BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00047900
         (360 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009778683.1| PREDICTED: uncharacterized protein LOC104227...    62   3e-09
ref|XP_011071708.1| PREDICTED: uncharacterized protein LOC105157...    61   1e-08
ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976...    61   1e-08
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    61   1e-08
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    60   2e-08
ref|XP_010678293.1| PREDICTED: uncharacterized protein LOC104893...    60   4e-08
ref|XP_008661060.1| PREDICTED: uncharacterized protein LOC103640...    58   1e-07
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...    58   2e-07
ref|XP_010496488.1| PREDICTED: uncharacterized protein LOC104773...    57   3e-07
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]    57   3e-07
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    56   7e-07
gb|KYP49743.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-06
gb|KYP33262.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-06
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]    55   1e-06
ref|XP_004514759.1| PREDICTED: uncharacterized protein LOC101514...    54   2e-06
ref|XP_015163902.1| PREDICTED: uncharacterized protein LOC107060...    54   6e-06
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]    54   6e-06
ref|XP_010518614.1| PREDICTED: uncharacterized protein LOC104793...    53   8e-06

>ref|XP_009778683.1| PREDICTED: uncharacterized protein LOC104227996 [Nicotiana
           sylvestris]
          Length = 241

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSIL---PPVEHT------------- 134
           G+   QKGY LLD+ + Q  V+R V F E+VFPF   L   PP+  +             
Sbjct: 88  GFSDTQKGYILLDISTHQFFVNRDVVFQENVFPFKDYLKVSPPIFTSFPSPPSCEEVYRV 147

Query: 135 --PLPAIHPHIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYTPLQGPS 308
             P P I+P   +D S            LRRS  T  PP +L+DFVT      TP    +
Sbjct: 148 VCPSPHINPSTSSDGSEPLSITPEPCPTLRRSLRTKHPPLWLKDFVTQPSTTTTPYSIAN 207

Query: 309 PTSLPQTYPY 338
             S     PY
Sbjct: 208 YVSYDSLSPY 217


>ref|XP_011071708.1| PREDICTED: uncharacterized protein LOC105157106 [Sesamum indicum]
          Length = 577

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 41/102 (40%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSILPPVEHTPLPAIHPHIDTDYSIX 182
           GY PGQK YRLLDL+S  I VSR++ F E VFPF      V   PL AI    DTD  + 
Sbjct: 434 GYPPGQKAYRLLDLDSNTIFVSRNITFHEDVFPFAQSPSTVPAVPLAAIPLDADTDTVVP 493

Query: 183 XXXXXXXXXV--------------LRRSSTTTRPPAYLQDFV 266
                                   +RRS  T   PA+L DFV
Sbjct: 494 SPHLPPTTSASSPTSDIASPSFVPVRRSQRTHTKPAWLSDFV 535


>ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata]
          Length = 944

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 45/134 (33%), Positives = 59/134 (44%), Gaps = 23/134 (17%)
 Frame = +3

Query: 3    GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPF------------------HSILPPVE 128
            GY  G KGY+LLDL S ++ +SR V F E+++PF                   S++P   
Sbjct: 785  GYPSGIKGYKLLDLVSHKVFISRDVIFHENIYPFTNKSSSSEFISTDFSPLPPSVIPSFH 844

Query: 129  H----TPLPAIHPHIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYTPL 296
            H     P P++   +    S            LR+SS   +PP YL DF  NAV   TPL
Sbjct: 845  HDSISEPYPSVSVSVPPISSPSNMPVVQPIVPLRKSSRHIKPPTYLSDFKCNAVTTSTPL 904

Query: 297  QGPSP-TSLPQTYP 335
               S  T L Q  P
Sbjct: 905  YPISKFTDLSQLSP 918


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
 Frame = +3

Query: 3    GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSILPPVEHTPLPAIHPHIDTDYS-- 176
            GY  G KGY+LLDLES  I +SR+V F E +FPF +   P E+       PHI  D +  
Sbjct: 784  GYPSGYKGYKLLDLESHTIFISRNVVFYEDLFPFKT--KPAENEESSVFFPHIYVDRNDS 841

Query: 177  ------IXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYT 290
                               +++S  +RPPAYL+D+  N+V + T
Sbjct: 842  HPSQPLPVQETSASNVPAEKQNSRVSRPPAYLKDYHCNSVTSST 885


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3    GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPF--HSILPPVEHTPLPAIHPHIDTDYS 176
            GY  G KGY+LLDLE+  I +SRHV F E VFPF   +I+P      +  +H +I+   S
Sbjct: 836  GYPSGYKGYKLLDLETNTIHISRHVVFYETVFPFTDKTIIPRDVFDLVDPVHENIENPPS 895

Query: 177  IXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAV 278
                           S   +RPP YLQD+  NAV
Sbjct: 896  TSESAPKV------SSKRESRPPGYLQDYFCNAV 923


>ref|XP_010678293.1| PREDICTED: uncharacterized protein LOC104893861 [Beta vulgaris
           subsp. vulgaris]
          Length = 683

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHS-------------ILPPVEHTPLP 143
           GY P  KGY+LL LE+ Q+ +SR V F EH+FP+H              ++PP E  P  
Sbjct: 457 GYPPHTKGYKLLHLETKQVFISRDVVFYEHIFPYHKKSLTHLMNPIPAPLIPPNE--PTY 514

Query: 144 AIHPHIDTDY----------------------SIXXXXXXXXXXVLRRSSTTTRPPAYLQ 257
            IHP ++T                         +           +R+S+  TRPP +LQ
Sbjct: 515 IIHPDLETSSHENTNEPVDPISSPTTPKSPTPPVSPPTNAPQPTTVRKSTRDTRPPTWLQ 574

Query: 258 DFVTNAVVAYTPLQGPSPTSLPQT 329
           D+       +TP      TSLPQ+
Sbjct: 575 DY-------HTP-----HTSLPQS 586


>ref|XP_008661060.1| PREDICTED: uncharacterized protein LOC103640203 [Zea mays]
          Length = 475

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 37/113 (32%), Positives = 51/113 (45%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSILPPVEHTPLPAIHPHIDTDYSIX 182
           GY P  KGYR LDL + +I++SRHV F E VFP     PP +   L      +++D S  
Sbjct: 29  GYSPDHKGYRCLDLTTHRIIISRHVVFDEDVFPLTGSSPPTDLGSL------LESDSSTH 82

Query: 183 XXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYTPLQGPSPTSLPQTYPYT 341
                    +    +T + PP       +   +  TP   PSPT +P   P T
Sbjct: 83  PSQAPRLALLPAPRATPSTPPVPHAASTSLLALLPTPRTAPSPTHVPHAAPST 135


>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPF--HSILPP-----------VEHTPLP 143
           GY P  KGY LLD+E+  I VSR+V F E +FPF  HS+  P           +  +P+ 
Sbjct: 32  GYKPHVKGYILLDIETRAIFVSRNVTFHETIFPFLQHSLNNPTTPVGLLASDTIYDSPIS 91

Query: 144 AIHPHIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYTPLQGPSPTSLP 323
              P   TD S              R     RPP+YLQD        Y   Q P+ T+ P
Sbjct: 92  PPQPS-STDQSSSTSHPPTQPSTSSRPQRNRRPPSYLQD--------YQHYQLPAATNHP 142

Query: 324 QTYPYTISSCFS 359
            T P++I +C S
Sbjct: 143 GT-PHSIFNCIS 153


>ref|XP_010496488.1| PREDICTED: uncharacterized protein LOC104773550 [Camelina sativa]
          Length = 747

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSILPPVEHTPLPAIHPHI 161
           GY    +GYR LD+ S +IL+SRHV FVE+VFPF  + PP    P+P + P I
Sbjct: 674 GYPANHRGYRCLDIASRKILLSRHVVFVENVFPFSQLPPPNTPKPVPLLPPPI 726


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPF----------HSILPPVEHTPL---P 143
           GY  G+KG++L DL++ ++ VSR V+F E VFPF           +I+P     PL   P
Sbjct: 517 GYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAVNIIPENIVPTASSAPLSPGP 576

Query: 144 AIHPHIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYTPLQGPSPTSLP 323
            + P +  D              + +      P   L+DFVT+ VVA +P         P
Sbjct: 577 EVVPTVGLDSLGLDNSSNGQSAPMGKGMRDKFPSVLLRDFVTHTVVAESPSPATPXPQHP 636

Query: 324 QTYPYTIS 347
              PY I+
Sbjct: 637 SGTPYPIA 644


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
 Frame = +3

Query: 3    GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPF-HSILPPVEHTPLPAIHP-------- 155
            GY  G KGY+LLDLE+  I+VSRHV F E +FPF  S L   E    P ++P        
Sbjct: 657  GYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQS 716

Query: 156  --HI---DTDYSIXXXXXXXXXXVLRRSSTTT-----RPPAYLQDFVTNAVVAYTP 293
              H+   D+  S+           +   S  T     + PAYLQD+  ++VV+ TP
Sbjct: 717  SDHVNPSDSSSSVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTP 772


>gb|KYP49743.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 323

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 26/47 (55%), Positives = 29/47 (61%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSILPPVEHTPLP 143
           GY PG KGY L D+E+ Q  VSR V F E +FPF  I PP    PLP
Sbjct: 157 GYKPGTKGYLLFDIETKQFFVSRDVYFYEKIFPFTDIQPPDPSNPLP 203


>gb|KYP33262.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 743

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 26/47 (55%), Positives = 29/47 (61%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSILPPVEHTPLP 143
           GY PG KGY L D+E+ Q  VSR V F E +FPF  I PP    PLP
Sbjct: 648 GYKPGTKGYLLFDIETKQFFVSRDVYFYEKIFPFTDIQPPDPSNPLP 694


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 37/108 (34%), Positives = 53/108 (49%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSILPPVEHTPLPAIHPHIDTDYSIX 182
           GY  GQK Y+L DL++ Q+  SR V F E +FP+ SI  P  ++    +  H+ +     
Sbjct: 501 GYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNSDPFLLSHHLAS----- 555

Query: 183 XXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYTPLQGPSPTSLPQ 326
                    +LRRS     PP  L+D+V N V   +P   P  +S PQ
Sbjct: 556 ----PPPEPILRRSQRPHHPPMALRDYVCNQVT--SPNHLPPLSSSPQ 597


>ref|XP_004514759.1| PREDICTED: uncharacterized protein LOC101514665 [Cicer arietinum]
          Length = 270

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 41/136 (30%), Positives = 53/136 (38%), Gaps = 26/136 (19%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSI----------------------- 113
           G+  G KGY L DL +  I  SR+V F EH+FP+ SI                       
Sbjct: 12  GFKLGTKGYVLFDLNTRDIFTSRNVIFYEHIFPYPSIDSINVHCIPNDVTDFTTLLFDDP 71

Query: 114 ---LPPVEHTPLPAIHPHIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVA 284
              +  + H      + H D    I           LRRSS   + PAYLQDF  N VV 
Sbjct: 72  IYIVDDIGHVSNILPNSHFDNHTFIITDSTNSPAPTLRRSSRPRQKPAYLQDFQCNIVVV 131

Query: 285 YTPLQGPSPTSLPQTY 332
            +  +   P S   +Y
Sbjct: 132 DSSFKALYPISSILSY 147


>ref|XP_015163902.1| PREDICTED: uncharacterized protein LOC107060458 [Solanum tuberosum]
          Length = 871

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFHSI------LPPVEHT---PLPAIHP 155
           GY   QKGYRL DLE+    +SR V F+E VFPF         +PP + T   P   +  
Sbjct: 667 GYGTTQKGYRLYDLENKSFFISRDVVFMEDVFPFKDTVTDQQHIPPSQSTRIVPEEIVQL 726

Query: 156 HIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNA 275
            +D   +            +R+S+   RPP + +D+VT A
Sbjct: 727 QVDEVATSVAPVDVIPATPVRKSTRGVRPPIWHKDYVTKA 766


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
 Frame = +3

Query: 3   GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPFH-----SILPP-------VEHT---- 134
           GY  G+KG++L DL++ ++ VSR V+F E VFPF      +I+P        V HT    
Sbjct: 461 GYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAVNIIPDNIVPMGGVAHTEASS 520

Query: 135 ----PLPAIHPHIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDFVTNAVVAYTPLQG 302
               P P + P +  D              + +      P   L+DFVT+ VVA +P   
Sbjct: 521 ATLSPGPEVVPTVGLDSLGLDNTSNGQSAPMGKGMRDKFPSVLLRDFVTHTVVAESPSPA 580

Query: 303 PSPTSLPQTYPYTIS 347
                 P   PY I+
Sbjct: 581 TPSPQHPSGTPYPIA 595


>ref|XP_010518614.1| PREDICTED: uncharacterized protein LOC104793888 [Camelina sativa]
          Length = 839

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
 Frame = +3

Query: 3    GYIPGQKGYRLLDLESLQILVSRHVQFVEHVFPF--------------HSILP-PVEHTP 137
            GY  G KGY+LLD+E+  + +SRHV F E +FPF              H  LP  +   P
Sbjct: 606  GYSLGYKGYKLLDIETYSVSISRHVIFYEDIFPFASSTISDDAKTFFPHITLPAQITDDP 665

Query: 138  LPAIHPHIDTDYSIXXXXXXXXXXVLRRSSTTTRPPAYLQDF---VTNAVVAYTPLQGPS 308
            LP +    D  +               + +   + P++LQDF     N +  +TP Q  S
Sbjct: 666  LPRVQSSSDAPHHHDETSSMVSVPFELKPTRQRKLPSHLQDFHCYNNNTLTIHTP-QKTS 724

Query: 309  PTSLPQTYPYTISS 350
            P  L     Y+  S
Sbjct: 725  PYPLENYISYSYLS 738