BLASTX nr result

ID: Rehmannia28_contig00047970 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00047970
         (352 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011084728.1| PREDICTED: WD repeat-containing protein RUP2...    64   8e-10
ref|XP_011076489.1| PREDICTED: WD repeat-containing protein RUP2...    62   4e-09

>ref|XP_011084728.1| PREDICTED: WD repeat-containing protein RUP2-like [Sesamum indicum]
          Length = 392

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 32/63 (50%), Positives = 43/63 (68%)
 Frame = +2

Query: 164 MKNFSSHFPLQNPQHPNTPLAIPNTIQGQEKDENEPPPSDIEDQQDKPRCDWDFNLTTVI 343
           M+NFSSHF LQ P        IP TI+G++ +E E P + ++DQ   PRC+WDFNL+ VI
Sbjct: 1   MRNFSSHFRLQQPGS-----VIPYTIRGRQNEEGEQPRAAVDDQ---PRCEWDFNLSAVI 52

Query: 344 SSS 352
           SS+
Sbjct: 53  SSA 55


>ref|XP_011076489.1| PREDICTED: WD repeat-containing protein RUP2-like [Sesamum indicum]
          Length = 386

 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 33/63 (52%), Positives = 39/63 (61%)
 Frame = +2

Query: 164 MKNFSSHFPLQNPQHPNTPLAIPNTIQGQEKDENEPPPSDIEDQQDKPRCDWDFNLTTVI 343
           MKNFSSH PLQNPQ   TPL       G+EK+E++           K RC+WDFNL+ VI
Sbjct: 1   MKNFSSHSPLQNPQPSTTPLNPETGRGGEEKEEDQ-----------KARCEWDFNLSAVI 49

Query: 344 SSS 352
           SSS
Sbjct: 50  SSS 52


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