BLASTX nr result
ID: Rehmannia28_contig00048920
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00048920
(399 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 94 5e-20
gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana] 92 2e-19
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 92 3e-19
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 92 3e-19
ref|XP_012453597.1| PREDICTED: uncharacterized protein LOC105775... 91 5e-19
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 90 1e-18
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 90 1e-18
gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposo... 86 7e-18
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 88 7e-18
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 87 2e-17
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 87 2e-17
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 87 2e-17
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo... 85 2e-17
emb|CDY09583.1| BnaC05g23360D [Brassica napus] 87 2e-17
emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera] 86 3e-17
ref|XP_013668994.1| PREDICTED: uncharacterized protein LOC106373... 86 3e-17
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo... 86 4e-17
gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposo... 86 4e-17
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo... 86 6e-17
ref|XP_010669336.1| PREDICTED: copia protein isoform X2 [Beta vu... 85 1e-16
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 94.4 bits (233), Expect = 5e-20
Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVLLPSGKFFI 227
LF + P YS L+VFGC+CYP LR +HKLQFRS P TFLGY GYK L P+G I
Sbjct: 718 LFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILI 777
Query: 226 SRHVLFEETKFPFSQSYARRSST 158
SR V+F+E FPF+Q +++ T
Sbjct: 778 SRDVIFDEXAFPFAQLQSQKQXT 800
>gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana]
Length = 1313
Score = 92.4 bits (228), Expect = 2e-19
Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 7/86 (8%)
Frame = -3
Query: 388 RPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPS-GKFFISR 221
+PP+YS LRVFGC CYP LRD ++K RS FLGY D GY+ LPS G+ +ISR
Sbjct: 620 KPPEYSALRVFGCACYPTLRDYASNKFDPRSLKCVFLGYNDKYKGYRCFLPSTGRVYISR 679
Query: 220 HVLFEETKFPFSQSYARRSS---TPL 152
HV+F+ET FPF+QS++R +S TPL
Sbjct: 680 HVIFDETVFPFAQSHSRPNSGSLTPL 705
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 92.0 bits (227), Expect = 3e-19
Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPSGKFFI 227
LF P+YS L+VFGCLC+P+LR HKL FRS+P TFLGY GYK L G+ FI
Sbjct: 776 LFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFI 835
Query: 226 SRHVLFEETKFPF 188
SR V F+ETKFPF
Sbjct: 836 SRSVXFDETKFPF 848
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 92.0 bits (227), Expect = 3e-19
Identities = 43/74 (58%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPSGKFFI 227
LF P+YS L+VFGCLC+P+LR HKL FRS+P TFLGY GYK L G+ FI
Sbjct: 530 LFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFI 589
Query: 226 SRHVLFEETKFPFS 185
SR V+F+ET+FPF+
Sbjct: 590 SRSVVFDETRFPFA 603
>ref|XP_012453597.1| PREDICTED: uncharacterized protein LOC105775649 [Gossypium
raimondii]
Length = 619
Score = 91.3 bits (225), Expect = 5e-19
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = -3
Query: 382 PDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPSGKFFISRHVL 212
P Y +LR+FGC CYPYLR HKL+FRS P TFLGY GY+ LLP G+ ISRHV
Sbjct: 387 PTYDHLRIFGCYCYPYLRPFQRHKLEFRSQPCTFLGYSSCHKGYQCLLPDGRIIISRHVE 446
Query: 211 FEETKFPFSQSYAR 170
F E++FP S +R
Sbjct: 447 FNESRFPSPTSLSR 460
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1073
Score = 90.1 bits (222), Expect = 1e-18
Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVLLPSGKFFI 227
LF +PPDY +LR+FGC C+P+LR HKLQFRS FLGY GYK L G+ +I
Sbjct: 377 LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYI 436
Query: 226 SRHVLFEETKFP----FSQSYARRSSTPL 152
S+ V+F ETKFP FS S A S P+
Sbjct: 437 SKDVVFNETKFPYKDLFSSSKASDSQLPI 465
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1408
Score = 90.1 bits (222), Expect = 1e-18
Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVLLPSGKFFI 227
LF +PPDY +LR+FGC C+P+LR HKLQFRS FLGY GYK L G+ +I
Sbjct: 712 LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYI 771
Query: 226 SRHVLFEETKFP----FSQSYARRSSTPL 152
S+ V+F ETKFP FS S A S P+
Sbjct: 772 SKDVVFNETKFPYKDLFSSSKASDSQLPI 800
>gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 243
Score = 85.5 bits (210), Expect = 7e-18
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPSGKFFI 227
LF + PDY L+ FGC C+P+LR T HKL FRS FLGY + GYK L SGK +I
Sbjct: 55 LFKQAPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYI 114
Query: 226 SRHVLFEETKFPFSQSYARRSS 161
S+ V+F ET+FP+ + S+
Sbjct: 115 SKDVIFNETRFPYLDLFQHTST 136
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 88.2 bits (217), Expect = 7e-18
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVLLPS-GKFF 230
LF + PDYS+LRVFGC C+P+LR HKLQFRS TFLGY G+K L PS G+ +
Sbjct: 669 LFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPSTGRVY 728
Query: 229 ISRHVLFEETKFPFSQ 182
ISR V+F+ET FPF++
Sbjct: 729 ISRDVIFDETNFPFAK 744
>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1268
Score = 87.0 bits (214), Expect = 2e-17
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPSGKFFI 227
LF + PDY L+ FGC C+P+LR T HKL FRS FLGY + GYK L SGK +I
Sbjct: 631 LFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYI 690
Query: 226 SRHVLFEETKFPFSQSYARRSSTPL 152
S+ V+F ET+FP+ + + +STP+
Sbjct: 691 SKDVIFNETRFPYLDLF-QHTSTPV 714
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 87.0 bits (214), Expect = 2e-17
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCDGYKVLL----PSGKFF 230
LF R PDY LRVFGCLCYP++R NHKLQ+RS FLGY +K L +G+ +
Sbjct: 646 LFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVY 705
Query: 229 ISRHVLFEETKFPFSQSYARRSS 161
+S HV+F+ET+FPF+Q+ + S
Sbjct: 706 VSPHVVFDETQFPFAQNISSSPS 728
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 87.0 bits (214), Expect = 2e-17
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCDGYKVLL----PSGKFF 230
LF R PDY LRVFGCLCYP++R NHKLQ+RS FLGY +K L +G+ +
Sbjct: 696 LFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVY 755
Query: 229 ISRHVLFEETKFPFSQSYARRSS 161
+S HV+F+ET+FPF+Q+ + S
Sbjct: 756 VSPHVVFDETQFPFAQNISSSPS 778
>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 297
Score = 85.1 bits (209), Expect = 2e-17
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPSGKFFI 227
LF + PDY+ L+ FGC+C+ +LR T HKL FRS FLGY + GYK L SGK +I
Sbjct: 102 LFKQTPDYNFLKTFGCVCFSFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYI 161
Query: 226 SRHVLFEETKFPFSQSYARRSSTPL 152
S+ V+F ET+FP+ + + +STP+
Sbjct: 162 SKDVIFNETRFPYLDLF-QHTSTPV 185
>emb|CDY09583.1| BnaC05g23360D [Brassica napus]
Length = 1187
Score = 86.7 bits (213), Expect = 2e-17
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCDGYKVLL----PSGKFF 230
LF + P+Y+ LRVFGCLC+P+LR T HKL+ RS P FLGY L +G+ +
Sbjct: 382 LFNKSPNYAKLRVFGCLCFPWLRPYTKHKLENRSTPCVFLGYSLSQSAYLCLQQATGRVY 441
Query: 229 ISRHVLFEETKFPFSQSYARRSSTP 155
+SRHV F+ET FPF+QS + + P
Sbjct: 442 VSRHVQFDETTFPFTQSTSPKPDPP 466
>emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]
Length = 685
Score = 86.3 bits (212), Expect = 3e-17
Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVLLPSGKFFI 227
LF P+YS L+VFGC CYP R HKLQFRS TF+GY GYK L +GK +I
Sbjct: 349 LFKTKPNYSFLKVFGCACYPNTRPFNKHKLQFRSTVCTFMGYSLNHKGYKRLDSNGKLYI 408
Query: 226 SRHVLFEETKFPFSQ----SYARRSSTPL 152
SR V+F+ET FPF+Q SY+ +S+ L
Sbjct: 409 SRDVIFDETTFPFAQIDQSSYSIHNSSSL 437
>ref|XP_013668994.1| PREDICTED: uncharacterized protein LOC106373355 [Brassica napus]
gi|923734389|ref|XP_013669225.1| PREDICTED:
uncharacterized protein LOC106373620 [Brassica napus]
Length = 824
Score = 86.3 bits (212), Expect = 3e-17
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVL-LPSGKFF 230
LF R P+Y LRVFGCLC+P+LR T HKL+ RS FLGY Y L LP+G+ +
Sbjct: 559 LFGRSPNYLKLRVFGCLCFPWLRPYTKHKLESRSLSCIFLGYSLTQSAYLCLHLPTGRLY 618
Query: 229 ISRHVLFEETKFPFSQSYARRSSTP 155
+SRHV F ETKFP+S + + S P
Sbjct: 619 VSRHVQFVETKFPYSDAVISQPSPP 643
>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 785
Score = 85.9 bits (211), Expect = 4e-17
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVLLPSGKFFI 227
LF + PDY+ LR+FGC C+P+LR +KLQFRS FLGY GYK L P+G+ FI
Sbjct: 616 LFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQECVFLGYSTSHKGYKCLAPTGRIFI 675
Query: 226 SRHVLFEETKFPFSQSYARRSSTPL 152
S+ V+F ET+FP+ + ++ PL
Sbjct: 676 SKDVVFCETRFPYPSLFPAPATNPL 700
>gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 426
Score = 85.5 bits (210), Expect = 4e-17
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVLLPSGKFFI 227
LF +PPDY+ L+ FGC CYP LR HKL F+S FLGY + GYK L P+GK +I
Sbjct: 175 LFHKPPDYNFLKTFGCGCYPLLRPYNQHKLDFKSHQCLFLGYSNQHKGYKCLSPTGKCYI 234
Query: 226 SRHVLFEETKFPFSQS 179
SRHV F E+ FP+ S
Sbjct: 235 SRHVKFNESFFPYKHS 250
>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1085
Score = 85.5 bits (210), Expect = 6e-17
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYC---DGYKVLLPSGKFFI 227
LF +PPDY +LR+FGC C+P+LR HKLQFRS FLGY GYK L + +I
Sbjct: 584 LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADERLYI 643
Query: 226 SRHVLFEETKFPFSQSYARRSST 158
S V+F ETKFP+ + ++ +++
Sbjct: 644 SNDVVFNETKFPYKELFSSSTAS 666
>ref|XP_010669336.1| PREDICTED: copia protein isoform X2 [Beta vulgaris subsp. vulgaris]
Length = 953
Score = 84.7 bits (208), Expect = 1e-16
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = -3
Query: 397 LFLRPPDYSNLRVFGCLCYPYLRDITNHKLQFRSAPSTFLGYCD---GYKVL-LPSGKFF 230
L+ R P YS+LRVFGCLCYP T +KLQ RS P FLGY GYK L S K
Sbjct: 246 LYQRDPIYSHLRVFGCLCYPLFLSTTINKLQPRSTPCVFLGYPSNHRGYKCYDLSSNKII 305
Query: 229 ISRHVLFEETKFPFSQSYARRSST 158
+SRHV+F+ET+FPF++ ++ SST
Sbjct: 306 LSRHVIFDETQFPFAKLHSPTSST 329