BLASTX nr result
ID: Rehmannia28_contig00047781
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00047781
(308 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011082878.1| PREDICTED: pentatricopeptide repeat-containi... 146 4e-40
ref|XP_012846974.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-35
emb|CDP06080.1| unnamed protein product [Coffea canephora] 108 3e-26
gb|EPS67170.1| hypothetical protein M569_07606 [Genlisea aurea] 97 1e-21
ref|XP_009625869.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-19
ref|XP_009783781.1| PREDICTED: pentatricopeptide repeat-containi... 87 5e-18
gb|KVI02130.1| Pentatricopeptide repeat-containing protein [Cyna... 85 2e-17
ref|XP_009625872.1| PREDICTED: pentatricopeptide repeat-containi... 82 2e-16
ref|XP_009783790.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-16
ref|XP_011045591.1| PREDICTED: pentatricopeptide repeat-containi... 82 3e-16
gb|KJB45856.1| hypothetical protein B456_007G3334001, partial [G... 75 1e-15
ref|XP_015089471.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-15
ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-15
ref|XP_010694554.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-15
ref|XP_002521673.2| PREDICTED: pentatricopeptide repeat-containi... 78 8e-15
ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-14
gb|KDO49351.1| hypothetical protein CISIN_1g015590mg [Citrus sin... 77 2e-14
ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citr... 77 2e-14
ref|XP_012466150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 75 2e-14
ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-14
>ref|XP_011082878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Sesamum indicum]
Length = 440
Score = 146 bits (368), Expect = 4e-40
Identities = 73/102 (71%), Positives = 86/102 (84%)
Frame = +1
Query: 1 SQFPLLSSILLARLNFALTFHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIF 180
SQFPLLSSIL ARLNF+L FH+FAPSKP S +N N + P+LL +KDWLS PE IRIF
Sbjct: 54 SQFPLLSSILFARLNFSLHFHRFAPSKP----SHDNGNGHYPDLLSYKDWLSPPEAIRIF 109
Query: 181 QNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
Q+LK+P+ LPLF QLSSRKDY+PNESLYAT+INKLALA++F
Sbjct: 110 QHLKDPDLTLPLFAQLSSRKDYRPNESLYATLINKLALARNF 151
>ref|XP_012846974.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Erythranthe guttata]
Length = 388
Score = 133 bits (334), Expect = 2e-35
Identities = 63/93 (67%), Positives = 79/93 (84%)
Frame = +1
Query: 28 LLARLNFALTFHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFA 207
LLAR+NF+L FH +A SK + ++D ++CP+LL HKDWLSQP+VIRIFQNLKNPNF
Sbjct: 17 LLARVNFSLHFHHYASSKSNDD---DDDRRSCPDLLSHKDWLSQPQVIRIFQNLKNPNFT 73
Query: 208 LPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
L LF QL++RKDY+PNESLY+T+INKLALAK+F
Sbjct: 74 LSLFEQLTARKDYRPNESLYSTLINKLALAKNF 106
>emb|CDP06080.1| unnamed protein product [Coffea canephora]
Length = 403
Score = 108 bits (271), Expect = 3e-26
Identities = 54/93 (58%), Positives = 66/93 (70%)
Frame = +1
Query: 28 LLARLNFALTFHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFA 207
LL R NF + H F+PS+ + PNL +HKDWLS E I+IFQ+LK+PNF
Sbjct: 27 LLQRSNFLTSSHPFSPSQ----------ESHIPNLANHKDWLSPNETIKIFQSLKDPNFT 76
Query: 208 LPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
LPLF Q+S RKDY PNE+LY+T+INKLALAKDF
Sbjct: 77 LPLFNQISQRKDYNPNEALYSTVINKLALAKDF 109
>gb|EPS67170.1| hypothetical protein M569_07606 [Genlisea aurea]
Length = 393
Score = 96.7 bits (239), Expect = 1e-21
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 LNFALTFHQFAP-SKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPL 216
+ FA FHQFAP +P +D LL++KDWLSQPEVIRIF+NLK+P+ ALPL
Sbjct: 17 IRFAFHFHQFAPRGEPRSIGVRRSD---LAELLNYKDWLSQPEVIRIFRNLKDPDLALPL 73
Query: 217 FVQLSSRKDYKPNESLYATIINKLALAKDF 306
QLS R+DY PNES+Y+ +++KLA A +F
Sbjct: 74 LYQLSLRRDYNPNESIYSVVVDKLACAGNF 103
>ref|XP_009625869.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Nicotiana tomentosiformis]
Length = 406
Score = 90.1 bits (222), Expect = 3e-19
Identities = 42/80 (52%), Positives = 59/80 (73%)
Frame = +1
Query: 67 FAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDY 246
F+PS+P +N ++ NL+++KDWLS EVI+IFQNLKNPN AL + Q+S RKDY
Sbjct: 34 FSPSRPFSSSQIQNSDEI--NLVNYKDWLSPNEVIKIFQNLKNPNSALTVLNQISKRKDY 91
Query: 247 KPNESLYATIINKLALAKDF 306
KPNE++Y ++ LA+AK+F
Sbjct: 92 KPNEAIYNVVVKNLAIAKNF 111
>ref|XP_009783781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Nicotiana sylvestris]
gi|698470305|ref|XP_009783782.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Nicotiana sylvestris]
gi|698470309|ref|XP_009783783.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Nicotiana sylvestris]
Length = 405
Score = 86.7 bits (213), Expect = 5e-18
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +1
Query: 67 FAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDY 246
F+PS+P S + N + NL+++KDWLS EVI+IFQNL +PN AL + Q+S RKDY
Sbjct: 34 FSPSRPFS--SSQIQNSDDINLVNYKDWLSPNEVIKIFQNLNDPNSALNVLNQISKRKDY 91
Query: 247 KPNESLYATIINKLALAKDF 306
KPNE++Y+ ++ LA+AK+F
Sbjct: 92 KPNEAIYSVVVKNLAMAKNF 111
>gb|KVI02130.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 383
Score = 85.1 bits (209), Expect = 2e-17
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +1
Query: 58 FHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSR 237
+H A KP P N LLDHKDWLS EV++IF+ LK+PN L + QLS R
Sbjct: 22 YHSAASIDSSTKPHPFN-------LLDHKDWLSPNEVVKIFETLKDPNSTLTVLNQLSKR 74
Query: 238 KDYKPNESLYATIINKLALAKDF 306
KDYKPNE+LYA++I+ L+ AK+F
Sbjct: 75 KDYKPNEALYASVIDNLSKAKNF 97
>ref|XP_009625872.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Nicotiana tomentosiformis]
Length = 395
Score = 82.4 bits (202), Expect = 2e-16
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +1
Query: 82 PHQKPSPENDNQNCP--NLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPN 255
PH P QN NL+ +KDWLS EVI+IFQNLK+PN AL L Q+S RKDYKPN
Sbjct: 25 PHSCPFSSFQIQNFDEVNLIHYKDWLSPNEVIKIFQNLKDPNSALNLLNQISKRKDYKPN 84
Query: 256 ESLYATIINKLALAKDF 306
E++Y+ ++ LA+ ++F
Sbjct: 85 EAIYSVVVKNLAMTRNF 101
>ref|XP_009783790.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Nicotiana sylvestris]
Length = 217
Score = 80.1 bits (196), Expect = 2e-16
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = +1
Query: 127 NLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
NL+++KDWLS EVI+IF+NL +PN AL L Q+S RKDYKPNE++Y+ ++ LA+AK+F
Sbjct: 35 NLVNYKDWLSPNEVIKIFRNLNDPNSALNLLNQISKRKDYKPNEAIYSVVVKNLAMAKNF 94
>ref|XP_011045591.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Populus euphratica]
Length = 411
Score = 81.6 bits (200), Expect = 3e-16
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Frame = +1
Query: 94 PSPENDNQNCPNL--LDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPNESLY 267
PS +QN + L HKDWLS EVI+IF+NLK+PN + ++ Q S RKDYKPNE+LY
Sbjct: 41 PSSSISSQNSDSTYKLTHKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALY 100
Query: 268 ATIINKLALAKDF 306
+INKLA AK+F
Sbjct: 101 TQVINKLAQAKNF 113
>gb|KJB45856.1| hypothetical protein B456_007G3334001, partial [Gossypium
raimondii]
Length = 127
Score = 75.5 bits (184), Expect = 1e-15
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +1
Query: 133 LDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
L HKDWLS E+++IF NLK+PN + + Q S+RKDYKP E L+ +INKLA A+DF
Sbjct: 59 LTHKDWLSPTEILKIFDNLKDPNSLISVLAQYSARKDYKPTEPLFTLLINKLAYAQDF 116
>ref|XP_015089471.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Solanum pennellii]
Length = 387
Score = 79.3 bits (194), Expect = 2e-15
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = +1
Query: 133 LDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
+ + DWLS EVI+IFQNLKNPN AL L Q+S+RKDY+PNE++Y+ ++ LA+AK+F
Sbjct: 36 IQNSDWLSSNEVIKIFQNLKNPNSALTLLNQISNRKDYRPNEAIYSVVVKNLAIAKNF 93
>ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Solanum lycopersicum]
Length = 387
Score = 79.3 bits (194), Expect = 2e-15
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = +1
Query: 133 LDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
+ + DWLS EVI+IFQNLKNPN AL L Q+S+RKDY+PNE++Y+ ++ LA+AK+F
Sbjct: 36 IQNSDWLSSNEVIKIFQNLKNPNSALTLLNQISNRKDYRPNEAIYSVVVKNLAIAKNF 93
>ref|XP_010694554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Beta vulgaris subsp. vulgaris]
gi|870845551|gb|KMS98255.1| hypothetical protein
BVRB_4g094040 [Beta vulgaris subsp. vulgaris]
Length = 404
Score = 78.6 bits (192), Expect = 4e-15
Identities = 50/103 (48%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 SQFPLLSSILLARLNFALTFHQFAPSKPHQKPS-PENDNQNCPNLLDHKDWLSQPEVIRI 177
SQ L +SIL A+ N LT Q+ S PS P + L HKDWLS EV++I
Sbjct: 10 SQTKLGTSILSAQFNQTLT-KQYTSSIQLNPPSLPLSHQTLTTQKLFHKDWLSPNEVVKI 68
Query: 178 FQNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
F L PN LP+ +S RKDYKPNE+LY IINKLA K+F
Sbjct: 69 FSTLP-PNSVLPMLDHISKRKDYKPNETLYTVIINKLAQVKNF 110
>ref|XP_002521673.2| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Ricinus communis]
Length = 412
Score = 77.8 bits (190), Expect = 8e-15
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +1
Query: 52 LTFHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLS 231
L F+ F+ + P SP + + L+HKDWLS EV+RIF+++K+PN ++ Q +
Sbjct: 38 LYFNSFS-ALPSSSLSPPDTHYK----LNHKDWLSTTEVMRIFESIKDPNSVFSVWDQYT 92
Query: 232 SRKDYKPNESLYATIINKLALAKDF 306
+RKDYKPNE+LY +INKLA AK+F
Sbjct: 93 NRKDYKPNEALYTLVINKLAQAKNF 117
>ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Citrus sinensis]
Length = 404
Score = 77.0 bits (188), Expect = 1e-14
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +1
Query: 55 TFHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSS 234
TF +PS HQ D+ + L+HKDWLS EV++IF NL++P + + Q S
Sbjct: 30 TFALASPSASHQ------DSDHHVYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSK 83
Query: 235 RKDYKPNESLYATIINKLALAKDF 306
RKDY PNE+LY IINKLA AK F
Sbjct: 84 RKDYNPNEALYTLIINKLAQAKSF 107
>gb|KDO49351.1| hypothetical protein CISIN_1g015590mg [Citrus sinensis]
Length = 404
Score = 76.6 bits (187), Expect = 2e-14
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +1
Query: 55 TFHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSS 234
TF +PS HQ D+ + L+HKDWLS EV++IF NL++P + + Q S
Sbjct: 30 TFALASPSASHQ------DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSK 83
Query: 235 RKDYKPNESLYATIINKLALAKDF 306
RKDY PNE+LY IINKLA AK F
Sbjct: 84 RKDYNPNEALYTLIINKLAQAKRF 107
>ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citrus clementina]
gi|557544547|gb|ESR55525.1| hypothetical protein
CICLE_v10020422mg [Citrus clementina]
Length = 404
Score = 76.6 bits (187), Expect = 2e-14
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +1
Query: 55 TFHQFAPSKPHQKPSPENDNQNCPNLLDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSS 234
TF +PS HQ D+ + L+HKDWLS EV++IF NL++P + + Q S
Sbjct: 30 TFALASPSASHQ------DSDHHAYKLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSK 83
Query: 235 RKDYKPNESLYATIINKLALAKDF 306
RKDY PNE+LY IINKLA AK F
Sbjct: 84 RKDYNPNEALYTLIINKLAQAKRF 107
>ref|XP_012466150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g14580, mitochondrial-like, partial
[Gossypium raimondii]
Length = 269
Score = 75.5 bits (184), Expect = 2e-14
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +1
Query: 133 LDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
L HKDWLS E+++IF NLK+PN + + Q S+RKDYKP E L+ +INKLA A+DF
Sbjct: 8 LTHKDWLSPTEILKIFDNLKDPNSLISVLAQYSARKDYKPTEPLFTLLINKLAYAQDF 65
>ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial [Solanum tuberosum]
Length = 387
Score = 76.3 bits (186), Expect = 3e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 133 LDHKDWLSQPEVIRIFQNLKNPNFALPLFVQLSSRKDYKPNESLYATIINKLALAKDF 306
+ + DWLS EVI+IFQNLKN N AL L Q+S+RKDY+PNE++Y+ ++ LA+AK+F
Sbjct: 36 IQNSDWLSSNEVIKIFQNLKNANSALTLLNQISNRKDYRPNEAIYSVVVKNLAIAKNF 93