BLASTX nr result
ID: Rehmannia28_contig00053337
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00053337
(384 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011084734.1| PREDICTED: pentatricopeptide repeat-containi... 87 1e-17
ref|XP_012858546.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-17
emb|CDP05128.1| unnamed protein product [Coffea canephora] 65 5e-10
ref|XP_008347239.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-08
gb|KCW90608.1| hypothetical protein EUGRSUZ_A02716, partial [Euc... 59 1e-07
ref|XP_010060236.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-07
ref|XP_009368719.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-07
ref|XP_012440089.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-07
ref|XP_007038851.1| Pentatricopeptide repeat-containing protein,... 58 3e-07
ref|XP_015878312.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-07
ref|XP_002513633.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-07
ref|XP_003592182.1| pentatricopeptide (PPR) repeat protein [Medi... 56 1e-06
ref|XP_006589520.1| PREDICTED: pentatricopeptide repeat-containi... 55 2e-06
ref|XP_012090723.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-06
ref|XP_008234821.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-06
>ref|XP_011084734.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Sesamum indicum]
Length = 745
Score = 87.0 bits (214), Expect = 1e-17
Identities = 41/70 (58%), Positives = 45/70 (64%)
Frame = -1
Query: 210 MLRSNVLEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEH 31
MLR N+LEETCSKI+ FCNK LKDGIC+HSPI LYAKCCGVEH
Sbjct: 1 MLRRNLLEETCSKIVQFCNKYSLKDGICVHSPIFKLGVHDNLLLSNNLLSLYAKCCGVEH 60
Query: 30 AHHLFDSATF 1
A HLFD +
Sbjct: 61 ARHLFDEMLY 70
>ref|XP_012858546.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Erythranthe guttata]
Length = 759
Score = 86.7 bits (213), Expect = 2e-17
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = -1
Query: 210 MLRSNVLEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEH 31
MLR N+LE+TCSKIIYFCNKQF+KDG+CIHSP+ LYAKC GV+H
Sbjct: 1 MLRINLLEKTCSKIIYFCNKQFMKDGVCIHSPLLKLGIQDNLLLTNNLLSLYAKCFGVQH 60
Query: 30 AHHLFD 13
A HLFD
Sbjct: 61 ARHLFD 66
>emb|CDP05128.1| unnamed protein product [Coffea canephora]
Length = 784
Score = 65.5 bits (158), Expect = 5e-10
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = -1
Query: 189 EETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFDS 10
EETCSKI+ +CNKQ LK+GIC+HSP LY+KC GV+HA H F+
Sbjct: 19 EETCSKIVSYCNKQLLKEGICVHSPSIKAGFQDNLWISNNLLALYSKCHGVDHARHFFEE 78
Query: 9 ATF 1
+
Sbjct: 79 MPY 81
>ref|XP_008347239.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Malus domestica]
Length = 902
Score = 59.3 bits (142), Expect = 7e-08
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = -1
Query: 198 NVLEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHL 19
N +ETC +++ CN Q L +GIC+HSPI LYAKC GVE A HL
Sbjct: 17 NCFKETCLRVLSACNSQSLPEGICVHSPITKLGLDDDLYLTNNLLSLYAKCSGVESARHL 76
Query: 18 FD 13
FD
Sbjct: 77 FD 78
>gb|KCW90608.1| hypothetical protein EUGRSUZ_A02716, partial [Eucalyptus grandis]
Length = 772
Score = 58.5 bits (140), Expect = 1e-07
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = -1
Query: 201 SNVLEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHH 22
S+ + CS+I+ FCN + L+DGIC+HSP+ LY+KCCG+E A
Sbjct: 15 SSRFRDICSRILVFCNSRSLRDGICVHSPVIKLGFEDDLYLNNNLLCLYSKCCGLEQARQ 74
Query: 21 LFD 13
FD
Sbjct: 75 FFD 77
>ref|XP_010060236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Eucalyptus grandis]
Length = 778
Score = 58.5 bits (140), Expect = 1e-07
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = -1
Query: 201 SNVLEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHH 22
S+ + CS+I+ FCN + L+DGIC+HSP+ LY+KCCG+E A
Sbjct: 15 SSRFRDICSRILVFCNSRSLRDGICVHSPVIKLGFEDDLYLNNNLLCLYSKCCGLEQARQ 74
Query: 21 LFD 13
FD
Sbjct: 75 FFD 77
>ref|XP_009368719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Pyrus x bretschneideri]
Length = 902
Score = 58.2 bits (139), Expect = 2e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = -1
Query: 198 NVLEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHL 19
N +ETC +++ CN Q L GIC+HSPI LYAKC GVE A HL
Sbjct: 17 NCFKETCLRVLSACNSQSLPQGICVHSPITKLGLDDDLYLTNNLLSLYAKCSGVEAARHL 76
Query: 18 FD 13
FD
Sbjct: 77 FD 78
>ref|XP_012440089.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Gossypium raimondii]
gi|763785635|gb|KJB52706.1| hypothetical protein
B456_008G273500 [Gossypium raimondii]
Length = 881
Score = 57.8 bits (138), Expect = 3e-07
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = -1
Query: 192 LEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFD 13
LEETCS+I+ FCN LK GI +HSP+ LYAKC GV A H FD
Sbjct: 18 LEETCSRILSFCNSNSLKQGISVHSPVIKLGLHHHLYLNNNLLSLYAKCFGVNKARHFFD 77
>ref|XP_007038851.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508776096|gb|EOY23352.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 884
Score = 57.8 bits (138), Expect = 3e-07
Identities = 27/64 (42%), Positives = 33/64 (51%)
Frame = -1
Query: 192 LEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFD 13
LEETCS+++ FCN LK+GI +H PI LY KC GV+ A H FD
Sbjct: 18 LEETCSRVLSFCNSNSLKEGISVHCPIVKLGLQDHLYLNNNLLSLYGKCLGVDKARHFFD 77
Query: 12 SATF 1
F
Sbjct: 78 EMPF 81
>ref|XP_015878312.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Ziziphus jujuba]
Length = 877
Score = 57.4 bits (137), Expect = 3e-07
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = -1
Query: 189 EETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFDS 10
E++C KI+Y CN Q LK+G+CIHSPI LYAKC G A + FD
Sbjct: 14 EDSCLKILYLCNSQSLKEGVCIHSPIIKLGLQDNLFLNNNLLSLYAKCFGARQARYFFDE 73
Query: 9 ATF 1
+
Sbjct: 74 MPY 76
>ref|XP_002513633.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Ricinus communis]
gi|223547541|gb|EEF49036.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 777
Score = 57.0 bits (136), Expect = 5e-07
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = -1
Query: 192 LEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFD 13
LE+ CSK++ CN + LK+G+CIHSPI LY+KC VEHA FD
Sbjct: 19 LEDVCSKVVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFD 78
>ref|XP_003592182.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| pentatricopeptide (PPR)
repeat protein [Medicago truncatula]
Length = 912
Score = 55.8 bits (133), Expect = 1e-06
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = -1
Query: 189 EETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFD 13
+ETC +++ FCN LK+GICIHSPI LYAK GV A HLFD
Sbjct: 15 QETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFD 73
>ref|XP_006589520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
gi|947086508|gb|KRH35229.1| hypothetical protein
GLYMA_10G230100 [Glycine max]
Length = 881
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = -1
Query: 186 ETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFD 13
ETC +++ CN Q LK+G C+HSPI LYAKC GV A HLFD
Sbjct: 18 ETCLQVLSLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFD 75
>ref|XP_012090723.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Jatropha curcas]
gi|643706076|gb|KDP22208.1| hypothetical protein
JCGZ_26039 [Jatropha curcas]
Length = 762
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = -1
Query: 189 EETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHLFD 13
E+ CS+I+ FCN + K G+CIHSPI LY KC GV+HA FD
Sbjct: 20 EDVCSQIVSFCNSKSSKQGVCIHSPIIKLGIQDNLYLNNNLLSLYWKCLGVQHARQFFD 78
>ref|XP_008234821.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Prunus mume]
Length = 898
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = -1
Query: 198 NVLEETCSKIIYFCNKQFLKDGICIHSPIXXXXXXXXXXXXXXXXXLYAKCCGVEHAHHL 19
N +ETC +++ CN + LK+G+ +HSPI LYAKC GVE A H
Sbjct: 17 NCFKETCLRVLSLCNSRALKEGVSVHSPITKLGLQEDLYLSNNLLSLYAKCFGVEPARHF 76
Query: 18 FD 13
FD
Sbjct: 77 FD 78