BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00051978
         (304 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDZ90521.1| conserved hypothetical protein [Rhodococcus rube...    79   1e-16
emb|CCI51800.1| conserved hypothetical protein [Tetrasphaera jen...    72   1e-14
emb|CCH69100.1| conserved hypothetical protein [Tetrasphaera elo...    69   4e-13
gb|EFL01765.1| conserved hypothetical protein, partial [Streptom...    60   3e-12
gb|AGO88040.1| hypothetical protein [uncultured bacterium 122006...    60   2e-09
gb|EFL14388.1| conserved hypothetical protein, partial [Streptom...    57   8e-09
gb|EFL40575.1| hypothetical protein SSRG_03379 [Streptomyces gri...    57   9e-09
gb|KFI74193.1| peptide YY [Bifidobacterium pseudocatenulatum DSM...    59   1e-08
gb|EFK98589.1| conserved hypothetical protein, partial [Streptom...    45   5e-08
gb|EDT79926.1| unknown protein [Clostridium botulinum NCTC 2916]       53   3e-07
gb|AAN44146.1| hypothetical protein SF2650 [Shigella flexneri 2a...    52   3e-06
gb|ELC06673.1| hypothetical protein WCM_04769, partial [Escheric...    42   3e-06
gb|EQW37646.1| hypothetical protein G903_04242, partial [Escheri...    40   4e-06
gb|EFF93458.1| hypothetical protein SSTG_03777 [Streptomyces sp....    50   6e-06
gb|EFF89937.1| hypothetical protein SSTG_00255 [Streptomyces sp....    50   6e-06
gb|ELD18608.1| hypothetical protein A15U_04539, partial [Escheri...    40   9e-06

>emb|CDZ90521.1| conserved hypothetical protein [Rhodococcus ruber]
           gi|697989431|emb|CDZ90311.1| conserved hypothetical
           protein [Rhodococcus ruber]
          Length = 161

 Score = 79.0 bits (193), Expect = 1e-16
 Identities = 52/99 (52%), Positives = 59/99 (59%)
 Frame = -3

Query: 299 LSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRAS 120
           LS +LPVVALV  Y TN LIGRG I          F P+   P V SGI   F  L R++
Sbjct: 64  LSGRLPVVALVGRYPTNKLIGRGPI-----LHRKTFPPRNMHPEVLSGIRPSFPGLSRSA 118

Query: 119 R*ITHVLSTLAPLQHPNIATRMLALDLHVLSLPPAFVLS 3
             ITHVL T +PL HP  A+   + DLHVLS PPAFVLS
Sbjct: 119 GQITHVLLTRSPLIHP--ASWASSFDLHVLSTPPAFVLS 155


>emb|CCI51800.1| conserved hypothetical protein [Tetrasphaera jenkinsii Ben 74]
          Length = 103

 Score = 72.4 bits (176), Expect = 1e-14
 Identities = 50/99 (50%), Positives = 61/99 (61%)
 Frame = -3

Query: 299 LSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRAS 120
           LS +LPVVALVS YLTN LIGR  I   + F++ A   +     + SGISS F  LF++ 
Sbjct: 6   LSGRLPVVALVSRYLTNKLIGRESIPDRKTFQTVAMRLR-----LVSGISSCFQLLFQSL 60

Query: 119 R*ITHVLSTLAPLQHPNIATRMLALDLHVLSLPPAFVLS 3
             +THVL T +PL     A+     DLHVLS PPAFVLS
Sbjct: 61  GQVTHVLLTRSPLIRG--ASSSSPFDLHVLSTPPAFVLS 97


>emb|CCH69100.1| conserved hypothetical protein [Tetrasphaera elongata Lp2]
          Length = 130

 Score = 69.3 bits (168), Expect = 4e-13
 Identities = 50/99 (50%), Positives = 60/99 (60%)
 Frame = -3

Query: 299 LSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRAS 120
           LS +LPVVALVS YLTN LIGR  I   + F++      E    + SGISS F  LF++ 
Sbjct: 33  LSGRLPVVALVSHYLTNKLIGRESIPDRKTFQT-----VEMPLRLVSGISSCFQLLFQSL 87

Query: 119 R*ITHVLSTLAPLQHPNIATRMLALDLHVLSLPPAFVLS 3
             +THVL T +PL     A+     DLHVLS PPAFVLS
Sbjct: 88  GQVTHVLLTRSPL--IGGASSSSPFDLHVLSTPPAFVLS 124


>gb|EFL01765.1| conserved hypothetical protein, partial [Streptomyces sp. SPB78]
          Length = 69

 Score = 59.7 bits (143), Expect(2) = 3e-12
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -2

Query: 303 RPLRPATRRRLGEPLPHQLADRPRAYRKVPGLS 205
           RPLRPATRRRLGEPLPHQLADRPRA+   P LS
Sbjct: 1   RPLRPATRRRLGEPLPHQLADRPRAHPAPPELS 33



 Score = 38.5 bits (88), Expect(2) = 3e-12
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -1

Query: 217 ARPFGPQLSIPRNAPQESHPALARLSASYSGLRGKLPTC*APLRH 83
           A P  P+LS  ++A    +P L  +S +   ++G+LPTC +P+RH
Sbjct: 25  AHPAPPELSTAKDAQGSEYPVLDPVSRACPRVQGRLPTCYSPVRH 69


>gb|AGO88040.1| hypothetical protein [uncultured bacterium 122006-I05]
          Length = 162

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 43/100 (43%), Positives = 55/100 (55%)
 Frame = -3

Query: 302 VLSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRA 123
           +LSDQLP++ALVS YLTN LIG   I K     +    PK  +    SGIS  F+ L ++
Sbjct: 60  ILSDQLPIIALVSFYLTNKLIGHRPIQKHDPKTALTTYPKGFA--ALSGISPAFAGLSQS 117

Query: 122 SR*ITHVLSTLAPLQHPNIATRMLALDLHVLSLPPAFVLS 3
              +T+ L T  P+         + LDLHVL  PPA VLS
Sbjct: 118 LGQVTYALLTRPPVY--LFPEGNVLLDLHVLGTPPALVLS 155


>gb|EFL14388.1| conserved hypothetical protein, partial [Streptomyces sp. C]
          Length = 84

 Score = 57.0 bits (136), Expect = 8e-09
 Identities = 37/76 (48%), Positives = 44/76 (57%)
 Frame = -3

Query: 299 LSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRAS 120
           LS +LPVVALV  Y TN LIGRGLI   ++F+ P         GV SGI   F  L ++ 
Sbjct: 4   LSGRLPVVALVGHYPTNKLIGRGLILHRRSFQLPPM-----QAGVLSGIRPRFQGLSQSE 58

Query: 119 R*ITHVLSTLAPLQHP 72
             I HVL T +PL HP
Sbjct: 59  GQIAHVLLTRSPLIHP 74


>gb|EFL40575.1| hypothetical protein SSRG_03379 [Streptomyces griseoflavus Tu4000]
          Length = 86

 Score = 57.0 bits (136), Expect = 9e-09
 Identities = 37/73 (50%), Positives = 43/73 (58%)
 Frame = -3

Query: 299 LSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRAS 120
           LS +LPVVALVS YLTN LIGRGLI         +F P +   GV SGI   F  L ++ 
Sbjct: 6   LSGRLPVVALVSHYLTNKLIGRGLI-----LHRRSFQPLQMPAGVISGIRPRFQGLSQSE 60

Query: 119 R*ITHVLSTLAPL 81
             I HVL T +PL
Sbjct: 61  GQIAHVLLTRSPL 73


>gb|KFI74193.1| peptide YY [Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200
           = LMG 10505]
          Length = 166

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -2

Query: 294 RPATRRRL-GEPLPHQLADRPRAYRKVPGLSVPSFQSQGMLPRSLIRH*LAFQRVIPGFA 118
           RPATRRRL   PLP +L DR R +     + + SF +     RS IRH   F   IP + 
Sbjct: 8   RPATRRRLPAGPLPRRLPDRTRPHP----IPMKSFPTPHARSRS-IRHYHPFPGAIPVYG 62

Query: 117 VNYPRVKHPCATPTSEYCYPNVSARLACVKPAASVRSEP 1
               R+ HP AT T++    +   RLACVK AASV  EP
Sbjct: 63  AGRSRITHPFATLTTKQSLMD-PVRLACVKHAASVHPEP 100


>gb|EFK98589.1| conserved hypothetical protein, partial [Streptomyces sp. SPB78]
           gi|302430310|gb|EFL02126.1| conserved hypothetical
           protein, partial [Streptomyces sp. SPB78]
          Length = 62

 Score = 45.4 bits (106), Expect(2) = 5e-08
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 282 RRRLGEPLPHQLADRPRAYRKVPGLS 205
           RRRLGEPLPHQLADRPRA+   P LS
Sbjct: 1   RRRLGEPLPHQLADRPRAHPAPPELS 26



 Score = 38.5 bits (88), Expect(2) = 5e-08
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -1

Query: 217 ARPFGPQLSIPRNAPQESHPALARLSASYSGLRGKLPTC*APLRH 83
           A P  P+LS  ++A    +P L  +S +   ++G+LPTC +P+RH
Sbjct: 18  AHPAPPELSTTKDAQGSEYPVLDPVSRACPRVQGRLPTCYSPVRH 62


>gb|EDT79926.1| unknown protein [Clostridium botulinum NCTC 2916]
          Length = 71

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 32/62 (51%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -3

Query: 185 KECSPGVSSGISSPFSELFRASR*ITHVLSTLAPLQH-PNIATRMLALDLHVLSLPPAFV 9
           K C   +  GI+ PF  L    R +THVL T  PL H P  A+   +LDLHVLS PPAFV
Sbjct: 4   KSCDSPILCGINLPFGRLSPTLRQVTHVLLTRPPLIHFPKEAS---SLDLHVLSTPPAFV 60

Query: 8   LS 3
           LS
Sbjct: 61  LS 62


>gb|AAN44146.1| hypothetical protein SF2650 [Shigella flexneri 2a str. 301]
          Length = 134

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 41/100 (41%), Positives = 55/100 (55%)
 Frame = -3

Query: 302 VLSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRA 123
           +LSDQL +VALVS Y TN LI  G I   +A RSP+   +  +  V + +SS +     +
Sbjct: 5   ILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYA--VLATVSSSYPPPSGS 62

Query: 122 SR*ITHVLSTLAPLQHPNIATRMLALDLHVLSLPPAFVLS 3
              ITH  +T    +  +    +L  DLHVL LPPAF LS
Sbjct: 63  FPDITHPSAT----RQRSSKRFLLPFDLHVLGLPPAFNLS 98


>gb|ELC06673.1| hypothetical protein WCM_04769, partial [Escherichia coli KTE10]
          Length = 151

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = -2

Query: 174 PRSLIRH*LAFQRVIPGF---AVNYPRVKHPCATPTSEYCYPNVSARLACVKPAASVRSE 4
           P  ++RH      V   +   + ++P + HP AT        +V+ RLACV+PAASV+SE
Sbjct: 91  PSLVLRHYAVLATVSSSYPPPSGSFPDITHPSATRQQSSKLLSVTVRLACVRPAASVQSE 150

Query: 3   P 1
           P
Sbjct: 151 P 151



 Score = 35.8 bits (81), Expect(2) = 3e-06
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = -3

Query: 302 VLSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPA 195
           +LSDQL +VALVS Y TN LI  G I   +A RSP+
Sbjct: 57  ILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPS 92


>gb|EQW37646.1| hypothetical protein G903_04242, partial [Escherichia coli UMEA
           3053-1]
          Length = 146

 Score = 40.4 bits (93), Expect(2) = 4e-06
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -2

Query: 114 NYPRVKHPCATPTSEYCYPNVSARLACVKPAASVRSEP 1
           ++P + HP AT         V+ RLACV+PAASV+SEP
Sbjct: 109 SFPDITHPSATRQQSSKLLPVTVRLACVRPAASVQSEP 146



 Score = 37.0 bits (84), Expect(2) = 4e-06
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = -3

Query: 302 VLSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPA 195
           +LSDQL +VALVS Y TN LI  G I   +A RSP+
Sbjct: 52  ILSDQLGIVALVSRYPTNKLIPSGHIRWQEALRSPS 87


>gb|EFF93458.1| hypothetical protein SSTG_03777 [Streptomyces sp. e14]
          Length = 86

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = -3

Query: 299 LSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSP-GVSSGISSPFSELFRA 123
           LS +LPVVALVS YLTN LIGRGLI   ++F      P    P  + SGI   F  L ++
Sbjct: 6   LSGRLPVVALVSRYLTNKLIGRGLILHRRSF------PASKMPWRLVSGIRPRFQGLSQS 59

Query: 122 SR*ITHVLSTLAPL 81
              I HVL T +PL
Sbjct: 60  EGQIAHVLLTRSPL 73


>gb|EFF89937.1| hypothetical protein SSTG_00255 [Streptomyces sp. e14]
          Length = 86

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 36/73 (49%), Positives = 44/73 (60%)
 Frame = -3

Query: 299 LSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPAFNPKECSPGVSSGISSPFSELFRAS 120
           LS +LPVVALVS YLTN LIGRGLI   ++F  PA    +    + SGI   F  L ++ 
Sbjct: 6   LSGRLPVVALVSHYLTNKLIGRGLILHRRSF--PA---SKMPRRLVSGIRPRFQGLSQSE 60

Query: 119 R*ITHVLSTLAPL 81
             I HVL T +PL
Sbjct: 61  GQIAHVLLTRSPL 73


>gb|ELD18608.1| hypothetical protein A15U_04539, partial [Escherichia coli KTE210]
          Length = 151

 Score = 40.4 bits (93), Expect(2) = 9e-06
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -2

Query: 114 NYPRVKHPCATPTSEYCYPNVSARLACVKPAASVRSEP 1
           ++P + HP AT         V+ RLACV+PAASV+SEP
Sbjct: 114 SFPDITHPSATRQQRSKLLPVTVRLACVRPAASVQSEP 151



 Score = 35.8 bits (81), Expect(2) = 9e-06
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = -3

Query: 302 VLSDQLPVVALVSLYLTN*LIGRGLIAKCQAFRSPA 195
           +LSDQL +VALVS Y TN LI  G I   +A RSP+
Sbjct: 57  ILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPS 92