BLASTX nr result
ID: Rehmannia28_contig00048526
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00048526
(372 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015960510.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 72 2e-15
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 71 3e-15
ref|XP_007221452.1| hypothetical protein PRUPE_ppa015033mg, part... 70 3e-15
ref|XP_010064348.1| PREDICTED: uncharacterized protein LOC104451... 67 4e-15
ref|XP_010523613.1| PREDICTED: uncharacterized protein LOC104801... 65 9e-15
gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subc... 68 9e-15
gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor] 67 1e-14
gb|ABD43106.1| reverse transcriptase, partial [Orobanche crenata] 74 1e-14
gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subc... 69 2e-14
gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc... 67 2e-14
ref|XP_012575241.1| PREDICTED: uncharacterized protein LOC101502... 69 2e-14
gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Ja... 69 3e-14
gb|ABD43131.1| reverse transcriptase, partial [Phelipanche ramosa] 74 3e-14
gb|ABD43167.1| reverse transcriptase, partial [Phelipanche tunet... 74 3e-14
gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-... 67 3e-14
emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group] 68 3e-14
gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group... 68 3e-14
gb|ABA91307.1| retrotransposon protein, putative, Ty3-gypsy subc... 67 3e-14
gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japoni... 68 3e-14
gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subc... 68 3e-14
>ref|XP_015960510.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC107484454 [Arachis duranensis]
Length = 1333
Score = 72.0 bits (175), Expect(3) = 2e-15
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FVIIFIDDILVYS ++E ++ IVL+TLR KLY KF KCEFWLDQV
Sbjct: 609 FVIIFIDDILVYSKSATEHEYHLRIVLQTLRDHKLYAKFSKCEFWLDQV 657
Score = 30.8 bits (68), Expect(3) = 2e-15
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV+K PT E+
Sbjct: 659 FLGHVISKDGIMVDPKKVEAVQKWPRPTTVTEI 691
Score = 25.8 bits (55), Expect(3) = 2e-15
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF + S+
Sbjct: 694 FLGLAGYYRRFIKDFSR 710
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 70.9 bits (172), Expect(3) = 3e-15
Identities = 30/49 (61%), Positives = 42/49 (85%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++E+++ IVL+TL+++KLY KF KCEFWL QV
Sbjct: 361 FVVVFIDDILIYSKDEKEHEEHLRIVLQTLKEKKLYAKFSKCEFWLKQV 409
Score = 30.8 bits (68), Expect(3) = 3e-15
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ ++ P K+EAV K PT E+
Sbjct: 411 FLGHVISGDGIQVDPAKIEAVSKWPRPTTVTEI 443
Score = 26.2 bits (56), Expect(3) = 3e-15
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY++F + SK
Sbjct: 446 FLGLAGYYRKFVQDFSK 462
>ref|XP_007221452.1| hypothetical protein PRUPE_ppa015033mg, partial [Prunus persica]
gi|462418182|gb|EMJ22651.1| hypothetical protein
PRUPE_ppa015033mg, partial [Prunus persica]
Length = 717
Score = 70.1 bits (170), Expect(3) = 3e-15
Identities = 30/49 (61%), Positives = 42/49 (85%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FVI+FIDDILVYS + Y+K++ +VL+TLR+++LY KF KC+FWLD+V
Sbjct: 266 FVIVFIDDILVYSQTLEGYKKHLRLVLKTLRRKQLYAKFSKCQFWLDRV 314
Score = 33.1 bits (74), Expect(3) = 3e-15
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+H + + P KVE V PT+A EV
Sbjct: 316 FLGHVIHAEGIYMDPRKVEVVVNWAQPTSATEV 348
Score = 24.6 bits (52), Expect(3) = 3e-15
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLS 69
FLGL GYY RF E S
Sbjct: 351 FLGLAGYYCRFVEGFS 366
>ref|XP_010064348.1| PREDICTED: uncharacterized protein LOC104451368 [Eucalyptus
grandis]
Length = 846
Score = 67.4 bits (163), Expect(3) = 4e-15
Identities = 26/49 (53%), Positives = 40/49 (81%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
F+++FIDDILVYS + ++E+++ VL+TL ++KLY KF KC+FWLD +
Sbjct: 646 FIVVFIDDILVYSKSLEEHEQHLRFVLQTLHEKKLYAKFSKCDFWLDHI 694
Score = 30.4 bits (67), Expect(3) = 4e-15
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV K PTN EV
Sbjct: 696 FLGHVISKDGILVDPKKVEAVVKWNRPTNVIEV 728
Score = 29.6 bits (65), Expect(3) = 4e-15
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSKKTG 57
FLGL GYY+RF E SK G
Sbjct: 731 FLGLAGYYRRFVEGFSKIAG 750
>ref|XP_010523613.1| PREDICTED: uncharacterized protein LOC104801925 [Tarenaya
hassleriana]
Length = 2026
Score = 65.5 bits (158), Expect(3) = 9e-15
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FVIIFIDDIL+YS D +E+++ +VL+ LR++KLY KF KC FWL +V
Sbjct: 1286 FVIIFIDDILIYSPDRRSHEQHLRLVLQRLREQKLYAKFSKCAFWLQEV 1334
Score = 33.5 bits (75), Expect(3) = 9e-15
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + ++ P K+EAV + PTNA E+
Sbjct: 1336 FLGHVISAQGVQVDPAKIEAVMEWKTPTNATEI 1368
Score = 27.3 bits (59), Expect(3) = 9e-15
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E +K
Sbjct: 1371 FLGLAGYYRRFVEGFAK 1387
>gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1030
Score = 67.8 bits (164), Expect(3) = 9e-15
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 386 FVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEV 434
Score = 30.0 bits (66), Expect(3) = 9e-15
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + PTKVEAV + AP + E+
Sbjct: 436 FLGHVISAGGVAVDPTKVEAVTEWKAPKSVTEI 468
Score = 28.5 bits (62), Expect(3) = 9e-15
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 471 FLGLAGYYRRFIEGFSK 487
>gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor]
Length = 924
Score = 66.6 bits (161), Expect(3) = 1e-14
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDILVYS ++E+++ +VLE LR+ +LY KF KCEFWL++V
Sbjct: 141 FVVVFIDDILVYSASAEEHEQHLRVVLEKLRQNQLYAKFSKCEFWLEEV 189
Score = 30.0 bits (66), Expect(3) = 1e-14
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHVL + + P K+EAV++ P NA ++
Sbjct: 191 FLGHVLTAEGVAVDPAKIEAVKEWEQPRNATDI 223
Score = 29.3 bits (64), Expect(3) = 1e-14
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 226 FLGLAGYYRRFIENFSK 242
>gb|ABD43106.1| reverse transcriptase, partial [Orobanche crenata]
Length = 143
Score = 74.3 bits (181), Expect = 1e-14
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWL 235
FVI+FIDDILVYS D Q+++++ I LETLRKEKLY KFKKCEFWL
Sbjct: 98 FVIVFIDDILVYSKDKEQHQEHLRITLETLRKEKLYAKFKKCEFWL 143
>gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1299
Score = 69.3 bits (168), Expect(3) = 2e-14
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ K++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 591 FVVVFIDDILIYSKDEEEHAKHLRLVLEKLRKHKLYAKFSKCEFWLKEV 639
Score = 28.9 bits (63), Expect(3) = 2e-14
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV K AP + E+
Sbjct: 641 FLGHVISAGGVAVDPAKVEAVTKCKAPKSMTEI 673
Score = 27.3 bits (59), Expect(3) = 2e-14
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E S+
Sbjct: 676 FLGLAGYYRRFIEGFSR 692
>gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 67.4 bits (163), Expect(3) = 2e-14
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 539 FVVVFIDDILIYSKDEEEHVEHLRLVLEKLRKHKLYAKFSKCEFWLKEV 587
Score = 29.6 bits (65), Expect(3) = 2e-14
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV K AP + E+
Sbjct: 589 FLGHVISAGGVAVDPAKVEAVTKWKAPKSVTEI 621
Score = 28.5 bits (62), Expect(3) = 2e-14
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 624 FLGLAGYYRRFIEGFSK 640
>ref|XP_012575241.1| PREDICTED: uncharacterized protein LOC101502180 [Cicer arietinum]
Length = 1089
Score = 68.6 bits (166), Expect(3) = 2e-14
Identities = 29/49 (59%), Positives = 42/49 (85%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FVI+FIDDILVYS ++E+++++VL+TLR ++LYVKF KC+FWLD +
Sbjct: 907 FVIVFIDDILVYSKSKEEHERHLMLVLQTLRDKQLYVKFLKCQFWLDSL 955
Score = 30.0 bits (66), Expect(3) = 2e-14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P+KVEAV+ PT E+
Sbjct: 957 FLGHVVSKNGISVDPSKVEAVQSWPRPTTVKEI 989
Score = 26.9 bits (58), Expect(3) = 2e-14
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF + SK
Sbjct: 992 FLGLAGYYRRFVKDFSK 1008
>gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Japonica Group]
gi|21672044|gb|AAM74406.1|AC120497_6 Putative
retroelement [Oryza sativa Japonica Group]
gi|31430958|gb|AAP52803.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 986
Score = 69.3 bits (168), Expect(3) = 3e-14
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ K++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 206 FVVVFIDDILIYSKDEEEHAKHLRLVLEKLRKHKLYAKFSKCEFWLKEV 254
Score = 28.5 bits (62), Expect(3) = 3e-14
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 291 FLGLAGYYRRFIEGFSK 307
Score = 26.9 bits (58), Expect(3) = 3e-14
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGH++ + P KVEA+ + AP + E+
Sbjct: 256 FLGHIISAGGVVVDPAKVEAITEWKAPKSVTEI 288
>gb|ABD43131.1| reverse transcriptase, partial [Phelipanche ramosa]
Length = 143
Score = 73.6 bits (179), Expect = 3e-14
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWL 235
FVI+FIDDILVYS D Q+ +++ I LETLRKEKLY KFKKCEFWL
Sbjct: 98 FVIVFIDDILVYSKDEEQHREHLRITLETLRKEKLYAKFKKCEFWL 143
>gb|ABD43167.1| reverse transcriptase, partial [Phelipanche tunetana]
Length = 143
Score = 73.6 bits (179), Expect = 3e-14
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWL 235
FVI+FIDDILVYS D Q+ +++ I LETLRKEKLY KFKKCEFWL
Sbjct: 98 FVIVFIDDILVYSKDEEQHREHLRIALETLRKEKLYAKFKKCEFWL 143
>gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550206|gb|ABA93003.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1436
Score = 67.4 bits (163), Expect(3) = 3e-14
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 690 FVVVFIDDILIYSKDEEEHVEHLRLVLEKLRKHKLYAKFSKCEFWLKEV 738
Score = 29.3 bits (64), Expect(3) = 3e-14
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSKKT 60
FLGL GYY+RF E SK T
Sbjct: 775 FLGLAGYYRRFIEGFSKIT 793
Score = 27.7 bits (60), Expect(3) = 3e-14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV + AP + E+
Sbjct: 740 FLGHVISAGGVVVDPAKVEAVTEWKAPKSVTEI 772
>emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group]
Length = 1402
Score = 67.8 bits (164), Expect(3) = 3e-14
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 625 FVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEV 673
Score = 28.5 bits (62), Expect(3) = 3e-14
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 710 FLGLAGYYRRFIEGFSK 726
Score = 28.1 bits (61), Expect(3) = 3e-14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV + AP + E+
Sbjct: 675 FLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEI 707
>gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711716|gb|ABF99511.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1312
Score = 67.8 bits (164), Expect(3) = 3e-14
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 605 FVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEV 653
Score = 28.5 bits (62), Expect(3) = 3e-14
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 690 FLGLAGYYRRFIEGFSK 706
Score = 28.1 bits (61), Expect(3) = 3e-14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV + AP + E+
Sbjct: 655 FLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEI 687
>gb|ABA91307.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1284
Score = 66.6 bits (161), Expect(3) = 3e-14
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VL+ LRK KLY KF KCEFWL +V
Sbjct: 690 FVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEFWLKEV 738
Score = 30.0 bits (66), Expect(3) = 3e-14
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGLVGYY+RF E SK
Sbjct: 775 FLGLVGYYRRFIEGFSK 791
Score = 27.7 bits (60), Expect(3) = 3e-14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV + AP + E+
Sbjct: 740 FLGHVISAGGVAVDPAKVEAVMEWKAPKSVTEI 772
>gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 823
Score = 67.8 bits (164), Expect(3) = 3e-14
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 141 FVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEV 189
Score = 28.5 bits (62), Expect(3) = 3e-14
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 226 FLGLAGYYRRFIEGFSK 242
Score = 28.1 bits (61), Expect(3) = 3e-14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV + AP + E+
Sbjct: 191 FLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEI 223
>gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 522
Score = 67.8 bits (164), Expect(3) = 3e-14
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = -1
Query: 372 FVIIFIDDILVYSNDI*QYEKYIIIVLETLRKEKLYVKFKKCEFWLDQV 226
FV++FIDDIL+YS D ++ +++ +VLE LRK KLY KF KCEFWL +V
Sbjct: 27 FVVVFIDDILIYSKDEEEHAEHLQLVLEKLRKHKLYAKFSKCEFWLKEV 75
Score = 28.5 bits (62), Expect(3) = 3e-14
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 116 FLGLVGYYKRFNERLSK 66
FLGL GYY+RF E SK
Sbjct: 112 FLGLAGYYRRFIEGFSK 128
Score = 28.1 bits (61), Expect(3) = 3e-14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 220 FLGHVLH*KVLKSTPTKVEAVEKGLAPTNANEV 122
FLGHV+ + P KVEAV + AP + E+
Sbjct: 77 FLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEI 109