BLASTX nr result
ID: Rehmannia28_contig00053750
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00053750
(308 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera] 77 2e-14
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 71 2e-12
gb|KYP72724.1| Retrovirus-related Pol polyprotein from transposo... 71 3e-12
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 70 4e-12
ref|XP_012481063.1| PREDICTED: uncharacterized protein LOC105795... 69 2e-11
gb|KYP74197.1| Retrovirus-related Pol polyprotein from transposo... 68 2e-11
ref|XP_012487714.1| PREDICTED: uncharacterized protein LOC105800... 67 4e-11
gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposo... 67 4e-11
gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposo... 67 4e-11
ref|XP_013700581.1| PREDICTED: uncharacterized protein LOC106404... 67 6e-11
ref|XP_010414406.1| PREDICTED: uncharacterized protein LOC104700... 67 8e-11
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 66 1e-10
gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposo... 64 2e-10
gb|KYP31892.1| Retrovirus-related Pol polyprotein from transposo... 65 2e-10
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 65 2e-10
gb|KYP62834.1| Retrovirus-related Pol polyprotein from transposo... 65 3e-10
gb|EMS54188.1| Putative late blight resistance protein-like prot... 65 3e-10
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643... 65 3e-10
gb|KYP40139.1| Retrovirus-related Pol polyprotein from transposo... 64 5e-10
gb|KYP40130.1| Retrovirus-related Pol polyprotein from transposo... 64 5e-10
>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
Length = 1099
Score = 77.0 bits (188), Expect = 2e-14
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 30/132 (22%)
Frame = -2
Query: 307 GLYQLDLSSLHT-------------------QRSASLHPSP---VNFSNSAHIAISDV-- 200
GLY L+LS + T ++AS H S V+F N +H + ++
Sbjct: 230 GLYHLELSPIRTTQAFLAYSSQPGSCSSCFYNKTASCHSSMACNVSFPNKSHXSCNNSVV 289
Query: 199 ------NLWHKRLGHCSSAVLNNVLKQINVSHSSSHLDFCHACQLGKLKSVSFPPVESKS 38
+LWH RLGH S +VLN +L +++S SSH FC AC+LGKL SF V K+
Sbjct: 290 QDSXVKSLWHNRLGHPSXSVLNKILHSMSIS-PSSHQMFCDACKLGKLHQESFLSVAVKT 348
Query: 37 TAPFQLVYSDVW 2
P QL++ DVW
Sbjct: 349 NKPLQLIHLDVW 360
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 71.2 bits (173), Expect = 2e-12
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = -2
Query: 208 SDVNLWHKRLGHCSSAVLNNVL--KQINVSHSSSHLDFCHACQLGKLKSVSFPPVESKST 35
++ + WH RLGH SS + N++ +++V SS+ L+FC ACQLGK K + FP +S+
Sbjct: 455 ANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSS 514
Query: 34 APFQLVYSDVW 2
P L++SDVW
Sbjct: 515 VPLALIHSDVW 525
>gb|KYP72724.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1282
Score = 70.9 bits (172), Expect = 3e-12
Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Frame = -2
Query: 289 LSSLHTQRSASLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQINVSHSSS- 113
L L + S SL P P NSAHI D LWHKRLGH SS VL+ +LK + + +S
Sbjct: 355 LFPLQSSLSPSL-PLPFVSCNSAHI---DYQLWHKRLGHPSSNVLHVILKSGFLGNKNSP 410
Query: 112 -----HLDFCHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
H D C C+LGK K++ FP +S PF +++SDVW
Sbjct: 411 PLHAVHFD-CIPCKLGKSKTLPFPTHQSNVRKPFDMIHSDVW 451
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 70.5 bits (171), Expect = 4e-12
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRSASLHPSPVNFSNSAHIAI------SDVNLWHKRLGHCSSAVLNNV 146
GLY D S L + + SL SP ++S + S +LWHKRLGH S+A + NV
Sbjct: 480 GLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNV 539
Query: 145 LKQINVSH-SSSHLDFCHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
L + NV+H + +FC +C LGK+ F + T P +L++ D+W
Sbjct: 540 LSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLW 588
>ref|XP_012481063.1| PREDICTED: uncharacterized protein LOC105795961 [Gossypium
raimondii]
Length = 501
Score = 68.6 bits (166), Expect = 2e-11
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRSASLHPSPVNFS----NSAHIAISDVNLWHKRLGHCSSAVLNNVLK 140
GLY+ D+S + + S +FS N+A + S +WH RLGH + +L++VL+
Sbjct: 325 GLYRFDVSHGDSIKIPSKLIGAQSFSSAQLNNAQLISSSAVIWHARLGHPCNNILSHVLR 384
Query: 139 QINVSHSSSHL-DFCHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
NV L C +CQLGK + FP ++ ++PF+LV SDVW
Sbjct: 385 TFNVPFKQDSLPSVCSSCQLGKAHKLHFPHSKTVYSSPFELVVSDVW 431
>gb|KYP74197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 455
Score = 68.2 bits (165), Expect = 2e-11
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = -2
Query: 196 LWHKRLGHCSSAVLNNVLKQINVS---HSSSHLDFCHACQLGKLKSVSFPPVESKSTAPF 26
+WH RLGHC++ ++ +VLKQ N+S H ++ + C +C LGK+ SFP ++ T P
Sbjct: 126 IWHSRLGHCANKIVKHVLKQCNISIPLHDNATM--CGSCCLGKMHKSSFPISKTVYTQPL 183
Query: 25 QLVYSDVW 2
QLVYSD+W
Sbjct: 184 QLVYSDIW 191
>ref|XP_012487714.1| PREDICTED: uncharacterized protein LOC105800896 [Gossypium
raimondii]
Length = 296
Score = 67.0 bits (162), Expect = 4e-11
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRSA-----SLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVL 143
GLYQ DLS + +A ++H + + S +S +LWHKRLGH + + +VL
Sbjct: 32 GLYQFDLSDTQSCTAALASYTTVHTTSLELPGSN---VSFFDLWHKRLGHPCNKTIMSVL 88
Query: 142 KQINVSHSSSHLD-FCHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
++ N++ S ++ C ACQLGK + F P + TA F+L+ SD+W
Sbjct: 89 QKCNLASKVSMMNSICSACQLGKFYKLPFSPSTTVYTALFELLVSDLW 136
>gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 562
Score = 67.4 bits (163), Expect = 4e-11
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = -2
Query: 196 LWHKRLGHCSSAVLNNVLKQINVS---HSSSHLDFCHACQLGKLKSVSFPPVESKSTAPF 26
+WH RLGHC++ ++ +VLKQ N+S H ++ + C +C LGK+ SF ES T P
Sbjct: 438 IWHSRLGHCANKIVKHVLKQCNISVPLHDNATV--CGSCCLGKMHKSSFSISESVYTEPL 495
Query: 25 QLVYSDVW 2
QLVYSD+W
Sbjct: 496 QLVYSDIW 503
>gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 660
Score = 67.4 bits (163), Expect = 4e-11
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = -2
Query: 196 LWHKRLGHCSSAVLNNVLKQINVS---HSSSHLDFCHACQLGKLKSVSFPPVESKSTAPF 26
+WH RLGHC++ ++ +VLKQ N+S H ++ + C +C LGK+ SF ES T P
Sbjct: 268 IWHSRLGHCANKIVKHVLKQCNISVPLHDNATV--CGSCCLGKMHKSSFSISESVYTEPL 325
Query: 25 QLVYSDVW 2
QLVYSD+W
Sbjct: 326 QLVYSDIW 333
>ref|XP_013700581.1| PREDICTED: uncharacterized protein LOC106404404 [Brassica napus]
Length = 575
Score = 67.0 bits (162), Expect = 6e-11
Identities = 38/101 (37%), Positives = 55/101 (54%)
Frame = -2
Query: 304 LYQLDLSSLHTQRSASLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQINVS 125
LY LD S+ S P + SA++ + ++WH+RLGH SS+VLNN+ +
Sbjct: 471 LYILDTSASTLVSLPSPSSVPASLCGSAYV---EEHVWHQRLGHPSSSVLNNISSHLPSF 527
Query: 124 HSSSHLDFCHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
S+SH CH C L K K ++F + S PF LV+ D+W
Sbjct: 528 SSTSH---CHVCPLAKQKRLAFISNNTLSENPFDLVHLDIW 565
>ref|XP_010414406.1| PREDICTED: uncharacterized protein LOC104700576 isoform X1
[Camelina sativa]
Length = 473
Score = 66.6 bits (161), Expect = 8e-11
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = -2
Query: 259 SLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQINVSHSSSHLDFCHACQLG 80
S H S ++FS S ++D +LWHKRLGH SSA L + + ++ SS + C C L
Sbjct: 336 STHISSMHFSGSL---LADGDLWHKRLGHPSSAKLQELSGTLPITKSSLAMSHCSVCHLA 392
Query: 79 KLKSVSFPPVESKSTAPFQLVYSDVW 2
K K +SF + + PF+LV+ D+W
Sbjct: 393 KQKRLSFESNNNFTKTPFELVHMDIW 418
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1165
Score = 66.2 bits (160), Expect = 1e-10
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRSASLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQINV 128
GLYQL S T + H+ S WH++LGH +S VLN V+K N+
Sbjct: 342 GLYQLPGGSTSTNKRP-------------HVFFSIKETWHRKLGHPNSKVLNEVMKLCNI 388
Query: 127 SHSS-SHLDFCHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
S + +FC ACQ GK ++ F S + P LV+SDVW
Sbjct: 389 EASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVW 431
>gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 201
Score = 63.9 bits (154), Expect = 2e-10
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -2
Query: 235 FSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQINVS-HSSSHLDFCHACQLGKLKSVSF 59
FS S A S LWH RLGH S ++N VLK N+ +S FC +C +GK + F
Sbjct: 25 FSTSKGSAHSSFQLWHSRLGHPSPRIVNTVLKSCNMPIAKNSDSFFCQSCCMGKSHQLPF 84
Query: 58 PPVESKSTAPFQLVYSDVW 2
++ T+P +L+YSD+W
Sbjct: 85 IDSKTVYTSPLELIYSDIW 103
>gb|KYP31892.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 264
Score = 64.7 bits (156), Expect = 2e-10
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRSASLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQINV 128
GLYQL L T+R A++++ + WH+RLGH ++ L+ VLK NV
Sbjct: 11 GLYQL----LRTERDPC-----------AYVSVKES--WHRRLGHPNNKFLDRVLKSCNV 53
Query: 127 SHS-SSHLDFCHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
S S H +FC ACQ GK+ + F S + F+LV++DVW
Sbjct: 54 KLSPSDHFNFCEACQYGKMHFLPFKTSSSHAKEIFELVHTDVW 96
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 65.5 bits (158), Expect = 2e-10
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 34/136 (25%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRS--------------ASLHPSPVNFSNSAHIA-------------- 212
GLYQLD+S + + R + PS VN + A
Sbjct: 375 GLYQLDISKVSSNRQFVGFSEDTNVFLPHLATTPSTVNKQSVAPSVGYSLQVNKIESTRC 434
Query: 211 ISDVN-----LWHKRLGHCSSAVLNNVLKQINV-SHSSSHLDFCHACQLGKLKSVSFPPV 50
+ D N LWH+RLGH + +++ VL ++ + S + L+FC AC LGK K P
Sbjct: 435 VEDNNTGVGHLWHQRLGHPCNKIVSLVLDRLGIKSKLQNELNFCTACPLGKAKQFPLPTT 494
Query: 49 ESKSTAPFQLVYSDVW 2
+K+ PF+LV+SDVW
Sbjct: 495 INKTQVPFELVFSDVW 510
>gb|KYP62834.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 396
Score = 65.1 bits (157), Expect = 3e-10
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Frame = -2
Query: 259 SLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQ--INVSHSSS----HLDFC 98
SL PS S + AI D +WH+RLGH +S VL+++LK + H+ S H D C
Sbjct: 212 SLSPSLSLPLVSCNSAIVDYQVWHRRLGHPNSNVLHDMLKSSFLGNKHTPSLNDIHFD-C 270
Query: 97 HACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
C+LGK K + FP +S T PF +++SDVW
Sbjct: 271 IPCKLGKSKILPFPTHQSHVTQPFDIIHSDVW 302
>gb|EMS54188.1| Putative late blight resistance protein-like protein R1B-14
[Triticum urartu]
Length = 770
Score = 65.1 bits (157), Expect = 3e-10
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = -2
Query: 232 SNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQINVSHSSSHLD--FCHACQLGKLKSVSF 59
S+S+H ++ V LWH+RLGH S +L++ + + D CHACQ+GK + F
Sbjct: 545 SSSSHAMLASVGLWHRRLGHPHSGTTTTLLREFQLPYDRDSHDPSLCHACQMGKHVHLPF 604
Query: 58 PPVESKSTAPFQLVYSDVW 2
++S+ PF+L++ D+W
Sbjct: 605 GTSSTRSSFPFELLHCDLW 623
>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
Length = 1003
Score = 65.1 bits (157), Expect = 3e-10
Identities = 28/64 (43%), Positives = 38/64 (59%)
Frame = -2
Query: 193 WHKRLGHCSSAVLNNVLKQINVSHSSSHLDFCHACQLGKLKSVSFPPVESKSTAPFQLVY 14
WH LGH ++ ++K N+ SS + C AC LGKL +S VE KST PFQ+++
Sbjct: 470 WHSALGHPHRRTVSKIIKDFNLPCSSFQFNPCSACNLGKLSRLSLASVEHKSTGPFQIIH 529
Query: 13 SDVW 2
SD W
Sbjct: 530 SDFW 533
>gb|KYP40139.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] gi|1012328504|gb|KYP40141.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Cajanus cajan]
Length = 300
Score = 63.9 bits (154), Expect = 5e-10
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRSASLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQ--I 134
GL L +H S SL V S + I D +WH+RLGH +S VL+++LK +
Sbjct: 115 GLQVRRLFPIHFSLSPSLSLPLV----SCNFVIVDYQVWHRRLGHPNSNVLHDMLKYGFL 170
Query: 133 NVSHSSSHLDF---CHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
H+ S D C C+LGK K + FP +S T PF +++SDVW
Sbjct: 171 GNKHTPSLNDIHFHCIPCKLGKSKILPFPTHQSHVTQPFDIIHSDVW 217
>gb|KYP40130.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 300
Score = 63.9 bits (154), Expect = 5e-10
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = -2
Query: 307 GLYQLDLSSLHTQRSASLHPSPVNFSNSAHIAISDVNLWHKRLGHCSSAVLNNVLKQ--I 134
GL L +H S SL V S + I D +WH+RLGH +S VL+++LK +
Sbjct: 115 GLQVRRLFPIHFSLSPSLSLPLV----SCNFVIVDYQVWHRRLGHPNSNVLHDMLKYGFL 170
Query: 133 NVSHSSSHLDF---CHACQLGKLKSVSFPPVESKSTAPFQLVYSDVW 2
H+ S D C C+LGK K + FP +S T PF +++SDVW
Sbjct: 171 GNKHTPSLNDIHFHCIPCKLGKSKILPFPTHQSHVTQPFDIIHSDVW 217