BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00051884
         (517 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098928.1| PREDICTED: double-stranded RNA-binding prote...    82   4e-15
ref|XP_006373199.1| hypothetical protein POPTR_0017s09580g [Popu...    67   7e-10
ref|XP_002275052.3| PREDICTED: double-stranded RNA-binding prote...    62   2e-08
emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]    62   2e-08

>ref|XP_011098928.1| PREDICTED: double-stranded RNA-binding protein 3 [Sesamum indicum]
          Length = 468

 Score = 81.6 bits (200), Expect = 4e-15
 Identities = 64/150 (42%), Positives = 76/150 (50%), Gaps = 38/150 (25%)
 Frame = +1

Query: 100 YQSKTSV----TVGSSQVKVPEIPPELNER----DHEWISKISEAIIKKNPTEMKGSNNS 255
           +QS TS+     +GSSQVK+ E P  L +     D EWISKISEAI  K    + G ++S
Sbjct: 276 HQSITSLGPLQVMGSSQVKIQETPSPLFDEHQRDDLEWISKISEAIKNKYGGTVSGRSHS 335

Query: 256 SSHFYGGKPVYNPFPLP------FPLP------ATDH---------TCSQIGRSTFTGGV 372
           SS FYGGK VYNPF LP      FPLP      +  H         T SQ     F G  
Sbjct: 336 SSIFYGGKAVYNPFALPSWRNLNFPLPDEAAESSRTHKGSNILDPITPSQTAIPEFKGSS 395

Query: 373 YQQNSRS---------IAPAVQVRSVIPVC 435
               S++         IAP VQ+RSVIPVC
Sbjct: 396 TSCGSQTGRPGFSGVRIAPEVQIRSVIPVC 425


>ref|XP_006373199.1| hypothetical protein POPTR_0017s09580g [Populus trichocarpa]
           gi|550319905|gb|ERP50996.1| hypothetical protein
           POPTR_0017s09580g [Populus trichocarpa]
          Length = 487

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 52/141 (36%), Positives = 64/141 (45%), Gaps = 38/141 (26%)
 Frame = +1

Query: 127 GSSQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMKGSNNSS-SHFYGGKPVYNP 294
           G SQV+ PEIP  L E    + EW+   S+ I  K P E +G++NS+ S  Y    +Y P
Sbjct: 293 GKSQVQAPEIPVALEEHLKDEEEWLGTKSDVI--KKPIEKEGTSNSNPSSLYASSSIYRP 350

Query: 295 FPL-------------------------------PFPLPATD-HTCSQ--IGRSTFTGGV 372
           FP                                P P+ +T  HT S   I R  FTGG 
Sbjct: 351 FPFSNTGKPVTSLLDNTSQHESTHISSRIFGSPNPSPMASTSIHTPSNTHIPRPMFTGGF 410

Query: 373 YQQNSRSIAPAVQVRSVIPVC 435
              N   IAPAVQ+RSVIPVC
Sbjct: 411 ---NPHRIAPAVQIRSVIPVC 428


>ref|XP_002275052.3| PREDICTED: double-stranded RNA-binding protein 3 [Vitis vinifera]
           gi|296082307|emb|CBI21312.3| unnamed protein product
           [Vitis vinifera]
          Length = 481

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 50/138 (36%), Positives = 63/138 (45%), Gaps = 34/138 (24%)
 Frame = +1

Query: 124 VGSSQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMK-GSNNSSSHFYGGKPVYN 291
           +G SQVK+PE+P  L E    + EW+   S  I K  PTE +  SN ++S  YG   +Y 
Sbjct: 289 IGRSQVKMPEVPTLLEEHQRDEEEWLDGKSNLIRK--PTEKECPSNANASSVYGANSIYR 346

Query: 292 PFPLP------FPLPATDHTCSQ------------------------IGRSTFTGGVYQQ 381
           PFPLP        LP + H   +                        I R+  TGG    
Sbjct: 347 PFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGIHIPRTMGTGGF--- 403

Query: 382 NSRSIAPAVQVRSVIPVC 435
               IAPAVQ+RSVIPVC
Sbjct: 404 QPHRIAPAVQIRSVIPVC 421


>emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]
          Length = 552

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 50/138 (36%), Positives = 63/138 (45%), Gaps = 34/138 (24%)
 Frame = +1

Query: 124 VGSSQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMK-GSNNSSSHFYGGKPVYN 291
           +G SQVK+PE+P  L E    + EW+   S  I K  PTE +  SN ++S  YG   +Y 
Sbjct: 360 IGRSQVKMPEVPTLLEEHQRDEEEWLDGKSNLIRK--PTEKECPSNANASSVYGANSIYR 417

Query: 292 PFPLP------FPLPATDHTCSQ------------------------IGRSTFTGGVYQQ 381
           PFPLP        LP + H   +                        I R+  TGG    
Sbjct: 418 PFPLPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGIHIPRTMGTGGF--- 474

Query: 382 NSRSIAPAVQVRSVIPVC 435
               IAPAVQ+RSVIPVC
Sbjct: 475 QPHRIAPAVQIRSVIPVC 492