BLASTX nr result

ID: Rehmannia28_contig00053029 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00053029
         (499 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013624837.1| PREDICTED: uncharacterized protein LOC106331...    61   3e-08
ref|XP_013724256.1| PREDICTED: uncharacterized protein LOC106428...    61   4e-08
ref|XP_010431602.1| PREDICTED: uncharacterized protein LOC104715...    57   5e-07
ref|XP_010431016.1| PREDICTED: putative nuclease HARBI1 [Camelin...    56   3e-06

>ref|XP_013624837.1| PREDICTED: uncharacterized protein LOC106331018 [Brassica oleracea
           var. oleracea]
          Length = 256

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 42/99 (42%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -1

Query: 364 SNNWSSRIFL---KPNAST*GDSVPDHKVIYCDREPVALHLFN*LFS*NPTHMKKCFSGV 194
           SNN S+  FL   + N+ T G SVP    IY DRE     LFN  FS  PT+    F   
Sbjct: 42  SNNNSAIHFLLNQQDNSVTHGGSVPGRSFIYRDRESAHFRLFNDYFSETPTYNDDMFRRR 101

Query: 193 F*MS*DLFLRIVHAGKNYDG*FVQRMDATKRLGYCHFKK 77
           + MS  LFLRIV A + YD  F+Q  D   R G    +K
Sbjct: 102 YRMSRSLFLRIVDAVERYDNYFIQWRDTMGRFGLSSLQK 140


>ref|XP_013724256.1| PREDICTED: uncharacterized protein LOC106428060 [Brassica napus]
          Length = 411

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 37/79 (46%), Positives = 42/79 (53%)
 Frame = -1

Query: 313 GDSVPDHKVIYCDREPVALHLFN*LFS*NPTHMKKCFSGVF*MS*DLFLRIVHAGKNYDG 134
           G SVP    IY DRE     LFN  FS NPT+    F   + MS  LFL IV+A KN+D 
Sbjct: 37  GGSVPGRSFIYLDRESAHYRLFNDYFSKNPTYNDAMFRRRYRMSRPLFLHIVNAVKNHDN 96

Query: 133 *FVQRMDATKRLGYCHFKK 77
            F QR D   RLG    +K
Sbjct: 97  YFKQRRDIIGRLGLSSLQK 115


>ref|XP_010431602.1| PREDICTED: uncharacterized protein LOC104715936 [Camelina sativa]
          Length = 377

 Score = 57.4 bits (137), Expect(3) = 5e-07
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = -1

Query: 364 SNNWSSRIFL---KPNAST*GDSVPDHKVIYCDREPVALHLFN*LFS*NPTHMKKCFSGV 194
           +NN S   FL   + N +  G SVP+   I+ DRE     LFN  FS NP + +  F   
Sbjct: 19  ANNNSVIQFLLNQQKNQAIHGGSVPERSFIHRDRESAHDRLFNDYFSENPKYNEATFRRR 78

Query: 193 F*MS*DLFLRIVHAGKNYDG*FVQRMDATKRLGYCHFKK 77
           F MS  LFLRI+H  ++++  F QR D++ RLG    +K
Sbjct: 79  FRMSRLLFLRIIHQVESHENYFTQRRDSSGRLGLSSLQK 117



 Score = 21.9 bits (45), Expect(3) = 5e-07
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 45  MPTYAIDEYINVG 7
           +P  AIDEYI +G
Sbjct: 129 LPADAIDEYIKIG 141



 Score = 20.4 bits (41), Expect(3) = 5e-07
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 95  LLPLQKITTLFRIL 54
           L  LQKIT +FR+L
Sbjct: 112 LSSLQKITAVFRML 125


>ref|XP_010431016.1| PREDICTED: putative nuclease HARBI1 [Camelina sativa]
          Length = 407

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -1

Query: 307 SVPDHKVIYCDREPVALHLFN*LFS*NPTHMKKCFSGVF*MS*DLFLRIVHAGKNYDG*F 128
           S+P HKVI  DRE  + +LFN  F+ NP   +  F   + MS  LFLRI  A +++D  F
Sbjct: 23  SIPGHKVINRDRENASRNLFNDYFADNPLFPETMFRRRYQMSRPLFLRIYEAIQSHDNYF 82

Query: 127 VQRMDATKRLGYCHFKK 77
           VQR D   +LG    +K
Sbjct: 83  VQRRDGVGKLGLSGLQK 99


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