BLASTX nr result
ID: Rehmannia28_contig00048222
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00048222
(336 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010095473.1| hypothetical protein L484_014900 [Morus nota... 160 2e-48
ref|XP_010110617.1| hypothetical protein L484_000603 [Morus nota... 153 1e-44
ref|XP_010110117.1| hypothetical protein L484_003433 [Morus nota... 149 5e-43
ref|XP_010089825.1| hypothetical protein L484_022341 [Morus nota... 138 7e-40
gb|ABI34376.1| Polyprotein, putative [Solanum demissum] 142 6e-39
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 142 4e-37
ref|XP_010099335.1| hypothetical protein L484_000113 [Morus nota... 134 1e-36
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 140 1e-36
ref|XP_010087941.1| Retrovirus-related Pol polyprotein from tran... 122 3e-31
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 124 5e-31
ref|XP_009803853.1| PREDICTED: uncharacterized protein LOC104249... 110 4e-28
ref|XP_009602612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 110 1e-26
ref|XP_010108259.1| Retrovirus-related Pol polyprotein from tran... 107 1e-25
ref|XP_009798005.1| PREDICTED: uncharacterized protein LOC104244... 102 2e-25
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 106 1e-24
ref|XP_008650298.1| PREDICTED: uncharacterized protein LOC103631... 103 3e-24
ref|XP_008650161.1| PREDICTED: uncharacterized protein LOC103630... 103 3e-24
ref|XP_008650230.1| PREDICTED: uncharacterized protein LOC103630... 103 3e-24
ref|XP_008650258.1| PREDICTED: uncharacterized protein LOC103631... 103 4e-24
ref|XP_008650257.1| PREDICTED: uncharacterized protein LOC103631... 103 4e-24
>ref|XP_010095473.1| hypothetical protein L484_014900 [Morus notabilis]
gi|587871180|gb|EXB60447.1| hypothetical protein
L484_014900 [Morus notabilis]
Length = 181
Score = 160 bits (406), Expect = 2e-48
Identities = 79/111 (71%), Positives = 89/111 (80%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA YILN VPSKSI KTPLELW G K SL H RIWGCPAHVLKGKT KL P+SEV +F
Sbjct: 27 LRTAAYILNRVPSKSILKTPLELWCGRKPSLRHVRIWGCPAHVLKGKTGKLEPKSEVCMF 86
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEELLSD 335
VGYP GT+ G FY + QKV VSTNA FLE+DY+ +F RSK++LEELLSD
Sbjct: 87 VGYPDGTKEGFFYSPEDQKVFVSTNATFLEHDYMIDFKPRSKIVLEELLSD 137
>ref|XP_010110617.1| hypothetical protein L484_000603 [Morus notabilis]
gi|587940551|gb|EXC27156.1| hypothetical protein
L484_000603 [Morus notabilis]
Length = 246
Score = 153 bits (387), Expect = 1e-44
Identities = 75/111 (67%), Positives = 86/111 (77%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+T YILN VPSKSI KTPLELW G K L H RIWGCPAHVLKGKT KL P+SE+ +F
Sbjct: 20 LRTTAYILNRVPSKSIPKTPLELWCGRKPRLRHVRIWGCPAHVLKGKTGKLEPKSEICMF 79
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEELLSD 335
VGY GT+ G FY + QKV VSTNA FLE+DY+ +F RSK++LEELLSD
Sbjct: 80 VGYLDGTKRGFFYSPEDQKVFVSTNATFLEHDYMIDFNPRSKIVLEELLSD 130
>ref|XP_010110117.1| hypothetical protein L484_003433 [Morus notabilis]
gi|587938493|gb|EXC25220.1| hypothetical protein
L484_003433 [Morus notabilis]
Length = 231
Score = 149 bits (375), Expect = 5e-43
Identities = 71/101 (70%), Positives = 81/101 (80%)
Frame = +3
Query: 33 VPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLFVGYPKGTRGG 212
VPSKS+ KTPLELWNG K+SL H RIWGCP HVL+ KT KL P SEV +FVGYP+GTRGG
Sbjct: 61 VPSKSVPKTPLELWNGQKLSLRHIRIWGCPTHVLRQKTGKLEPWSEVCIFVGYPQGTRGG 120
Query: 213 LFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEELLSD 335
LFY QKV VSTNA FLE+DY+ +F SK++LEELLSD
Sbjct: 121 LFYSQADQKVFVSTNATFLEHDYMIDFKPISKIVLEELLSD 161
>ref|XP_010089825.1| hypothetical protein L484_022341 [Morus notabilis]
gi|587848153|gb|EXB38441.1| hypothetical protein
L484_022341 [Morus notabilis]
Length = 145
Score = 138 bits (347), Expect = 7e-40
Identities = 66/111 (59%), Positives = 83/111 (74%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
LQTA Y+LN V +KS+ KTP E+W G K SLNH RIWGC AHVL + KL RSEV +F
Sbjct: 16 LQTACYLLNNVSTKSVPKTPHEVWTGRKTSLNHIRIWGCLAHVLDKEANKLEARSEVCIF 75
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEELLSD 335
VGY +GT+GG FY+ ++ KV+VSTNA FLE YI +F RSK++L+E+ SD
Sbjct: 76 VGYLRGTKGGYFYNPKENKVVVSTNATFLEESYINDFKPRSKMVLKEMSSD 126
>gb|ABI34376.1| Polyprotein, putative [Solanum demissum]
Length = 380
Score = 142 bits (358), Expect = 6e-39
Identities = 64/107 (59%), Positives = 86/107 (80%)
Frame = +3
Query: 6 QTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLFV 185
+TA YILN+V SK + TP++LW G K SL H R+WGCPAHVLKGKT KL P++EV +F+
Sbjct: 34 ETANYILNLVSSKFVPLTPIQLWTGHKPSLKHVRVWGCPAHVLKGKTEKLEPKTEVCVFI 93
Query: 186 GYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEEL 326
G PKGT+GG+FY+ +++KVIV+TNA FLE D++ N RSK++L+EL
Sbjct: 94 GCPKGTKGGMFYNPKEKKVIVTTNAKFLEKDFLANHIHRSKLVLQEL 140
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 142 bits (357), Expect = 4e-37
Identities = 67/111 (60%), Positives = 84/111 (75%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA++ILN VPSKS+ +TP ELW G K SL +FRIWGCPAHVL +KL PRS++ LF
Sbjct: 634 LETAIHILNNVPSKSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLF 693
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEELLSD 335
VGYPK +RGGLFY Q+ KV VSTNA FLE D+ N RSK++L+E+ +
Sbjct: 694 VGYPKESRGGLFYHPQENKVFVSTNATFLEEDHXRNHQPRSKIVLKEMFKN 744
>ref|XP_010099335.1| hypothetical protein L484_000113 [Morus notabilis]
gi|587889088|gb|EXB77770.1| hypothetical protein
L484_000113 [Morus notabilis]
Length = 294
Score = 134 bits (337), Expect = 1e-36
Identities = 64/108 (59%), Positives = 78/108 (72%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+ YILN VPSK++ TP E W+G K SL H RIWGCP HVL+ KT KL RSE+ LF
Sbjct: 16 LEIVAYILNQVPSKAVPGTPYERWSGKKSSLGHTRIWGCPTHVLRKKTGKLASRSELCLF 75
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEEL 326
VGYPKGT+G +FY QK VSTNA FLE D+++N RS+++LEEL
Sbjct: 76 VGYPKGTKGYIFYSPTDQKTFVSTNAHFLEEDFVKNMKPRSRLVLEEL 123
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 140 bits (353), Expect = 1e-36
Identities = 65/111 (58%), Positives = 81/111 (72%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
++TA YILN+VPSKS+ KTP ELW G K SL H R+WGCP HVLKGKT KL + E F
Sbjct: 574 IETAAYILNLVPSKSVFKTPTELWTGRKPSLKHVRMWGCPTHVLKGKTDKLETKIEFCFF 633
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEELLSD 335
+GYP+GT+G LFY + +K+IVSTNA +LE DYI N +S++ L EL D
Sbjct: 634 IGYPRGTKGSLFYSPKDKKIIVSTNAHYLEEDYIRNHIPKSQLALNELRGD 684
>ref|XP_010087941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis] gi|587840228|gb|EXB30863.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Morus notabilis]
Length = 403
Score = 122 bits (307), Expect = 3e-31
Identities = 57/80 (71%), Positives = 63/80 (78%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA YILN VPSKSI KTPLELW G K SL H RIWGCPAHVLKGKT KL P+SEV +F
Sbjct: 216 LRTAAYILNRVPSKSIPKTPLELWCGQKPSLRHVRIWGCPAHVLKGKTEKLEPKSEVCMF 275
Query: 183 VGYPKGTRGGLFYDLQQQKV 242
VGYP GT+G FY + QK+
Sbjct: 276 VGYPDGTKGDFFYSPEDQKI 295
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 124 bits (312), Expect = 5e-31
Identities = 67/111 (60%), Positives = 72/111 (64%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
LQT VYILN+VPSKSI TPLELWNG K SL H RIWGCPAHVLKGKT KL RSEV +F
Sbjct: 439 LQTVVYILNMVPSKSIPNTPLELWNGRKPSLRHIRIWGCPAHVLKGKTGKLESRSEVCMF 498
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEELLSD 335
VGYPKGTRG +F RSKV+LEELL+D
Sbjct: 499 VGYPKGTRG--------------------------DFKPRSKVVLEELLAD 523
>ref|XP_009803853.1| PREDICTED: uncharacterized protein LOC104249176 [Nicotiana
sylvestris]
Length = 220
Score = 110 bits (275), Expect = 4e-28
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+ YILN+VPSKS+ TP+ELW G K SL H R+WGCP HVLKGK KL R+EV LF
Sbjct: 20 LEKTNYILNLVPSKSVPSTPVELWTGHKPSLQHIRVWGCPTHVLKGKVDKLESRTEVCLF 79
Query: 183 VGYPKGTRGGLFYDLQQQKV 242
+G PKGT+GGLFY ++K+
Sbjct: 80 IGCPKGTKGGLFYCPNEKKI 99
>ref|XP_009602612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC104097704 [Nicotiana tomentosiformis]
Length = 445
Score = 110 bits (276), Expect = 1e-26
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+T YILN+VPSKS+ TPLELW G K SL H R+W P HVLKGKT KL R+EV +F
Sbjct: 335 LETTNYILNLVPSKSVPSTPLELWTGRKPSLRHIRVWDYPTHVLKGKTYKLESRTEVCIF 394
Query: 183 VGYPKGTRGGLFYDLQQQK 239
+GYPKGT+GGLFY +++K
Sbjct: 395 IGYPKGTKGGLFYCPKEKK 413
>ref|XP_010108259.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis] gi|587931412|gb|EXC18499.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Morus notabilis]
Length = 414
Score = 107 bits (268), Expect = 1e-25
Identities = 52/72 (72%), Positives = 60/72 (83%)
Frame = +3
Query: 120 PAHVLKGKTRKLHPRSEVYLFVGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*S 299
PAHVL+ KT KL PRSEVY+FVGYP+GTRGGLFY QKV VSTNA FLE+DY+ +F
Sbjct: 155 PAHVLRQKTGKLEPRSEVYIFVGYPQGTRGGLFYSQADQKVFVSTNATFLEHDYMIDFKP 214
Query: 300 RSKVILEELLSD 335
RSK++LEELLSD
Sbjct: 215 RSKIVLEELLSD 226
>ref|XP_009798005.1| PREDICTED: uncharacterized protein LOC104244304 [Nicotiana
sylvestris]
Length = 165
Score = 102 bits (254), Expect = 2e-25
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+ A YILN+VPSKS+ TP+ELW SK SL H R W CP HVLKGK KL R+EV +F
Sbjct: 20 LEIANYILNLVPSKSVPSTPIELWTRSKPSLQHIRGWSCPTHVLKGKADKLESRTEVCIF 79
Query: 183 VGYPKGTRGGLFYDLQQQK 239
+GYPK T+G LFY +++K
Sbjct: 80 IGYPKVTKGSLFYYPKEKK 98
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 106 bits (264), Expect = 1e-24
Identities = 50/108 (46%), Positives = 73/108 (67%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA + LN VPSKS+ KTP E+W G + SL+ +IWGC +V + ++ KL P+S+ Y F
Sbjct: 300 LETAAFTLNRVPSKSLDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKYFF 359
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILEEL 326
VGYPK T+G FY+ ++ KV V+ + +FLE ++I S V LEE+
Sbjct: 360 VGYPKETKGYYFYNREEDKVFVARHDVFLEKEFISTKDSGIMVRLEEI 407
>ref|XP_008650298.1| PREDICTED: uncharacterized protein LOC103631070, partial [Zea mays]
Length = 348
Score = 103 bits (256), Expect = 3e-24
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA + LN VPSKS+ KTP E+W G SL+ +IWGC +V + ++ KL P+S+ +F
Sbjct: 243 LETAAFTLNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMF 302
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILE 320
VGYPK T G FY + KV V+ N +FLE ++++ S+ KV LE
Sbjct: 303 VGYPKETLGYYFYHRSEGKVFVARNGVFLEKEFLKREKSKQKVYLE 348
>ref|XP_008650161.1| PREDICTED: uncharacterized protein LOC103630903, partial [Zea mays]
Length = 353
Score = 103 bits (256), Expect = 3e-24
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA + LN VPSKS+ KTP E+W G SL+ +IWGC +V + ++ KL P+S+ +F
Sbjct: 248 LETAAFTLNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMF 307
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILE 320
VGYPK T G FY + KV V+ N +FLE ++++ S+ KV LE
Sbjct: 308 VGYPKETLGYYFYHRSEGKVFVARNGVFLEKEFLKREKSKQKVYLE 353
>ref|XP_008650230.1| PREDICTED: uncharacterized protein LOC103630987, partial [Zea mays]
Length = 354
Score = 103 bits (256), Expect = 3e-24
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA + LN VPSKS+ KTP E+W G SL+ +IWGC +V + ++ KL P+S+ +F
Sbjct: 249 LETAAFTLNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMF 308
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILE 320
VGYPK T G FY + KV V+ N +FLE ++++ S+ KV LE
Sbjct: 309 VGYPKETLGYYFYHRSEGKVFVARNGVFLEKEFLKREKSKQKVYLE 354
>ref|XP_008650258.1| PREDICTED: uncharacterized protein LOC103631015, partial [Zea mays]
Length = 364
Score = 103 bits (256), Expect = 4e-24
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA + LN VPSKS+ KTP E+W G SL+ +IWGC +V + ++ KL P+S+ +F
Sbjct: 259 LETAAFTLNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMF 318
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILE 320
VGYPK T G FY + KV V+ N +FLE ++++ S+ KV LE
Sbjct: 319 VGYPKETLGYYFYHRSEGKVFVARNGVFLEKEFLKREKSKQKVYLE 364
>ref|XP_008650257.1| PREDICTED: uncharacterized protein LOC103631014, partial [Zea mays]
Length = 364
Score = 103 bits (256), Expect = 4e-24
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = +3
Query: 3 LQTAVYILNVVPSKSIQKTPLELWNGSKVSLNHFRIWGCPAHVLKGKTRKLHPRSEVYLF 182
L+TA + LN VPSKS+ KTP E+W G SL+ +IWGC +V + ++ KL P+S+ +F
Sbjct: 259 LETAAFTLNRVPSKSVVKTPYEMWTGKTPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCMF 318
Query: 183 VGYPKGTRGGLFYDLQQQKVIVSTNAIFLENDYIENF*SRSKVILE 320
VGYPK T G FY + KV V+ N +FLE ++++ S+ KV LE
Sbjct: 319 VGYPKETLGYYFYHRSEGKVFVARNGVFLEKEFLKREKSKQKVYLE 364