BLASTX nr result
ID: Rehmannia28_contig00051716
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00051716
(498 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011075658.1| PREDICTED: uncharacterized protein LOC105160... 93 1e-30
dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group] 93 9e-29
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 93 9e-29
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 89 3e-28
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 92 1e-27
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 87 2e-27
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 100 3e-27
gb|ABA97403.1| retrotransposon protein, putative, unclassified [... 99 1e-26
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 86 2e-26
ref|XP_008655231.1| PREDICTED: uncharacterized protein LOC100382... 77 8e-26
emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group] 84 2e-25
gb|ACB28472.1| polyprotein [Ananas comosus] 84 3e-25
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 82 1e-24
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 82 1e-24
gb|KYP41804.1| Retrotransposable element Tf2 [Cajanus cajan] 80 1e-24
ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359... 86 2e-24
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 80 2e-24
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 88 3e-24
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ... 88 3e-24
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 79 3e-24
>ref|XP_011075658.1| PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
Length = 1216
Score = 92.8 bits (229), Expect(3) = 1e-30
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +3
Query: 120 MYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSI 299
++Y MK DV WV+ C+IC R K +N YP L QPLP+PEQA + ++ DFIE + NS
Sbjct: 990 LFYWPTMKVDVQEWVRRCEICQRAKHENNPYPGLLQPLPVPEQAWSCVSMDFIEGLPNSD 1049
Query: 300 EKTIILVIIDRFTRYAHFVGLSH 368
K ILV++DR +Y+HF+ L H
Sbjct: 1050 GKDSILVVVDRLPKYSHFLALKH 1072
Score = 47.8 bits (112), Expect(3) = 1e-30
Identities = 22/36 (61%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELF 490
IAKVF + YKLHG P+SI+++R+KV + FWKELF
Sbjct: 1079 IAKVFFDNIYKLHGLPISIISDREKVLPSRFWKELF 1114
Score = 40.0 bits (92), Expect(3) = 1e-30
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 17 IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+G+ +RE +L MH+S++G H G+ GTY RLK + +
Sbjct: 955 VGSHGGIREKVLKTMHDSALGGHSGMQGTYQRLKPLFY 992
>dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group]
Length = 866
Score = 93.2 bits (230), Expect(3) = 9e-29
Identities = 43/95 (45%), Positives = 64/95 (67%)
Frame = +3
Query: 117 KMYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNS 296
+++Y MK V +VK+C +C +NK ++ + L QPLP+PE A +HIT DF+E + S
Sbjct: 473 QLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKS 532
Query: 297 IEKTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K +I VI+DRFT+YAHF+ LSH F + + L +F
Sbjct: 533 EGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQF 567
Score = 43.1 bits (100), Expect(3) = 9e-29
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 410 YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
YKLHG P IV++RD++FT+S WKE+F+
Sbjct: 572 YKLHGLPTVIVSDRDRIFTSSTWKEVFE 599
Score = 37.7 bits (86), Expect(3) = 9e-29
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IRYK---AIGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+RYK +G LRE +L H+S++G H G TY R+K + +
Sbjct: 431 LRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFY 476
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 93.2 bits (230), Expect(3) = 9e-29
Identities = 43/95 (45%), Positives = 64/95 (67%)
Frame = +3
Query: 117 KMYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNS 296
+++Y MK V +VK+C +C +NK ++ + L QPLP+PE A +HIT DF+E + S
Sbjct: 252 QLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKS 311
Query: 297 IEKTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K +I VI+DRFT+YAHF+ LSH F + + L +F
Sbjct: 312 EGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQF 346
Score = 43.1 bits (100), Expect(3) = 9e-29
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 410 YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
YKLHG P IV++RD++FT+S WKE+F+
Sbjct: 351 YKLHGLPTVIVSDRDRIFTSSTWKEVFE 378
Score = 37.7 bits (86), Expect(3) = 9e-29
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IRYK---AIGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+RYK +G LRE +L H+S++G H G TY R+K + +
Sbjct: 210 LRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFY 255
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 88.6 bits (218), Expect(3) = 3e-28
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +3
Query: 117 KMYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNS 296
+M+Y M+ DVL +V+SC +C ++KPD YP L QPL +P QA I+ DFIE + S
Sbjct: 1149 QMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLPRS 1208
Query: 297 IEKTIILVIIDRFTRYAHFVGLSHFFHSSK 386
ILV++D+F++Y HF+ L H F ++K
Sbjct: 1209 AHYNCILVVVDKFSKYGHFLPLLHPFTAAK 1238
Score = 51.2 bits (121), Expect(3) = 3e-28
Identities = 20/38 (52%), Positives = 35/38 (92%), Gaps = 2/38 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFKL 496
+A+VFL+ YKLHG P++I+++RD++FT+SFW++LF++
Sbjct: 1239 VARVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQI 1276
Score = 32.7 bits (73), Expect(3) = 3e-28
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 17 IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+G + L++ +L MH++++G H G TY ++K + +
Sbjct: 1115 LGGNLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFY 1152
>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 592
Score = 91.7 bits (226), Expect(3) = 1e-27
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +3
Query: 120 MYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSI 299
+++ MK +V +VK D+C +N ++ YP L QP+PIPE A THI+ DFIE + S
Sbjct: 329 IFHWPRMKQEVEEFVKLYDVCQKNNCEHVPYPGLLQPIPIPEMAWTHISMDFIEGLPKSE 388
Query: 300 EKTIILVIIDRFTRYAHFVGLSHFF 374
+K +ILV++DRFT+Y+HF+ LSH F
Sbjct: 389 DKEVILVVVDRFTKYSHFIALSHPF 413
Score = 42.4 bits (98), Expect(3) = 1e-27
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
+ KVF++ +K HG P I+TNRD VFT+ W++LFK
Sbjct: 418 VVKVFVDNVFKHHGLPSVIITNRDMVFTSHLWQDLFK 454
Score = 36.2 bits (82), Expect(3) = 1e-27
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLK 118
+RYK IG++T L+ +L H+S++G H G TY RLK
Sbjct: 286 LRYKGRLYIGSNTGLKRQLLVTFHDSALGGHSGGRVTYQRLK 327
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 87.4 bits (215), Expect(3) = 2e-27
Identities = 39/83 (46%), Positives = 57/83 (68%)
Frame = +3
Query: 120 MYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSI 299
++Y MK ++ V+ C +C R+K ++ YP L +PLPIP+ A THI+ DFIE + +S
Sbjct: 944 LFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSK 1003
Query: 300 EKTIILVIIDRFTRYAHFVGLSH 368
K +I V++DRFT+YAH V LSH
Sbjct: 1004 GKEVIFVVVDRFTKYAHSVPLSH 1026
Score = 45.8 bits (107), Expect(3) = 2e-27
Identities = 18/37 (48%), Positives = 31/37 (83%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
+A+ F++ +KLHG P++IV++RD++FT+ W+ELFK
Sbjct: 1033 VAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFK 1069
Score = 36.6 bits (83), Expect(3) = 2e-27
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+RYK +G D LR I+ +H S++G H G TY R+K++ +
Sbjct: 901 LRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFY 946
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 99.8 bits (247), Expect(3) = 3e-27
Identities = 46/94 (48%), Positives = 64/94 (68%)
Frame = +3
Query: 120 MYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSI 299
++Y MK D+ ++VK C +C +NK ++ L P L PLPIPE A THI+ DFIE + S
Sbjct: 919 LFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSD 978
Query: 300 EKTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K +I VI+DRFT+YAHFV LSH F + + + +F
Sbjct: 979 NKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQF 1012
Score = 37.7 bits (86), Expect(3) = 3e-27
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 410 YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
YK HG P IV++RD++FT+ WK++F+
Sbjct: 1017 YKHHGLPAVIVSDRDRIFTSQTWKDVFE 1044
Score = 31.6 bits (70), Expect(3) = 3e-27
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+RYK +G T LR + H+S++G H G TY R K + +
Sbjct: 876 LRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFY 921
>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 562
Score = 99.4 bits (246), Expect(3) = 1e-26
Identities = 45/94 (47%), Positives = 64/94 (68%)
Frame = +3
Query: 120 MYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSI 299
++Y MK D+ ++VK C +C +NK ++ L P L PLP+PE A THI+ DFIE + S
Sbjct: 332 LFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPVPEMAWTHISMDFIEGLPKSD 391
Query: 300 EKTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K +I VI+DRFT+YAHFV LSH F + + + +F
Sbjct: 392 NKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQF 425
Score = 35.8 bits (81), Expect(3) = 1e-26
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 410 YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
YK HG P IV++RD +FT+ WK++F+
Sbjct: 430 YKHHGLPAVIVSDRDIIFTSQTWKDVFE 457
Score = 31.6 bits (70), Expect(3) = 1e-26
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+RYK +G T LR + H+S++G H G TY R K + +
Sbjct: 289 LRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFY 334
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 86.3 bits (212), Expect(3) = 2e-26
Identities = 40/93 (43%), Positives = 62/93 (66%)
Frame = +3
Query: 123 YYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIE 302
+Y + M+ +V ++K CDIC +NK +N L QPLPIP + T I+ DFIE + NS
Sbjct: 1075 FYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLPNSES 1134
Query: 303 KTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
++I+V++DR ++YAHF+ +SH + +SK Q F
Sbjct: 1135 YSVIMVVVDRLSKYAHFIPISHPYTASKIAQVF 1167
Score = 51.6 bits (122), Expect(3) = 2e-26
Identities = 26/38 (68%), Positives = 31/38 (81%), Gaps = 2/38 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFKL 496
IA+VFL +KLHG P SIVT+RD FT++FWKELFKL
Sbjct: 1163 IAQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKELFKL 1200
Score = 28.1 bits (61), Expect(3) = 2e-26
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 35 LRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
LRE IL+ +H+S G H G + T R K+ +
Sbjct: 1045 LREQILYLLHSSPQGGHSGFHKTLHRAKSEFY 1076
>ref|XP_008655231.1| PREDICTED: uncharacterized protein LOC100382585 isoform X1 [Zea mays]
Length = 1543
Score = 76.6 bits (187), Expect(3) = 8e-26
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = +3
Query: 132 QEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIEKTI 311
+ MK+ V ++V+ C IC++ KPD YP QPLP+P A I+ DF+E + S
Sbjct: 1217 KNMKSFVRSFVQQCQICLQAKPDRAAYPGKLQPLPVPPSAWHTISMDFVEGLPRSGSWDC 1276
Query: 312 ILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
ILV++D+F+++ HFV LSH + + Q F
Sbjct: 1277 ILVVVDKFSKFGHFVPLSHPYTAHSVAQLF 1306
Score = 47.0 bits (110), Expect(3) = 8e-26
Identities = 19/38 (50%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFKL 496
+A++FL+ Y+LHG P +IV++RD +FT++FW++LF+L
Sbjct: 1302 VAQLFLSHIYRLHGFPAAIVSDRDPIFTSAFWRQLFQL 1339
Score = 40.4 bits (93), Expect(3) = 8e-26
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNV 124
IRYK IG D HL+ I+ +H+S IG H GV TY R+K++
Sbjct: 1170 IRYKNRLWIGEDPHLQAKIVSALHSSPIGGHSGVPVTYSRVKSI 1213
>emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]
Length = 1012
Score = 84.0 bits (206), Expect(3) = 2e-25
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +3
Query: 138 MKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIEKTIIL 317
MK +L+ +K C +C+++KPD YP L QPLP+PE A ++ DFIE + S IL
Sbjct: 550 MKKMILSLLKQCQVCLQSKPDRAKYPGLLQPLPVPEGAWQVVSLDFIEGLPKSHGFNCIL 609
Query: 318 VIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
V++D+F++YAHF+ L H F ++ Q F
Sbjct: 610 VVVDKFSKYAHFIPLYHPFTTASVAQEF 637
Score = 39.3 bits (90), Expect(3) = 2e-25
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLFA 133
+RYK IGN+T L+ +I+ ++H+S +G H G+ TY R K LFA
Sbjct: 501 LRYKGRIWIGNNTQLQHIIIDELHSSFMGGHSGIPVTYRRAK-ALFA 546
Score = 39.3 bits (90), Expect(3) = 2e-25
Identities = 16/36 (44%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELF 490
+A+ F+ YKLHG P +I+++RD++FT+ W+ LF
Sbjct: 633 VAQEFMTHVYKLHGLPRTIISDRDRIFTSQLWEFLF 668
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 83.6 bits (205), Expect(3) = 3e-25
Identities = 39/93 (41%), Positives = 59/93 (63%)
Frame = +3
Query: 123 YYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIE 302
+Y + ++ DV +V+ C +C +NK + L QPLPIPE T I+ DFIE + NS
Sbjct: 734 FYWKGLRRDVEQFVRECSVCQQNKYETTAPAGLLQPLPIPEGIWTEISMDFIEGLPNSQG 793
Query: 303 KTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K +I+V++DR ++YAHF+ LSH + +S Q F
Sbjct: 794 KEVIMVVVDRLSKYAHFIALSHPYTASSVAQLF 826
Score = 47.8 bits (112), Expect(3) = 3e-25
Identities = 21/37 (56%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
+A++FL+ YKLHG P SIV++RD +F + FW+ELFK
Sbjct: 822 VAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFK 858
Score = 30.8 bits (68), Expect(3) = 3e-25
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 17 IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+G+D L+ ++ H SSIG H G+ T +LK +
Sbjct: 698 VGSDPGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFY 735
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 81.6 bits (200), Expect(3) = 1e-24
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +3
Query: 117 KMYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNS 296
K++Y +K V N +++C +C K ++ P L PL +P+ A THI+ DF+E + S
Sbjct: 562 KLFYWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKS 621
Query: 297 IEKTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K +ILV++DR T+YAHF+ LSH + + +Q F
Sbjct: 622 KGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVF 656
Score = 45.4 bits (106), Expect(3) = 1e-24
Identities = 19/37 (51%), Positives = 33/37 (89%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
+ +VF++ +KLHG P++IVT+RD+VFT++F++E+FK
Sbjct: 652 VVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFK 688
Score = 32.7 bits (73), Expect(3) = 1e-24
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
++YK +G +R ++ H+S+ G H G+ TY R+K + +
Sbjct: 520 MKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFY 565
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 82.0 bits (201), Expect(3) = 1e-24
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = +3
Query: 117 KMYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNS 296
+++ +MK +V+ C IC++ KPD YP L QPLP+PE A I+ DFIE + S
Sbjct: 166 QLFAWPKMKKMTKTFVQQCQICLQAKPDRARYPGLLQPLPVPEGAWQVISLDFIEGLPRS 225
Query: 297 IEKTIILVIIDRFTRYAHFVGLSHFF 374
ILV++D+F++YAHF+ LSH F
Sbjct: 226 DHSNCILVVVDKFSKYAHFLPLSHPF 251
Score = 44.7 bits (104), Expect(3) = 1e-24
Identities = 19/37 (51%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
+AK+F+ +KLHG PL I+++RDKVFT+ W+ LF+
Sbjct: 256 VAKLFMKHIFKLHGLPLVIISDRDKVFTSQLWEHLFE 292
Score = 33.1 bits (74), Expect(3) = 1e-24
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLFA 133
IR+K IG++ L+ +L ++H+S IG H G TY +LK LFA
Sbjct: 124 IRFKGRVWIGDNPTLQSKLLTELHSSPIGGHSGFPVTYRKLKQ-LFA 169
>gb|KYP41804.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 571
Score = 80.5 bits (197), Expect(3) = 1e-24
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3
Query: 126 YLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIEK 305
Y + + DV ++ C C + K DN P L QPLPIP+ HIT DFIE + NS+ K
Sbjct: 205 YWKGLSKDVRRFIHQCPTCQQCKYDNSASPGLLQPLPIPDMIWQHITMDFIEGLPNSLGK 264
Query: 306 TIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
+I V++DR ++ AHF+ L H + +S+ Q F
Sbjct: 265 QVIFVVVDRLSKAAHFMALKHPYTASEVAQCF 296
Score = 40.8 bits (94), Expect(3) = 1e-24
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 17 IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+GND+ LR IL +H+S+ G H G + TY R+K+V++
Sbjct: 168 VGNDSELRRKILDWLHSSASGGHSGRDATYQRIKSVVY 205
Score = 38.5 bits (88), Expect(3) = 1e-24
Identities = 16/34 (47%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKE 484
+A+ F++ YKLHG P SI ++RD VF ++FW++
Sbjct: 292 VAQCFMDNIYKLHGCPASITSDRDPVFISNFWRD 325
>ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359020 [Brassica napus]
Length = 2394
Score = 85.9 bits (211), Expect(3) = 2e-24
Identities = 38/94 (40%), Positives = 59/94 (62%)
Frame = +3
Query: 120 MYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSI 299
++Y + M D+ +++ C +C + K D YP L QPLPIPE T I+ DFI+ + S
Sbjct: 2027 LFYWKGMSKDIQQFIRECQVCQQCKYDTAAYPGLIQPLPIPEAVWTDISLDFIDGLPLSF 2086
Query: 300 EKTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K++ILV++DR T+ AHF+ L+H + +S Q F
Sbjct: 2087 GKSVILVVVDRLTKAAHFIALAHPYTASSVAQSF 2120
Score = 46.2 bits (108), Expect(3) = 2e-24
Identities = 22/38 (57%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFKL 496
+A+ FL+ +KLHG P SIV++RD VF + FWKELF L
Sbjct: 2116 VAQSFLDNIFKLHGMPRSIVSDRDAVFLSDFWKELFSL 2153
Score = 26.9 bits (58), Expect(3) = 2e-24
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 35 LRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
+R IL +H SS G H G + T+ R+K++ +
Sbjct: 1998 IRGSILQWLHGSSAGGHSGRDVTHQRVKSLFY 2029
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 80.5 bits (197), Expect(3) = 2e-24
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +3
Query: 138 MKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIEKTIIL 317
MK V + SC +C++ KPD YP L QPLP+P+ A I+ DFIE + S + IL
Sbjct: 494 MKLTVQKQLASCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFIEGLPKSYHQDCIL 553
Query: 318 VIIDRFTRYAHFVGLSHFF 374
V++D+F++YAHF+ LSH F
Sbjct: 554 VVVDKFSKYAHFMPLSHPF 572
Score = 44.3 bits (103), Expect(3) = 2e-24
Identities = 19/36 (52%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELF 490
+AKVF+ YKLHG P I+++RDK+FT++ W++LF
Sbjct: 577 VAKVFMLNVYKLHGLPQIIISDRDKIFTSALWEQLF 612
Score = 34.3 bits (77), Expect(3) = 2e-24
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = +2
Query: 17 IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNV 124
+GN++++++ I+ +H+S +G H G TY R+K++
Sbjct: 453 VGNNSNIQQQIISALHDSPLGGHSGFPVTYKRIKSL 488
>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1923
Score = 87.8 bits (216), Expect(3) = 3e-24
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3
Query: 135 EMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIEKTII 314
+MK + WVK+C IC + KPD YP L QPLPIPE A ++ DFIE + S I
Sbjct: 590 QMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCI 649
Query: 315 LVIIDRFTRYAHFVGLSHFF 374
LV++D+F+RYAHFV LSH F
Sbjct: 650 LVVVDKFSRYAHFVPLSHPF 669
Score = 38.5 bits (88), Expect(3) = 3e-24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 410 YKLHGNPLSIVTNRDKVFTNSFWKELF 490
YKLHG P ++++RDK+FT+ W+ LF
Sbjct: 683 YKLHGMPKVLISDRDKIFTSKLWEFLF 709
Score = 32.3 bits (72), Expect(3) = 3e-24
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLFA 133
+RYK IG++ L++ ++ +H S IG H G TY R+K LFA
Sbjct: 542 LRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQRVK-ALFA 587
>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1920
Score = 87.8 bits (216), Expect(3) = 3e-24
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +3
Query: 135 EMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNSIEKTII 314
+MK + WVK+C IC + KPD YP L QPLPIPE A ++ DFIE + S I
Sbjct: 590 QMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCI 649
Query: 315 LVIIDRFTRYAHFVGLSHFF 374
LV++D+F+RYAHFV LSH F
Sbjct: 650 LVVVDKFSRYAHFVPLSHPF 669
Score = 38.5 bits (88), Expect(3) = 3e-24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 410 YKLHGNPLSIVTNRDKVFTNSFWKELF 490
YKLHG P ++++RDK+FT+ W+ LF
Sbjct: 683 YKLHGMPKVLISDRDKIFTSKLWEFLF 709
Score = 32.3 bits (72), Expect(3) = 3e-24
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLFA 133
+RYK IG++ L++ ++ +H S IG H G TY R+K LFA
Sbjct: 542 LRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQRVK-ALFA 587
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 79.0 bits (193), Expect(3) = 3e-24
Identities = 37/95 (38%), Positives = 58/95 (61%)
Frame = +3
Query: 117 KMYYLQEMKTDVLNWVKSCDICVRNKPDNGLYPSLSQPLPIPEQASTHITTDFIESIHNS 296
+++Y +K V ++++ C C K ++ P L PL +P+ A THIT DFIE + S
Sbjct: 1218 QLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKS 1277
Query: 297 IEKTIILVIIDRFTRYAHFVGLSHFFHSSKGLQRF 401
K +ILV++DR T+YAHF+ LSH + + +Q F
Sbjct: 1278 QGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIF 1312
Score = 44.3 bits (103), Expect(3) = 3e-24
Identities = 18/37 (48%), Positives = 32/37 (86%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 IAKVFLN--YKLHGNPLSIVTNRDKVFTNSFWKELFK 493
+ ++F++ +KLHG P+ IVT+RD+VFT++F++E+FK
Sbjct: 1308 VVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFK 1344
Score = 35.4 bits (80), Expect(3) = 3e-24
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 2 IRYKA---IGNDTHLRELILFKMHNSSIGSHLGVNGTYMRLKNVLF 130
++YK +G T +R L+L H S G H G+ TY R+K + +
Sbjct: 1176 LKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFY 1221