BLASTX nr result

ID: Rehmannia28_contig00048099 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00048099
         (394 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN18573.1| hypothetical protein AMTR_s00065p00126320 [Ambore...    91   6e-21
gb|KUM49827.1| hypothetical protein ABT39_MTgene3054 (mitochondr...    59   4e-09
gb|KVH89091.1| NADH:ubiquinone oxidoreductase, subunit 1/F420H2 ...    58   6e-08
ref|XP_006290089.1| hypothetical protein CARUB_v10003734mg [Caps...    53   2e-06

>gb|ERN18573.1| hypothetical protein AMTR_s00065p00126320 [Amborella trichopoda]
          Length = 159

 Score = 91.3 bits (225), Expect = 6e-21
 Identities = 51/80 (63%), Positives = 56/80 (70%)
 Frame = +2

Query: 92  LTPPFELVHSLGDPLLSRSSVCSSFRPVSEISAHCSHLRGSSHLDSTRTLVPRPLSR*SC 271
           L P  ELVHSLGDPLLSRSSV SSFRPVS ISAHCSHL+ S HLDST+TLVPR     +C
Sbjct: 42  LPPSLELVHSLGDPLLSRSSVFSSFRPVSGISAHCSHLQASLHLDSTKTLVPRT----AC 97

Query: 272 PPYDPQLKMSLATRRGHSPC 331
                 LK +L T   + PC
Sbjct: 98  ------LKPALGTTTPNEPC 111



 Score = 80.9 bits (198), Expect = 7e-17
 Identities = 61/133 (45%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
 Frame = +1

Query: 22  GLVSYSRSSDKIRTTTSLKAWFLPHSPL*ARPFVG*SLALTFECLLVV*ARE*DFCSLQS 201
           GLVSYS SS K RT TSLKAWFLP S           L L       + +R   F S + 
Sbjct: 21  GLVSYSCSSYK-RTATSLKAWFLPPS-----------LELVHSLGDPLLSRSSVFSSFRP 68

Query: 202 PPGFFAPG*YQDPC---------APALEPIKLPAL*PTTQNEPCDETRTFPMLRFPPVRS 354
             G  A   +              P    +K PAL  TT NEPCD+ +TFPMLRFP V S
Sbjct: 69  VSGISAHCSHLQASLHLDSTKTLVPRTACLK-PALGTTTPNEPCDKMQTFPMLRFPLVHS 127

Query: 355 RVGLGEQPSDCLR 393
           +VGLGE PSDCLR
Sbjct: 128 QVGLGEHPSDCLR 140


>gb|KUM49827.1| hypothetical protein ABT39_MTgene3054 (mitochondrion) [Picea
           glauca]
          Length = 90

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 394 REGNRSAVPLTQPGNGPEGSAAWGMSASRRKAHFEL 287
           R G RS V LT+PGNGPEG+AAW MSASRRKA+FEL
Sbjct: 51  RYGTRSDVTLTRPGNGPEGTAAWVMSASRRKANFEL 86


>gb|KVH89091.1| NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase
           subunit H [Cynara cardunculus var. scolymus]
          Length = 192

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = -1

Query: 394 REGNRSAVPLTQPGNGPEGSAAWGMSASRRKAHFE 290
           REGNRS VPLTQPGNGP  +A  GMSASR KAHFE
Sbjct: 76  REGNRSDVPLTQPGNGPGRTATLGMSASRPKAHFE 110


>ref|XP_006290089.1| hypothetical protein CARUB_v10003734mg [Capsella rubella]
           gi|482558795|gb|EOA22987.1| hypothetical protein
           CARUB_v10003734mg [Capsella rubella]
          Length = 142

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -1

Query: 247 GHKGPGTIQVRRTPEVTAMSRNLTHGPKRRANT 149
           G+ GPGT+QVRRT EVT MSRNLTH PKR  NT
Sbjct: 68  GNTGPGTLQVRRTLEVTTMSRNLTHRPKRCENT 100


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