BLASTX nr result
ID: Rehmannia28_contig00053549
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00053549
(821 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 194 1e-54
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo... 189 2e-53
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 186 3e-53
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 186 3e-53
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo... 189 2e-52
ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415... 176 5e-52
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo... 189 3e-51
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo... 177 5e-51
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo... 183 7e-51
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 188 1e-50
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 181 4e-50
gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposo... 186 5e-50
gb|KYP50090.1| Retrovirus-related Pol polyprotein from transposo... 177 3e-49
gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposo... 171 4e-49
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo... 177 4e-48
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo... 177 4e-48
gb|KYP43795.1| Retrovirus-related Pol polyprotein from transposo... 177 4e-47
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 168 1e-46
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 168 1e-46
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178... 169 2e-44
>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1268
Score = 194 bits (492), Expect(2) = 1e-54
Identities = 109/253 (43%), Positives = 141/253 (55%), Gaps = 20/253 (7%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
+TLL ASLPL++W AFSTA Y INRLP++ L PF L+ PDY FLK FGC CF
Sbjct: 590 ITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVLFKQTPDYKFLKTFGCACF 649
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
PFLRPY +HKL FRS +CVFLGYS SHKGY+CLS+SGK+++++ V FNE+ FPY+ LF
Sbjct: 650 PFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLF-- 707
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCSN------PDIXXXXXXXXXXXXXXXXXXXXPQTSN 300
CS+ P I N
Sbjct: 708 QHTSTPVPSPSQYFTLNPDLSPPCSHTTASSLPFIPVSETSNHSGQDNILSVSPTVSQFN 767
Query: 299 S-PSAP-------------HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHW 162
S PS+P + H+M TRSK+GI+KPK+ S H+EP V QAL++P W
Sbjct: 768 STPSSPVSSTPTNTVSRTINNHSMQTRSKSGIYKPKMPPSLFLAHSEPKNVKQALSDPDW 827
Query: 161 KKAMEDEFAALIK 123
AM+ E++AL++
Sbjct: 828 FSAMKQEYSALLQ 840
Score = 47.8 bits (112), Expect(2) = 1e-54
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -2
Query: 124 KNNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
+N+TW LVP + V KW FR K DGS++K+KARLV
Sbjct: 840 QNHTWDLVPLPSNRQAVGCKWVFRVKENADGSINKFKARLV 880
>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 488
Score = 189 bits (480), Expect = 2e-53
Identities = 103/244 (42%), Positives = 135/244 (55%), Gaps = 13/244 (5%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
L +L ++LPL++W AF TA Y INRLPSS +G SP++ ++ PDY FLK+FGC+CF
Sbjct: 171 LAMLHHSALPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKIFGCSCF 230
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P LRPYN HK+Q RS +CVFLGYS SHKGY+CLS SG++++++ V FNE FPY LF
Sbjct: 231 PLLRPYNQHKIQPRSEECVFLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFVT 290
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCS----NPDIXXXXXXXXXXXXXXXXXXXXPQT---- 306
S +P I T
Sbjct: 291 TTQASIPATSVSILPSLVCSHNPSSSTLISPAITASSGSSESNFLPSSTPVNSSTTSPTA 350
Query: 305 ---SNSPSAP--HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDE 141
S+SP AP + H M+TRSKNGI +P++ + L + EP TV AL +PHW AM+ E
Sbjct: 351 SSSSHSPPAPPRNAHPMITRSKNGIIQPRINPTLLLSNVEPKTVKSALTDPHWLSAMQAE 410
Query: 140 FAAL 129
AL
Sbjct: 411 LTAL 414
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 186 bits (473), Expect(2) = 3e-53
Identities = 102/250 (40%), Positives = 138/250 (55%), Gaps = 18/250 (7%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTL+AQA LP+ +W +F TA Y INRLPSS + + P+ KL+ PDY L++FGC+CF
Sbjct: 671 LTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCF 730
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFP- 465
P LRPYN HKLQFRS +CVFLGYS SHKGY+CL++ G++++++ V FNE++FPY LF
Sbjct: 731 PHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSS 790
Query: 464 ----------XXXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXX 315
++P +
Sbjct: 791 SKASDSQLPISVPLTINPTPTPTHATRLTSPNPPTTSPSLISDSYSPNTAAHTSPSTLSI 850
Query: 314 PQTSN-SPSA-----PH-THTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKK 156
P +SN PS+ PH H M TR+K+GI KP+L + L EP T QAL+NP W
Sbjct: 851 PTSSNLEPSSSPIIHPHNVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSA 910
Query: 155 AMEDEFAALI 126
AM+ E+ AL+
Sbjct: 911 AMQTEYNALL 920
Score = 50.8 bits (120), Expect(2) = 3e-53
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = -2
Query: 142 SLLHL*KNNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
+LLH NNTW LVP + KW FR K P+GS+ KYKARLV
Sbjct: 918 ALLH---NNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLV 961
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 186 bits (473), Expect(2) = 3e-53
Identities = 102/250 (40%), Positives = 138/250 (55%), Gaps = 18/250 (7%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTL+AQA LP+ +W +F TA Y INRLPSS + + P+ KL+ PDY L++FGC+CF
Sbjct: 336 LTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCF 395
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFP- 465
P LRPYN HKLQFRS +CVFLGYS SHKGY+CL++ G++++++ V FNE++FPY LF
Sbjct: 396 PHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSS 455
Query: 464 ----------XXXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXX 315
++P +
Sbjct: 456 SKASDSQLPISVPLTINPTPTPTHATRLTSPNPPTTSPSLISDSYSPNTAAHTSPSTLSI 515
Query: 314 PQTSN-SPSA-----PH-THTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKK 156
P +SN PS+ PH H M TR+K+GI KP+L + L EP T QAL+NP W
Sbjct: 516 PTSSNLEPSSSPIIHPHNVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSA 575
Query: 155 AMEDEFAALI 126
AM+ E+ AL+
Sbjct: 576 AMQTEYNALL 585
Score = 50.8 bits (120), Expect(2) = 3e-53
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = -2
Query: 142 SLLHL*KNNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
+LLH NNTW LVP + KW FR K P+GS+ KYKARLV
Sbjct: 583 ALLH---NNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLV 626
>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 600
Score = 189 bits (479), Expect = 2e-52
Identities = 99/244 (40%), Positives = 130/244 (53%), Gaps = 13/244 (5%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
L +L ASLPL +W F TA Y INRLPSS +GH SP+ ++ PDY FLK+FGC+CF
Sbjct: 302 LAMLHHASLPLKFWDHGFLTATYLINRLPSSSIGHQSPYHLIHHKEPDYQFLKIFGCSCF 361
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P LRPYN HK+Q RS +C+FLGYS +HKGY+CLS SG++++++ V FNES FPY LF
Sbjct: 362 PLLRPYNQHKIQPRSEECLFLGYSPTHKGYKCLSKSGRIYISKDVVFNESRFPYQDLFVS 421
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXXPQTSNSPSAP- 285
++P+ ++SP+
Sbjct: 422 KSVSSTPATSVSNIPSLIHSPSQFNSPESSTHSDPDFLHSQPAPADSQLSSFNSSPNISA 481
Query: 284 ------------HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDE 141
+ H M TRSKNGI +P+L + L H P TV AL +PHW AM+ E
Sbjct: 482 ASGSISETARPLNLHPMTTRSKNGIVQPRLNPTLLLSHVVPKTVKTALADPHWLAAMQTE 541
Query: 140 FAAL 129
AL
Sbjct: 542 ITAL 545
>ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415746 [Ziziphus jujuba]
Length = 884
Score = 176 bits (445), Expect(2) = 5e-52
Identities = 97/245 (39%), Positives = 135/245 (55%), Gaps = 13/245 (5%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
L+LLAQA + L YWW+AFS+A Y INR P++VL + SPF+K+Y PDY FL VFGC C+
Sbjct: 402 LSLLAQAHMTLKYWWEAFSSAVYLINRTPTTVLDYKSPFQKVYNQVPDYGFLTVFGCACY 461
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P+LRPY++ KLQFR+SKCVF+GYS HKGY+ + SG+++VA++V+FNE +FP+ F
Sbjct: 462 PYLRPYHTQKLQFRTSKCVFVGYSTEHKGYKYMHPSGRLYVAKSVKFNEFDFPFAAGF-- 519
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXXPQTSNSPSAPH 282
S S PD S +
Sbjct: 520 ------------MSNTSSAKFTSSSPPD---QYSNTPLVKINATPLPSTGSQSQKTLYEN 564
Query: 281 THTMVTRSKNGIFKPKLY-------------NSSLSIHTEPTTVSQALNNPHWKKAMEDE 141
+ M TRSK GI KPK+Y +S S+ + +T+ +AL + WK AM+ E
Sbjct: 565 KNPMQTRSKIGIVKPKVYVSTKKALDAIISHTTSTSLILKSSTIKEALQSSEWKSAMDAE 624
Query: 140 FAALI 126
+ AL+
Sbjct: 625 YNALL 629
Score = 57.4 bits (137), Expect(2) = 5e-52
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = -2
Query: 142 SLLHL*KNNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
+LLH NNTW VPYS MN++ +KW FR K+ +GS+ YKARLV
Sbjct: 627 ALLH---NNTWTRVPYSSKMNVIGNKWVFRVKYNANGSIQLYKARLV 670
>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 872
Score = 189 bits (479), Expect = 3e-51
Identities = 104/244 (42%), Positives = 134/244 (54%), Gaps = 13/244 (5%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
L +L ++LPL +W AF TA Y INRLPSS +G SP++ ++ PDY FLKVFGC+CF
Sbjct: 302 LAMLHHSALPLKFWDHAFLTATYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKVFGCSCF 361
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P LRPYN HK+Q RS +C+FLGYS SHKGY+CLS SG++++++ V FNE FPY LF
Sbjct: 362 PLLRPYNQHKIQPRSEECLFLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFIT 421
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCS----NPDIXXXXXXXXXXXXXXXXXXXXPQT---- 306
S +P I T
Sbjct: 422 TTQASIPATSVSILPSLVCSHNPSSSTLISPAITASSGSSESNFLPSSTPVNISTTSPTA 481
Query: 305 ---SNSPSAP--HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDE 141
SNSP AP + H M+TRSKNGI +P++ + L + EP TV AL +PHW AM+ E
Sbjct: 482 SSSSNSPPAPPRNDHPMITRSKNGIIQPRINATLLLSNVEPKTVKSALTDPHWLAAMQAE 541
Query: 140 FAAL 129
AL
Sbjct: 542 ITAL 545
>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 297
Score = 177 bits (450), Expect = 5e-51
Identities = 102/238 (42%), Positives = 129/238 (54%), Gaps = 20/238 (8%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
+TLL ASLPL++W FSTA Y INRLP++ L PF L+ PDY FLK FGC CF
Sbjct: 61 ITLLYHASLPLTFWDYVFSTAVYLINRLPTASLNFDIPFTVLFKQTPDYNFLKTFGCVCF 120
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
FLRPY +HKL FRS +CVFLGYS SHKGY+CLS+SGK+++++ V FNE+ FPY+ LF
Sbjct: 121 SFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLF-- 178
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCSN------PDIXXXXXXXXXXXXXXXXXXXXPQTSN 300
CS+ P I SN
Sbjct: 179 QHTSTPVPSPSQYFTLNPDLSPPCSHTTASSLPFIPVSETSNHSGQDNILSVSPTVSQSN 238
Query: 299 S-PSAP-------------HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNP 168
S PS+P + H+M TRSK+GI+KPK+ S H+EP V QAL++P
Sbjct: 239 STPSSPVSSTPTNTVSRTINNHSMQTRSKSGIYKPKMPPSLFLAHSEPKNVKQALSDP 296
>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 183 bits (465), Expect = 7e-51
Identities = 101/249 (40%), Positives = 132/249 (53%), Gaps = 17/249 (6%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LT+LAQA LP+ +W AF T+ Y INRLPSS + H PF KL+ PDY FL++FGC+CF
Sbjct: 211 LTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPFRKLFHQLPDYNFLRIFGCSCF 270
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFP- 465
P LRPYN +KLQ RS +CVFLGYS SHKGY+CL+ +G++F+++ V F E+ FPY +LFP
Sbjct: 271 PHLRPYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVIFCETRFPYPSLFPA 330
Query: 464 --------------XXXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXX 327
+ SN +
Sbjct: 331 SATNPPTSSIPVPLVITSLQPPMPTDSPPLISPNTSPTTSNSTLSSSSATTSSVSASTLL 390
Query: 326 XXXXPQTSNSPSAPHT--HTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKA 153
S + P T H+M TR+K GI KP L + L HTEP + QAL N W A
Sbjct: 391 PTSSTSLSTHDTTPITNIHSMTTRAKAGIVKPCLQPTLLLTHTEPKSTKQALANDTWLAA 450
Query: 152 MEDEFAALI 126
M+ E+ AL+
Sbjct: 451 MKQEYNALL 459
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 188 bits (477), Expect = 1e-50
Identities = 102/244 (41%), Positives = 133/244 (54%), Gaps = 13/244 (5%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
L +L ++LPL++W AF TA Y INRLPSS +G SP++ ++ PDYTFLKVFGC+CF
Sbjct: 673 LAMLHHSTLPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHHKDPDYTFLKVFGCSCF 732
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P LRPYN HKLQ RS +CVFLGYS HKGY+CLS SG++++++ V FNE FPY LF
Sbjct: 733 PLLRPYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYISKDVIFNEGRFPYHDLFVT 792
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXXPQTSNSPSAP- 285
S+ + P S++ S P
Sbjct: 793 ATSDSIPATSVSTLPSLVCSHNPSSSTLVSPTVPTNSGSSESNFSLPSMPDNSSTNSPPA 852
Query: 284 ------------HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDE 141
+ H M+TRSKNGI +P+L + L + EP TV AL +PHW AM+ E
Sbjct: 853 SSSSPSLSAPPLNIHPMITRSKNGILQPRLNPTLLLSNVEPKTVKSALTDPHWLSAMQAE 912
Query: 140 FAAL 129
AL
Sbjct: 913 LTAL 916
>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 839
Score = 181 bits (459), Expect(2) = 4e-50
Identities = 104/241 (43%), Positives = 133/241 (55%), Gaps = 9/241 (3%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTLLAQA LP+ +W AF T+ Y INRLPSS + PF KL+ PDY FL+VFGC+CF
Sbjct: 322 LTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPFRKLFHHLPDYNFLRVFGCSCF 381
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLF-- 468
P LRPYN KLQFRS +CVFLGYS SHKGY+CL+ SG+VF+++ V F E+ FPY TLF
Sbjct: 382 PHLRPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRVFISKDVIFCENRFPYPTLFSP 441
Query: 467 --PXXXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXXPQTSNSP 294
P S ++P +++ P
Sbjct: 442 STPSPSSSSITVPLVVTNPQAPITSTSHTSPSSPIFTDSSPSQPSHTSPTPNPSASTSLP 501
Query: 293 S---AP--HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDEFAAL 129
+ AP + H M TR+K GI KP+L + L H EP QAL + W AM+ E+ AL
Sbjct: 502 THVEAPPINLHPMTTRAKAGIVKPRLQPTLLLTHFEPKNTKQALASDTWLAAMKQEYNAL 561
Query: 128 I 126
+
Sbjct: 562 M 562
Score = 45.4 bits (106), Expect(2) = 4e-50
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = -2
Query: 121 NNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
N TW LVP + KW FR K PDG++ K+KARLV
Sbjct: 564 NGTWTLVPLPSHRTAIGCKWVFRIKENPDGTVHKHKARLV 603
>gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 904
Score = 186 bits (471), Expect = 5e-50
Identities = 103/244 (42%), Positives = 134/244 (54%), Gaps = 13/244 (5%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
L +L ++LPL++W AF TA INRLPSS +G SP++ ++ PDY FLKVFGC+CF
Sbjct: 640 LAMLHHSALPLNFWDHAFLTATCLINRLPSSSVGFQSPYKLIHNKDPDYAFLKVFGCSCF 699
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P LRPYN HK+Q RS +CVFLGYS SHKGY+CLS SG++++++ V FNE FPY LF
Sbjct: 700 PLLRPYNQHKIQPRSEECVFLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFVT 759
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCS----NPDIXXXXXXXXXXXXXXXXXXXXPQT---- 306
S +P I T
Sbjct: 760 TTQASIPATSVSILPSLVCSHNPSSSTLISPAITASSGSSESNLLPSSTPVNSSTTSPTA 819
Query: 305 ---SNSPSAP--HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDE 141
S+SP AP + H M+TRSKNGI +P++ + L + EP TV AL +PHW AM+ E
Sbjct: 820 SSSSHSPPAPPRNAHPMITRSKNGIIQPRINLTLLLSNVEPKTVKSALTDPHWLSAMQAE 879
Query: 140 FAAL 129
AL
Sbjct: 880 LTAL 883
>gb|KYP50090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 889
Score = 177 bits (450), Expect(2) = 3e-49
Identities = 102/255 (40%), Positives = 130/255 (50%), Gaps = 24/255 (9%)
Frame = -1
Query: 818 TLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCFP 639
TLL ASLPL +W +F+TA Y INRLPS+ L PF L+ +PDY FL+ FGC CFP
Sbjct: 331 TLLHHASLPLQFWDFSFTTAVYLINRLPSAALNFDVPFTVLFNKSPDYKFLRTFGCACFP 390
Query: 638 FLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPXX 459
FLRPY SHKL FRS +CVFLGYS SHKGY+CLSSS ++++++ V FNE FPY LF
Sbjct: 391 FLRPYASHKLHFRSQECVFLGYSNSHKGYKCLSSSSRIYISKDVIFNEHRFPYTDLFQPS 450
Query: 458 XXXXXXXXXXXXXXXXXXXXXSCS-----NPDIXXXXXXXXXXXXXXXXXXXXPQTSNSP 294
+ S P + S+
Sbjct: 451 PTQNVSPCQYFTLNPDLSPPCNTSPVLSQQPPLFSQIGDPSVSINPTVSSSQNVSPSSHE 510
Query: 293 SAPH---THT----------------MVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNN 171
S+ H +HT M TRSK G P+L+ S H+EP V QAL +
Sbjct: 511 SSSHNVSSHTSSTDTESIPRTINNHPMQTRSKFGFHNPRLHPSLFLAHSEPKNVKQALAD 570
Query: 170 PHWKKAMEDEFAALI 126
P+W AM+ E+ AL+
Sbjct: 571 PNWFSAMQQEYNALM 585
Score = 46.2 bits (108), Expect(2) = 3e-49
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = -2
Query: 121 NNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
N+TW LV D V KW FR K DGS+DK KARLV
Sbjct: 587 NHTWDLVSLPSDRKAVGCKWVFRVKENVDGSIDKLKARLV 626
>gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 243
Score = 171 bits (433), Expect = 4e-49
Identities = 96/227 (42%), Positives = 125/227 (55%), Gaps = 14/227 (6%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
+TLL ASLPL++W AFSTA Y INRLP++ L PF L+ APDY FLK FGC CF
Sbjct: 14 ITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVLFKQAPDYKFLKTFGCACF 73
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFP- 465
PFLRPY +HKL FRS +CVFLGYS SHKGY+CLS+SGK+++++ V FNE+ FPY+ LF
Sbjct: 74 PFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLFQH 133
Query: 464 XXXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXXPQTSNSPSAP 285
+ + Q++++PS+P
Sbjct: 134 TSTLVPSPSQYFTLNPDLSPPCYHTTTSSLPFIPVSETSNHSGQDNILSVSQSTSTPSSP 193
Query: 284 -------------HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQ 183
+ H+M TRSK GIFK K+ L+ H+EP V Q
Sbjct: 194 VSSAPTNTVSRTINNHSMQTRSKYGIFKSKMPPLFLA-HSEPKNVKQ 239
>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 682
Score = 177 bits (450), Expect(2) = 4e-48
Identities = 101/241 (41%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTLLAQA L +S+W AF T+ Y INRLPSS + PF+KL+ PDY FL+VFGC+CF
Sbjct: 308 LTLLAQAQLSMSFWDYAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCF 367
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P L PYN KLQFRS +CVFLGYS SHKGY+CL+ SG++F+++ V F E+ FPY ++FP
Sbjct: 368 PHLWPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPP 427
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCS-NPDIXXXXXXXXXXXXXXXXXXXXPQTSNSPSAP 285
S +P P S+S S P
Sbjct: 428 STPSSSSSPIFVPLVITNPQAPVTSTSPSPPSPPISTDSSSSRPSHTSPRPSPSSSNSLP 487
Query: 284 --------HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDEFAAL 129
+ H M TR+K GI KP+L + L H EP + QAL + W AM+ ++ AL
Sbjct: 488 TRVEAPPVNLHPMTTRAKAGIAKPRLQPTLLLTHFEPKSTKQALASDTWLAAMKQKYDAL 547
Query: 128 I 126
+
Sbjct: 548 M 548
Score = 42.4 bits (98), Expect(2) = 4e-48
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -2
Query: 121 NNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
N TW LV + KW FR K PDG++ K+KARLV
Sbjct: 550 NGTWTLVSLPSHRTTIGCKWVFRIKENPDGTVHKHKARLV 589
>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 661
Score = 177 bits (450), Expect(2) = 4e-48
Identities = 101/241 (41%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTLLAQA L +S+W AF T+ Y INRLPSS + PF+KL+ PDY FL+VFGC+CF
Sbjct: 287 LTLLAQAQLSMSFWDYAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCF 346
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P L PYN KLQFRS +CVFLGYS SHKGY+CL+ SG++F+++ V F E+ FPY ++FP
Sbjct: 347 PHLWPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPP 406
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCS-NPDIXXXXXXXXXXXXXXXXXXXXPQTSNSPSAP 285
S +P P S+S S P
Sbjct: 407 STPSSSSSPIFVPLVITNPQAPVTSTSPSPPSPPISTDSSSSRPSHTSPRPSPSSSNSLP 466
Query: 284 --------HTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDEFAAL 129
+ H M TR+K GI KP+L + L H EP + QAL + W AM+ ++ AL
Sbjct: 467 TRVEAPPVNLHPMTTRAKAGIAKPRLQPTLLLTHFEPKSTKQALASDTWLAAMKQKYDAL 526
Query: 128 I 126
+
Sbjct: 527 M 527
Score = 42.4 bits (98), Expect(2) = 4e-48
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -2
Query: 121 NNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
N TW LV + KW FR K PDG++ K+KARLV
Sbjct: 529 NGTWTLVSLPSHRTTIGCKWVFRIKENPDGTVHKHKARLV 568
>gb|KYP43795.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 974
Score = 177 bits (450), Expect = 4e-47
Identities = 98/244 (40%), Positives = 130/244 (53%), Gaps = 13/244 (5%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
L +L +LPL +W AF TA Y INRLP+S +G SP++ ++ PDYTFLKVFGC+CF
Sbjct: 672 LAVLHHLALPLKFWDHAFLTATYLINRLPTSSVGFQSPYKLIHNKDPDYTFLKVFGCSCF 731
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
P LRPYN HK+Q RS +C+FLGYS +HKGY+CLS SG++++++ V FNE FPY LF
Sbjct: 732 PLLRPYNQHKIQPRSEECLFLGYSPNHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFIT 791
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCS----NPDIXXXXXXXXXXXXXXXXXXXXPQTSNSP 294
S P I TS +
Sbjct: 792 KPQASIPATSVSTLTSLVCSHNLSSFTIIPPAISASSGSSESNFLPSSTPANISTTSTTA 851
Query: 293 SA---------PHTHTMVTRSKNGIFKPKLYNSSLSIHTEPTTVSQALNNPHWKKAMEDE 141
S+ P+ H M T SKNGI +P++ + L + EP TV AL +P+W AM+ E
Sbjct: 852 SSSSNSPPVIPPNVHPMTTCSKNGIIQPRINPTLLLSNVEPKTVKTALTDPNWLAAMQAE 911
Query: 140 FAAL 129
AL
Sbjct: 912 ITAL 915
>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1358
Score = 168 bits (426), Expect(2) = 1e-46
Identities = 98/258 (37%), Positives = 128/258 (49%), Gaps = 26/258 (10%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTLL ASLPL +W AF+TA Y INRLPS+ L PF L+ +PDY FL+ FGC CF
Sbjct: 613 LTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACF 672
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
PFLRPY SHKL FRS +CVFLGYS SHKGY+CLSSSG++++++ V FNE FPY LF
Sbjct: 673 PFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLF-- 730
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXXPQTSN---SPS 291
C+ + +S+ SPS
Sbjct: 731 QPSLTQNVSPCQYFNLNPDLSPPCTTSTVLSQQPPLPSQIGDSSVSIIPSVSSSQNVSPS 790
Query: 290 APHTHTMVTRSKNGIFKPKLYNSSLSIH-----------------------TEPTTVSQA 180
+P + + S P +++ H +EP TV QA
Sbjct: 791 SPESSSQNVSSPTSSTAPASIPRTINNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVKQA 850
Query: 179 LNNPHWKKAMEDEFAALI 126
L +P+W AM+ E+ AL+
Sbjct: 851 LADPNWFSAMQQEYNALM 868
Score = 46.6 bits (109), Expect(2) = 1e-46
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = -2
Query: 121 NNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
N+TW LV D V KW FR K DGS+DK KARLV
Sbjct: 870 NHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLV 909
>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1279
Score = 168 bits (426), Expect(2) = 1e-46
Identities = 98/258 (37%), Positives = 128/258 (49%), Gaps = 26/258 (10%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTLL ASLPL +W AF+TA Y INRLPS+ L PF L+ +PDY FL+ FGC CF
Sbjct: 534 LTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACF 593
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPYVTLFPX 462
PFLRPY SHKL FRS +CVFLGYS SHKGY+CLSSSG++++++ V FNE FPY LF
Sbjct: 594 PFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDLF-- 651
Query: 461 XXXXXXXXXXXXXXXXXXXXXXSCSNPDIXXXXXXXXXXXXXXXXXXXXPQTSN---SPS 291
C+ + +S+ SPS
Sbjct: 652 QPSLTQNVSPCQYFNLNPDLSPPCTTSTVLSQQPPLPSQIGDSSVSIIPSVSSSQNVSPS 711
Query: 290 APHTHTMVTRSKNGIFKPKLYNSSLSIH-----------------------TEPTTVSQA 180
+P + + S P +++ H +EP TV QA
Sbjct: 712 SPESSSQNVSSPTSSTAPASIPRTINNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVKQA 771
Query: 179 LNNPHWKKAMEDEFAALI 126
L +P+W AM+ E+ AL+
Sbjct: 772 LADPNWFSAMQQEYNALM 789
Score = 46.6 bits (109), Expect(2) = 1e-46
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = -2
Query: 121 NNTWQLVPYSDDMNLVQHKWAFRTKFKPDGSLDKYKARLV 2
N+TW LV D V KW FR K DGS+DK KARLV
Sbjct: 791 NHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLV 830
>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
Length = 877
Score = 169 bits (429), Expect = 2e-44
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = -1
Query: 821 LTLLAQASLPLSYWWDAFSTAAYTINRLPSSVLGHISPFEKLYGFAPDYTFLKVFGCTCF 642
LTLLAQA LPL +WW+AF TA Y INRLP+ +L + SPFEKL+ PDYT +KVFGC+C+
Sbjct: 630 LTLLAQAHLPLKFWWNAFHTATYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCY 689
Query: 641 PFLRPYNSHKLQFRSSKCVFLGYSASHKGYRCLSSSGKVFVARTVQFNESEFPY 480
P+LRPYN HKLQFRS +CVFLGYS+ HKGY+CL SG+V+++ V F+ES FP+
Sbjct: 690 PYLRPYNHHKLQFRSERCVFLGYSSLHKGYQCLHLSGRVYISNHVTFDESFFPF 743