BLASTX nr result
ID: Rehmannia28_contig00053421
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00053421
(448 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera] 75 5e-21
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 74 3e-19
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 56 3e-13
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 56 1e-12
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera] 65 2e-12
emb|CDY58610.1| BnaCnng33390D [Brassica napus] 51 7e-12
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 50 2e-11
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 50 2e-11
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 50 2e-11
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 50 2e-11
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 50 2e-11
>emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]
Length = 731
Score = 75.5 bits (184), Expect(3) = 5e-21
Identities = 36/67 (53%), Positives = 45/67 (67%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HPAF ILK+ +S+N L SS F NAC CN SHKLSF T+ S+ PL+I++S+VW
Sbjct: 295 HPAFPILKHVISTNNLALSSSSLLHFSCNACHCNKSHKLSFSNSTINSSHPLQILYSDVW 354
Query: 361 ASPINLY 381
SPI Y
Sbjct: 355 TSPIISY 361
Score = 37.4 bits (85), Expect(3) = 5e-21
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+T+YIWFYP+ Q S VK+
Sbjct: 369 IFVDHFTKYIWFYPLKQKSQVKD 391
Score = 35.0 bits (79), Expect(3) = 5e-21
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 114 KSKDDVYGWPVPSSLLAFPAISTS 185
K+KD VY WPV S LLAF ++ TS
Sbjct: 262 KTKDGVYEWPVSSPLLAFSSVKTS 285
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 74.3 bits (181), Expect(3) = 3e-19
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HPAF ILK+ +S+N L SS F N C CN SHKLSF T+ S++PL+I++S+VW
Sbjct: 371 HPAFPILKHVISTNNLALSSSSLLHFSCNTCHCNKSHKLSFSNSTINSSRPLQILYSDVW 430
Query: 361 ASPINLY 381
SPI Y
Sbjct: 431 TSPIISY 437
Score = 33.9 bits (76), Expect(3) = 3e-19
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +++T+YIWFYP+ Q S VK+
Sbjct: 445 IFVDYFTKYIWFYPLKQISQVKD 467
Score = 33.5 bits (75), Expect(3) = 3e-19
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 69 SFLVKDAEK-QHF*QYKSKDDVYGWPVPSSLLAFPAISTS 185
SFLVKD + K+KD VY W V S LLAF ++ TS
Sbjct: 322 SFLVKDLRTGATLLKGKTKDGVYEWLVSSPLLAFSSVKTS 361
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 56.2 bits (134), Expect(3) = 3e-13
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +LK VS + +S FP + CL N SHKL F T++S PLE ++S+VW
Sbjct: 566 HPSPPVLKSLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTIISYTPLEYVYSDVW 625
Query: 361 ASPI 372
SP+
Sbjct: 626 TSPV 629
Score = 33.1 bits (74), Expect(3) = 3e-13
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEK-QHF*QYKSKDDVYGWPVPS----SLLAFPAISTS 185
++CN KVS F VKD Q ++KD++Y WPVPS SL A P T+
Sbjct: 498 KLCNANKVSVEFFPAHFQVKDLSTGARLLQGRTKDELYEWPVPSNTPISLFASPTPKTT 556
Score = 32.0 bits (71), Expect(3) = 3e-13
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VK 445
I +HYTRY W YP+ Q S V+
Sbjct: 640 ILVDHYTRYTWLYPLKQKSQVR 661
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 56.2 bits (134), Expect(3) = 1e-12
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ S LK VS + +S+ F + CL N +HKL F T+ STQPLE ++ ++W
Sbjct: 430 HPSLSTLKVVVSQFSLPVSNSLQKQFNCSDCLLNKTHKLPFHTNTITSTQPLEYLYIDLW 489
Query: 361 ASPI 372
SPI
Sbjct: 490 TSPI 493
Score = 35.8 bits (81), Expect(3) = 1e-12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 389 NHYTRYIWFYPINQNS*VKN 448
+HYTRY WFYPI Q S VK+
Sbjct: 507 DHYTRYSWFYPIKQKSHVKD 526
Score = 26.9 bits (58), Expect(3) = 1e-12
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPV 146
++CN KVS F VKD + Q ++KD++Y WPV
Sbjct: 362 RMCNANKVSVEFFPAHFQVKDLKTGVQLLQGRTKDELYEWPV 403
>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
Length = 786
Score = 65.1 bits (157), Expect(2) = 2e-12
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP F ILK+ VS + L SS+ + F N C N +HKL F T+VS+QPLEIIFS+VW
Sbjct: 168 HPVFPILKHIVSHYQLDLSSSLISDFLCNVCHYNKNHKLPFSTSTVVSSQPLEIIFSDVW 227
Query: 361 AS 366
S
Sbjct: 228 TS 229
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+T+YIWFY Q S VK+
Sbjct: 242 IFVDHFTKYIWFYSFQQKSEVKD 264
>emb|CDY58610.1| BnaCnng33390D [Brassica napus]
Length = 856
Score = 50.8 bits (120), Expect(3) = 7e-12
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ ++L+ VS L ++ P + CL N SHKL F T+ S +PLE ++S+VW
Sbjct: 254 HPSNTVLQTLVSHFSLPLSTTSHKQSPCSHCLINKSHKLPFYSNTIHSQKPLEYVYSDVW 313
Query: 361 ASPI 372
SP+
Sbjct: 314 TSPL 317
Score = 34.3 bits (77), Expect(3) = 7e-12
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
+F +HYTRY W YP+ Q S V++
Sbjct: 328 VFVDHYTRYTWLYPLKQKSQVRD 350
Score = 31.2 bits (69), Expect(3) = 7e-12
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 12/59 (20%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEK-QHF*QYKSKDDVYGWPVPS----SLLAFPAISTS 185
++CNT KVS F VKD Q ++KD++Y WPV + SL A P+ T+
Sbjct: 186 RLCNTNKVSVEFFPAHFQVKDLSTGARLLQGRTKDELYEWPVQTTRSISLFASPSPKTT 244
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSFISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSFISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 452 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 511
Query: 361 ASPI 372
+SPI
Sbjct: 512 SSPI 515
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 526 IFVDHFTRYTWLYPLKQKSQVKD 548
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 384 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 428
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 471 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530
Query: 361 ASPI 372
+SPI
Sbjct: 531 SSPI 534
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 545 IFVDHFTRYTWLYPLKQKSQVKD 567
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 403 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 447
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 181 HPAFSILKYNVSSNKFGLDSSVSATFP*NACLCNNSHKLSFPRPTLVSTQPLEIIFSNVW 360
HP+ +IL +S++ + + + C N SHK+ F T+ S++PLE I+S+VW
Sbjct: 326 HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 385
Query: 361 ASPI 372
+SPI
Sbjct: 386 SSPI 389
Score = 34.3 bits (77), Expect(3) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 IFDNHYTRYIWFYPINQNS*VKN 448
IF +H+TRY W YP+ Q S VK+
Sbjct: 400 IFVDHFTRYTWLYPLKQKSQVKD 422
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +3
Query: 45 QVCNTKKVS-------FLVKDAEKQ-HF*QYKSKDDVYGWPVPSS 155
++CNT +VS F VKD Q K+KD++Y WP+ SS
Sbjct: 258 RLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASS 302