTILLQDYHSSAF 157


>gb|AAF69806.1| pol protein [Picea abies]
          Length = 83

 Score = 86.3 bits (212), Expect = 1e-19
 Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
 Frame = +1

Query: 7   WRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADAL 186
           WR Y  G  F +K +  +LKY ++QR+ +  QQKW+TKILG D++I YKKG  N+VADAL
Sbjct: 1   WRPYLIGRHFKVKIDHDSLKYFLEQRLSSEEQQKWVTKILGYDFEIVYKKGEPNVVADAL 60

Query: 187 SRKDSETTFCGDISTIS-PTWV 249
           SRKD +      +S  S P+W+
Sbjct: 61  SRKDEDVXAFSVLSRXSNPSWI 82


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 955

 Score = 92.4 bits (228), Expect(2) = 1e-19
 Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
 Frame = +1

Query: 1   QKWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVAD 180
           ++WR+Y  G    IKT+QQ+LKY+M+QR++  +Q K + K++  +Y I+YK G EN+VAD
Sbjct: 397 KRWRHYVLGGELVIKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYTIEYKAGRENLVAD 456

Query: 181 ALSR----KDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLA 303
           ALSR    K+  T  C  I+ + P W+ D+  SY +D    K+L+
Sbjct: 457 ALSRSPKNKEEVTELCAAIAVVVPEWILDIKRSYEEDVQAHKLLS 501



 Score = 30.4 bits (67), Expect(2) = 1e-19
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 350 GQIRYKGRLAIGGKSELRKMILTAMHNSAY 439
           G ++YKGR+ +G   E+R  ++ A H+S +
Sbjct: 518 GIMKYKGRIYVGETGEIRGQLIQAYHSSTF 547


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score = 87.0 bits (214), Expect(2) = 2e-19
 Identities = 47/114 (41%), Positives = 66/114 (57%)
 Frame = +1

Query: 4    KWRYYSQGHRFTIKTNQQALKYLMDQRVMNPMQQKWITKILGLDYDIQYKKGAENIVADA 183
            +WR Y Q   F I T+ ++L  L +QR+    QQK  TK+ GL Y I Y+KG +N  ADA
Sbjct: 989  QWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADA 1048

Query: 184  LSRKDSETTFCGDISTISPTWVKDVVDSYPQDPFFSKVLAANTLTLSTYPQFEI 345
            LSRK  E + C  IS   PTW+++VV+ Y +DP   ++LA   L  +    F +
Sbjct: 1049 LSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSL 1102



 Score = 35.4 bits (80), Expect(2) = 2e-19
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +2

Query: 332  PSSKLQGQIRYKGRLAIGGKSELRKMILTAMHNSA 436
            P S  QG IR+K R+ +GG  +L++ +L AMH++A
Sbjct: 1099 PFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTA 1133