BLASTX nr result
ID: Rehmannia28_contig00053742
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00053742
(402 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010695863.1| PREDICTED: uncharacterized protein LOC104908... 70 1e-11
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 70 1e-11
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 70 1e-11
ref|XP_008779617.1| PREDICTED: uncharacterized protein LOC103699... 70 1e-11
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 70 2e-11
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 70 2e-11
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 70 2e-11
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 70 2e-11
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 70 2e-11
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 70 2e-11
ref|XP_010692461.1| PREDICTED: uncharacterized protein LOC104905... 70 2e-11
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group] 69 4e-11
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group] 69 4e-11
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-... 68 7e-11
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 68 7e-11
ref|XP_013745866.1| PREDICTED: uncharacterized protein LOC106448... 68 1e-10
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group] 68 1e-10
emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera] 67 1e-10
emb|CAN79395.1| hypothetical protein VITISV_010430 [Vitis vinifera] 67 1e-10
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 67 2e-10
>ref|XP_010695863.1| PREDICTED: uncharacterized protein LOC104908445 [Beta vulgaris
subsp. vulgaris]
Length = 811
Score = 70.1 bits (170), Expect = 1e-11
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFNVVSLKKKLL 145
PSTFMRLMNQVL+PF G FV+VYFDDILIYS+D + H V+ KLL
Sbjct: 642 PSTFMRLMNQVLRPFTGSFVIVYFDDILIYSKDNKDHLEHVTQVLKLL 689
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 70.1 bits (170), Expect = 1e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 181 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 219
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 70.1 bits (170), Expect = 1e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 212 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 250
>ref|XP_008779617.1| PREDICTED: uncharacterized protein LOC103699371, partial [Phoenix
dactylifera]
Length = 1033
Score = 70.1 bits (170), Expect = 1e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 704 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 742
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 70.1 bits (170), Expect = 2e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 827 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 865
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 70.1 bits (170), Expect = 2e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 1181 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 1219
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 70.1 bits (170), Expect = 2e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 1190 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 1228
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 70.1 bits (170), Expect = 2e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 942 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 980
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 70.1 bits (170), Expect = 2e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 684 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 722
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 70.1 bits (170), Expect = 2e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 848 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 886
>ref|XP_010692461.1| PREDICTED: uncharacterized protein LOC104905571 [Beta vulgaris
subsp. vulgaris]
Length = 942
Score = 69.7 bits (169), Expect = 2e-11
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFNVVS 127
PSTFMRLMNQVL+PF G FVVVYFDDILIYS+DK+ H V+
Sbjct: 744 PSTFMRLMNQVLRPFTGSFVVVYFDDILIYSKDKKEHLEHVA 785
>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
Length = 1667
Score = 68.9 bits (167), Expect = 4e-11
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
P+TFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 771 PTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 809
>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
Length = 1667
Score = 68.9 bits (167), Expect = 4e-11
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
P+TFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 771 PTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 809
>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class, partial
[Oryza sativa Japonica Group]
Length = 1238
Score = 68.2 bits (165), Expect = 7e-11
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLM++VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 712 PSTFMRLMSEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 750
>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550404|gb|ABA93201.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1297
Score = 68.2 bits (165), Expect = 7e-11
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFN 118
PSTFMRLM++VL+PFIGKFVVVYFDDILIYS+ HFN
Sbjct: 734 PSTFMRLMSEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 772
>ref|XP_013745866.1| PREDICTED: uncharacterized protein LOC106448544 [Brassica napus]
Length = 1018
Score = 67.8 bits (164), Expect = 1e-10
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFNVVSL 130
PSTFMR+MNQ L+PFIGKFVVVYFDDILI+S+ TH N + L
Sbjct: 761 PSTFMRIMNQALRPFIGKFVVVYFDDILIFSDSLATHVNHLRL 803
>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
Length = 1431
Score = 67.8 bits (164), Expect = 1e-10
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHF 115
PSTFMRLMN+VL+PFIGKFVVVYFDDILIYS+ HF
Sbjct: 793 PSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHF 830
>emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera]
Length = 605
Score = 67.4 bits (163), Expect = 1e-10
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFNVVSLKKKLLPL 151
PSTFMRLMNQVL FIGKFVVVYFDDILIYS+D+ H + L++ LL L
Sbjct: 319 PSTFMRLMNQVLHSFIGKFVVVYFDDILIYSKDEEEHLS--HLREVLLAL 366
>emb|CAN79395.1| hypothetical protein VITISV_010430 [Vitis vinifera]
Length = 391
Score = 67.0 bits (162), Expect = 1e-10
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFNVVSLKKKLLPL 151
PSTFM+LMNQVL+ FIGKFVVVYFDDILIYS+D+ H + L++ LL L
Sbjct: 98 PSTFMQLMNQVLRSFIGKFVVVYFDDILIYSKDEEEHLS--HLREVLLAL 145
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 67.0 bits (162), Expect = 2e-10
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +2
Query: 2 PSTFMRLMNQVLKPFIGKFVVVYFDDILIYSEDKRTHFNVVSLKKKLLPL 151
PSTFMRLMN VL+ FIGKFVVVYFDDILIYS+D + H ++ LK+ L L
Sbjct: 791 PSTFMRLMNHVLRNFIGKFVVVYFDDILIYSKDPQKH--IIHLKEVFLVL 838