BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00048146
         (612 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007036990.1| Retrotransposon protein, putative [Theobroma...    47   2e-06

>ref|XP_007036990.1| Retrotransposon protein, putative [Theobroma cacao]
            gi|508774235|gb|EOY21491.1| Retrotransposon protein,
            putative [Theobroma cacao]
          Length = 1145

 Score = 47.0 bits (110), Expect(2) = 2e-06
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = +1

Query: 247  KSYVNKMRTPLEFQVGNQVLMKVSPRKGVHCFGKK 351
            KSYV+  R  LEFQVG+ V +KVSP KG+  FGKK
Sbjct: 992  KSYVDNRRRDLEFQVGDHVFLKVSPTKGIMRFGKK 1026



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 344  ERRKLSPQNI*PYEIL*RVVRLTYDLWLRXXXXXXXXXXXXXXVK*ICTLTNRHTIW-ES 520
            ++ KLSPQ I P+EIL RV  + Y L L               ++        H IW E+
Sbjct: 1025 KKGKLSPQYIGPFEILERVGAVAYRLALPPDLSNIHPVFHVSILR-KYNSDPSHVIWYET 1083

Query: 521  *LICEDLSYDEQFV*ILNRK 580
              +  DL+Y++Q V IL+R+
Sbjct: 1084 IQLNNDLTYEKQPVAILDRQ 1103