BLASTX nr result

ID: Rehmannia28_contig00053218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00053218
         (393 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMS95688.1| hypothetical protein BVRB_005910 [Beta vulgaris s...    52   2e-07
ref|XP_010666994.1| PREDICTED: uncharacterized protein LOC104884...    52   2e-07
gb|KNA08022.1| hypothetical protein SOVF_166370, partial [Spinac...    56   9e-07
gb|KMS64857.1| hypothetical protein BVRB_041960 [Beta vulgaris s...    52   1e-06
gb|KNA22848.1| hypothetical protein SOVF_030300, partial [Spinac...    45   1e-06

>gb|KMS95688.1| hypothetical protein BVRB_005910 [Beta vulgaris subsp. vulgaris]
          Length = 555

 Score = 52.4 bits (124), Expect(2) = 2e-07
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = -3

Query: 325 IFAMRHMETYMGGGARGWDCGLKKGGGNLISNLRIKYCYSIISQESNEQREKSLMEARKF 146
           ++AMRHMETY       WDCGL       +  LRI+YC  +++  +N++R +  + ARKF
Sbjct: 491 VYAMRHMETYHA--QNNWDCGLYSDNFEGLKKLRIQYCIDLLTDNANDKRVELQVLARKF 548



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 393 VKNAKLSRLSMPWRDSENKVDCG 325
           V   K+  + MPWR + N VDCG
Sbjct: 468 VAKFKIRLIEMPWRSNMNTVDCG 490


>ref|XP_010666994.1| PREDICTED: uncharacterized protein LOC104884099 [Beta vulgaris
           subsp. vulgaris]
          Length = 381

 Score = 52.4 bits (124), Expect(2) = 2e-07
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = -3

Query: 325 IFAMRHMETYMGGGARGWDCGLKKGGGNLISNLRIKYCYSIISQESNEQREKSLMEARKF 146
           ++AMRHMETY       WDCGL       +  LRI+YC  +++  +N++R +  + ARKF
Sbjct: 317 VYAMRHMETYHA--QNNWDCGLYSDNFEGLKKLRIQYCIDLLTDNANDKRVELQVLARKF 374



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 393 VKNAKLSRLSMPWRDSENKVDCG 325
           V   K+  + MPWR + N VDCG
Sbjct: 294 VAKFKIRLIEMPWRSNMNTVDCG 316


>gb|KNA08022.1| hypothetical protein SOVF_166370, partial [Spinacia oleracea]
          Length = 285

 Score = 55.8 bits (133), Expect = 9e-07
 Identities = 29/58 (50%), Positives = 37/58 (63%)
 Frame = -3

Query: 325 IFAMRHMETYMGGGARGWDCGLKKGGGNLISNLRIKYCYSIISQESNEQREKSLMEAR 152
           + AMRHMETYMG  A  WD  LKK  G+++ NLR KYC  I+  E N  +E  L +A+
Sbjct: 228 VLAMRHMETYMGQ-ATSWDPLLKKIDGHVLRNLRAKYCCEILKNEYNVVKEDVLKKAK 284


>gb|KMS64857.1| hypothetical protein BVRB_041960 [Beta vulgaris subsp. vulgaris]
          Length = 72

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = -3

Query: 325 IFAMRHMETYMGGGARGWDCGLKKGGGNLISNLRIKYCYSIISQESNEQREKSLMEARKF 146
           ++AMRHMETY       WDCGL       +  LRI+YC  +++  +N++R +  + ARKF
Sbjct: 8   VYAMRHMETYHA--QNNWDCGLYSDNFEGLKKLRIQYCIDLLTDNANDKRVELQVLARKF 65


>gb|KNA22848.1| hypothetical protein SOVF_030300, partial [Spinacia oleracea]
          Length = 258

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 325 IFAMRHMETYMGGGARGWDCGLK--KGGGNLISNLRIKYCYSIISQESNEQRE 173
           ++AMRHMETY G     WDCG    +   N I  LRI Y   I+S   NE+ E
Sbjct: 195 VYAMRHMETYKGN--PNWDCGFTNYEDDKNYIRQLRIHYATQILSSAQNEKHE 245



 Score = 33.5 bits (75), Expect(2) = 1e-06
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -1

Query: 393 VKNAKLSRLSMPWRDSENKVDCG 325
           +K  +++  SMPW++ ENKVDCG
Sbjct: 172 IKQYEITLPSMPWKNRENKVDCG 194


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