BLASTX nr result
ID: Rehmannia28_contig00053168
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00053168
(458 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010267875.1| PREDICTED: uncharacterized protein LOC104604... 64 1e-11
ref|XP_010272571.1| PREDICTED: uncharacterized protein LOC104608... 50 5e-10
ref|XP_010251928.1| PREDICTED: uncharacterized protein LOC104593... 55 2e-08
ref|XP_006594179.1| PREDICTED: uncharacterized protein LOC102659... 60 8e-08
ref|XP_010260173.1| PREDICTED: uncharacterized protein LOC104599... 60 8e-08
ref|XP_013664987.1| PREDICTED: uncharacterized protein LOC106369... 57 1e-06
ref|XP_010690620.1| PREDICTED: uncharacterized protein LOC104904... 56 2e-06
ref|XP_011069452.1| PREDICTED: uncharacterized protein LOC105155... 48 2e-06
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi... 56 2e-06
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 56 2e-06
>ref|XP_010267875.1| PREDICTED: uncharacterized protein LOC104604981 [Nelumbo nucifera]
Length = 774
Score = 63.5 bits (153), Expect(2) = 1e-11
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 98 KKTYL-LDLSIMIQTKISKYLSGHNSTNSGDIHTFSHVADYSSIKHKT--HFTLSLLSTL 268
K TY L L+ MIQ ++SK + G ++ ++ F+H+ D HF L L
Sbjct: 53 KATYQNLSLAEMIQLELSKMMKGKARIDNNLVN-FAHIGDLEGNNPTCAFHFALHSFDNL 111
Query: 269 DKDCWIVDTRASKHICTFPNLVANSDLLVSPVTIHLPDGTRIVVTHSGNVKFFNEITLTD 448
D WIVDT AS H+C L+ + + LP+G +V H G+V ++TLTD
Sbjct: 112 DCGTWIVDTGASNHMCIDNKLIRKPKPVTQITQVFLPNGFVKLVHHIGDVSLTPKLTLTD 171
Query: 449 AL 454
AL
Sbjct: 172 AL 173
Score = 32.3 bits (72), Expect(2) = 1e-11
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 1 GYPDWYKELKDQRARQS 51
GYP+WYKELK+QR + +
Sbjct: 14 GYPEWYKELKEQRNKMT 30
>ref|XP_010272571.1| PREDICTED: uncharacterized protein LOC104608321 [Nelumbo nucifera]
Length = 465
Score = 50.4 bits (119), Expect(2) = 5e-10
Identities = 30/90 (33%), Positives = 41/90 (45%)
Frame = +2
Query: 119 LSIMIQTKISKYLSGHNSTNSGDIHTFSHVADYSSIKHKTHFTLSLLSTLDKDCWIVDTR 298
LS IQ +++K L G NS + + DY+ I F L+ L WIVDT
Sbjct: 134 LSSFIQQELAKLLKGKMIVNSNHA-SLAXYEDYAGINFALTFALNTLDLYGHGVWIVDTG 192
Query: 299 ASKHICTFPNLVANSDLLVSPVTIHLPDGT 388
AS H+C L + ++LPDGT
Sbjct: 193 ASNHMCNGITLFTEPKTPLHKTPVYLPDGT 222
Score = 40.0 bits (92), Expect(2) = 5e-10
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 1 GYPDWYKELKDQRARQSINMVEGSEAT 81
GYPDWYK LKDQRA + N +E+T
Sbjct: 93 GYPDWYKTLKDQRAAKRANAANSTEST 119
>ref|XP_010251928.1| PREDICTED: uncharacterized protein LOC104593656 [Nelumbo nucifera]
Length = 537
Score = 54.7 bits (130), Expect(2) = 2e-08
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +2
Query: 119 LSIMIQTKISKYLSGHNSTNSGDIHTFSHVADYSS--IKHKTHFTLSLLSTLDKDCWIVD 292
L+ +IQ ++ K + G + ++ F+H+ D++ + + +F L+ + WIVD
Sbjct: 356 LANLIQQELIKLMKGKIPAAANMVN-FAHLEDFAGTVLNLELNFALNTVDLFRSGTWIVD 414
Query: 293 TRASKHICTFPNLVANSDLLVSPVTIHLPDGTRIVVTHSGNVKFFNEITLTDAL 454
T S H+CT +L+ ++ ++L DGT +V H+G V+ I LT+ L
Sbjct: 415 TGVSNHMCTDISLIHKPTVVSHMTLLYLSDGTVNLVKHTGTVQLTPRICLTNVL 468
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 GYPDWYKELKDQRARQS--INMVEGSEAT 81
GY DWYK+L+DQ+ ++S N + G AT
Sbjct: 303 GYLDWYKQLRDQKRKKSGTRNEIGGKYAT 331
>ref|XP_006594179.1| PREDICTED: uncharacterized protein LOC102659499 [Glycine max]
gi|571498310|ref|XP_006594180.1| PREDICTED:
uncharacterized protein LOC102659499 [Glycine max]
Length = 307
Score = 59.7 bits (143), Expect = 8e-08
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Frame = +2
Query: 86 VEDPKKTYLLDLSIMIQT-KISKYLSGHNSTNSGDIHTFSHVADYSSIKHKTH------F 244
+ D ++T ++ +M Q ++ L H S N G SH+ ++ K H F
Sbjct: 81 LNDSQETQNQNIRVMPQQYQVLMSLLQHQSNNGGFTSGTSHINQVGTVT-KPHIGKVLSF 139
Query: 245 TLSLLSTLDKDCWIVDTRASKHI-CTFPNLVANSDLLVSPVTIHLPDGTRIVVTHSGNVK 421
T S+ +D WI+D+ A+ H+ C+ + +SP+T+ LP G +++VTHSG VK
Sbjct: 140 TCSISKAEPRD-WILDSGATNHVACSLKFFYTHKQ--ISPITVQLPTGQQVIVTHSGIVK 196
Query: 422 FFNEITLTDAL 454
FF+ + L + L
Sbjct: 197 FFDSLYLENVL 207
>ref|XP_010260173.1| PREDICTED: uncharacterized protein LOC104599359 [Nelumbo nucifera]
Length = 783
Score = 60.1 bits (144), Expect = 8e-08
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +2
Query: 197 FSHVADYSSIKHKTHFTL--SLLSTLDKDCWIVDTRASKHICTFPNLVANSDLLVSPVTI 370
+S++ Y+ +K + F S L+ LD WIVDT AS H+CT L++ + + I
Sbjct: 346 WSYLDTYAGMKVQYAFNSKDSTLAVLDVGTWIVDTGASNHMCTDLKLLSQPKPITQIIPI 405
Query: 371 HLPDGTRIVVTHSGNVKFFNEITLTDAL 454
HLPDGT V H G+VK ++ LT+ L
Sbjct: 406 HLPDGTIKFVQHIGHVKLSPDLILTNTL 433
>ref|XP_013664987.1| PREDICTED: uncharacterized protein LOC106369368 [Brassica napus]
Length = 1808
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/81 (34%), Positives = 51/81 (62%)
Frame = +2
Query: 212 DYSSIKHKTHFTLSLLSTLDKDCWIVDTRASKHICTFPNLVANSDLLVSPVTIHLPDGTR 391
++ ++ +K H +L S L D WI+D+ AS H+C+ + +S + V+ VT+ LP+G++
Sbjct: 173 EHQTLCYKHHCLSTLPSLLPFDAWIIDSGASSHVCSDLGMF-DSFVPVTSVTVTLPNGSK 231
Query: 392 IVVTHSGNVKFFNEITLTDAL 454
+ +TH+G VK + + L D L
Sbjct: 232 VPITHTGIVKITDSLILYDVL 252
>ref|XP_010690620.1| PREDICTED: uncharacterized protein LOC104904126 [Beta vulgaris
subsp. vulgaris]
Length = 445
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +2
Query: 275 DCWIVDTRASKHICTFPNLVANSDLLVSPVTIHLPDGTRIVVTHSGNVKFFNEITLTDAL 454
D WI+DT A+ H+ T N + +S +I LP+GTR+V THSG++K N ITLTD L
Sbjct: 330 DLWIIDTGATHHV-TGKNSWLFDLVTISACSIGLPNGTRVVATHSGSLKLSNSITLTDVL 388
>ref|XP_011069452.1| PREDICTED: uncharacterized protein LOC105155276, partial [Sesamum
indicum]
Length = 268
Score = 48.1 bits (113), Expect(2) = 2e-06
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +2
Query: 119 LSIMIQTKISKYLSGH-----NSTNSGDIHTFSHVADYSSIKHKTHFTLSLLSTLDKDCW 283
+S +I+T++ KY +S N DI +++ S +L+ LD W
Sbjct: 114 MSELIRTELQKYFGASEAQTSSSANLNDIEFSGKISENS-----------VLNNLDSHMW 162
Query: 284 IVDTRASKHICTFPNLVANSDLLVSPVTIHLPDGTRIVVTHSG 412
I+D+ A+ H+C +L L +S IHL DGTR + SG
Sbjct: 163 ILDSGATAHMCNNSDLFDKPKLKMSDACIHLADGTRHSIKGSG 205
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 1 GYPDWYKELKDQRAR 45
GYPDWYK L DQR +
Sbjct: 73 GYPDWYKTLVDQRKK 87
>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
gi|7267797|emb|CAB81200.1| putative retrotransposon
polyprotein [Arabidopsis thaliana]
Length = 1203
Score = 56.2 bits (134), Expect = 2e-06
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +2
Query: 218 SSIKHKTHFTLSLLSTLDKDCWIVDTRASKHICTFPNLVANSDLL-VSPVTIHLPDGTRI 394
+++ + H SL + L D WI+D+ AS H+C+ +L +L+ VS VT+ LP+GTR+
Sbjct: 78 NNLTFQNHTLSSLQNVLSSDAWIIDSGASSHVCS--DLTMFRELIHVSGVTVTLPNGTRV 135
Query: 395 VVTHSGNVKFFNEITLTDAL 454
+TH+G + + + L + L
Sbjct: 136 AITHTGTICITSTLILHNVL 155
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
score: 11.19) [Arabidopsis thaliana]
Length = 1633
Score = 56.2 bits (134), Expect = 2e-06
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +2
Query: 218 SSIKHKTHFTLSLLSTLDKDCWIVDTRASKHICTFPNLVANSDLL-VSPVTIHLPDGTRI 394
+++ + H SL + L D WI+D+ AS H+C+ +L +L+ VS VT+ LP+GTR+
Sbjct: 376 NNLTFQNHTLSSLQNVLSSDAWIIDSGASSHVCS--DLTMFRELIHVSGVTVTLPNGTRV 433
Query: 395 VVTHSGNVKFFNEITLTDAL 454
+TH+G + + + L + L
Sbjct: 434 AITHTGTICITSTLILHNVL 453