BLASTX nr result

ID: Rehmannia28_contig00052074 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00052074
         (558 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096581.1| PREDICTED: probable 9-cis-epoxycarotenoid di...    69   2e-10
ref|XP_009783401.1| PREDICTED: probable 9-cis-epoxycarotenoid di...    64   1e-08
ref|XP_006449708.1| hypothetical protein CICLE_v10014639mg [Citr...    59   5e-07

>ref|XP_011096581.1| PREDICTED: probable 9-cis-epoxycarotenoid dioxygenase NCED5,
           chloroplastic [Sesamum indicum]
          Length = 603

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
 Frame = -3

Query: 265 AQPNSSSWAGAQF-----PSTSLVELGFPSKSISMKKPTRRPISSC------ILTLPKQP 119
           A+ NSSS A  QF       +SLVEL  PSKS S++KPTR     C      +LTLPK+P
Sbjct: 6   AKTNSSSCAAPQFLHPLSSKSSLVELSSPSKSFSVRKPTRGAKIHCALHSPSVLTLPKRP 65

Query: 118 FQKPTLPIKDSXXXXXXXXXXXXXQWNLIQRMTAKTLDA 2
           FQ PTLP  DS              WNL+Q+  A+ LDA
Sbjct: 66  FQTPTLPKTDS--PAHPPAPPLPPHWNLLQKAAAQALDA 102


>ref|XP_009783401.1| PREDICTED: probable 9-cis-epoxycarotenoid dioxygenase NCED5,
           chloroplastic [Nicotiana sylvestris]
          Length = 599

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
 Frame = -3

Query: 256 NSSSWAGAQFP---------STSLVELGFPSKSISMKKPTRRPISSC------ILTLPKQ 122
           N  +WA  Q P         + S V+LGFPSKSISM+KPT R    C      +LT PKQ
Sbjct: 7   NFYTWAKVQVPHPFSSSNSSTCSPVDLGFPSKSISMRKPTPRAKIQCALHSPAVLTFPKQ 66

Query: 121 PFQKPTLPIKDSXXXXXXXXXXXXXQWNLIQRMTAKTLD 5
           P+Q PT+  +D+              WNL Q+  AK LD
Sbjct: 67  PYQYPTITKRDT-------PSPPQPAWNLFQKAAAKALD 98


>ref|XP_006449708.1| hypothetical protein CICLE_v10014639mg [Citrus clementina]
           gi|83628260|gb|ABC26010.1| 9-cis-epoxycarotenoid
           dioxygenase 5 [Citrus clementina]
           gi|557552319|gb|ESR62948.1| hypothetical protein
           CICLE_v10014639mg [Citrus clementina]
          Length = 609

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
 Frame = -3

Query: 280 MGSSVAQPNSSSWAGAQFP---STSLVELGFPSKSISMKKPTRRPI-------SSCILTL 131
           M +S   PNS SW  +Q     S+SLV++GFP+KSI++KK   + +       S  +L  
Sbjct: 1   MAASTTSPNSCSWGKSQILNPFSSSLVDMGFPTKSIALKKKPNKSLKVESALHSPSVLHF 60

Query: 130 PKQPFQKPTLPIKDS-----XXXXXXXXXXXXXQWNLIQRMTAKTLD 5
           PKQP+Q P +  +DS                  QWN +QR  A  LD
Sbjct: 61  PKQPYQNPVITRQDSTAKPENKSNKSQGQTQQSQWNPLQRAAAMALD 107


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