BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00047524
         (589 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   208   5e-59
gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposo...   188   1e-57
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   199   7e-56
gb|KYP47921.1| Retrovirus-related Pol polyprotein from transposo...   182   2e-53
gb|KYP31489.1| Retrovirus-related Pol polyprotein from transposo...   181   2e-53
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]   191   6e-53
gb|KYP31487.1| Retrovirus-related Pol polyprotein from transposo...   181   6e-53
gb|KYP32605.1| Retrovirus-related Pol polyprotein from transposo...   176   1e-52
gb|KYP75950.1| Retrovirus-related Pol polyprotein from transposo...   176   7e-52
gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposo...   182   3e-50
gb|KYP44478.1| Retrovirus-related Pol polyprotein from transposo...   178   1e-49
gb|KYP61012.1| Retrovirus-related Pol polyprotein from transposo...   171   6e-49
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   177   6e-48
gb|KYP72181.1| Retrovirus-related Pol polyprotein from transposo...   168   8e-48
gb|KYP75926.1| Copia protein, partial [Cajanus cajan]                 166   8e-48
gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposo...   176   1e-47
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   174   2e-47
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo...   175   2e-47
gb|KYP63768.1| Retrovirus-related Pol polyprotein from transposo...   173   2e-47
gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposo...   171   2e-47

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  208 bits (530), Expect = 5e-59
 Identities = 91/160 (56%), Positives = 118/160 (73%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           F +WH RLGHP++ IV  VL +           + IC  CC+GK HK  F  S+++YT P
Sbjct: 504 FTLWHNRLGHPSSHIVSLVLNK-CNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYTKP 562

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           L+LIH+DLWGP+   S++G++YYIHFID +SR TWIY+L+HKSEA   F+ FK+ +ELQL
Sbjct: 563 LELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQL 622

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
           GHKIKA+Q+DWGGEYRSFT YL ++GI H+  CPY HEQN
Sbjct: 623 GHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQN 662


>gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 201

 Score =  188 bits (478), Expect = 1e-57
 Identities = 87/161 (54%), Positives = 113/161 (70%)
 Frame = +3

Query: 105 SFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTA 284
           SF +WH RLGHP+  IV  VL ++          +F CQ CC+GK+H+ PF  S T YT+
Sbjct: 35  SFQLWHSRLGHPSPRIVNTVL-KSCNMPIAKNSDSFFCQSCCMGKSHQLPFIDSKTVYTS 93

Query: 285 PLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQ 464
           PL+LI+SD+WGPSP+ +TNG RYYI F+D +S++TWIYLL+ KS+A  AFI FK+H ELQ
Sbjct: 94  PLELIYSDIWGPSPIPATNGARYYIVFLDAYSKYTWIYLLQFKSQAFDAFIQFKSHAELQ 153

Query: 465 LGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
            G K+KAIQ+D   EY  FT+YL   GI H+   P+ HEQN
Sbjct: 154 FGSKLKAIQSDNANEYLKFTSYLTEKGIQHRLTFPHTHEQN 194


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  199 bits (507), Expect = 7e-56
 Identities = 88/161 (54%), Positives = 116/161 (72%)
 Frame = +3

Query: 105 SFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTA 284
           +FD+WHKRLGHP+ + ++ VL++           NF C  CCLGK H+FPF  S T YT 
Sbjct: 520 TFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNF-CSSCCLGKIHRFPFSLSHTTYTK 578

Query: 285 PLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQ 464
           PL+LIH DLWGP+ V S +GYRYYIHF+D FSR +WI+LLR+KSEA+  F+ FK  +ELQ
Sbjct: 579 PLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQ 638

Query: 465 LGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
              KIK++QTDWGGE+R+F +YL  +GI H+  CP+  +QN
Sbjct: 639 FDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQN 679


>gb|KYP47921.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 330

 Score =  182 bits (461), Expect = 2e-53
 Identities = 80/125 (64%), Positives = 98/125 (78%)
 Frame = +3

Query: 213 ICQPCCLGKAHKFPFPQSSTNYTAPLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTW 392
           +C+ CC GK H+  F  S+T +TAPLQ+I+SDLWGPSP+ S+NG  YY++FID +S++TW
Sbjct: 16  VCKACCYGKIHRLSFSSSTTTFTAPLQMIYSDLWGPSPIPSSNGSMYYMNFIDAYSKYTW 75

Query: 393 IYLLRHKSEALTAFITFKNHIELQLGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPY 572
           IYLL+HKS+ALT FI FKN IE QL HKIK IQTD G EY +FT +LQ HGI H   CPY
Sbjct: 76  IYLLQHKSQALTCFIHFKNMIENQLDHKIKCIQTDGGKEYIAFTKFLQEHGILHHISCPY 135

Query: 573 IHEQN 587
           IHEQN
Sbjct: 136 IHEQN 140


>gb|KYP31489.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 311

 Score =  181 bits (459), Expect = 2e-53
 Identities = 81/160 (50%), Positives = 109/160 (68%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           F +WH RLGHP+  IV+  L ++          +F+C  CC+GKAH+ PF QS+T Y +P
Sbjct: 120 FQLWHSRLGHPSPRIVKFAL-KHCNIPSIHFPDSFLCDSCCMGKAHQLPFVQSTTEYKSP 178

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           ++L+ +D+WGPSPV S+ G R+YI F+D +SR++WIYLL  KS+A  AF+ FK   ELQL
Sbjct: 179 IELVFTDIWGPSPVPSSTGARHYIIFLDAYSRYSWIYLLNSKSQAFDAFVQFKTSAELQL 238

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
           G K+KA+Q+D   EY  FT YL  HGI H   CP+ HEQN
Sbjct: 239 GMKVKALQSDNAKEYIKFTKYLTEHGIKHHFSCPHTHEQN 278


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score =  191 bits (485), Expect = 6e-53
 Identities = 84/158 (53%), Positives = 110/158 (69%)
 Frame = +3

Query: 114 IWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAPLQ 293
           IWH RLGHP+  IVQ V++            NF+C+ CCLGK H  PFP S + Y  PLQ
Sbjct: 451 IWHDRLGHPSFKIVQTVMSLCKLSKFNKILPNFVCKACCLGKIHMLPFPTSISEYQEPLQ 510

Query: 294 LIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQLGH 473
           L++SDLWGPSPV S+NGY+YY+ F+D FSR+ WIYLLR+KS +   F  FK   +LQLG 
Sbjct: 511 LVYSDLWGPSPVQSSNGYKYYVCFVDAFSRYNWIYLLRNKSNSFQTFQNFKAQAKLQLGF 570

Query: 474 KIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
           KIK +Q+DW GE+ +FT+YL  +GI H+  CP+ ++QN
Sbjct: 571 KIKCLQSDWRGEFCAFTDYLTINGIIHRIYCPHTYQQN 608


>gb|KYP31487.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 348

 Score =  181 bits (459), Expect = 6e-53
 Identities = 81/160 (50%), Positives = 109/160 (68%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           F +WH RLGHP+  IV+  L ++          +F+C  CC+GKAH+ PF QS+T Y +P
Sbjct: 120 FQLWHSRLGHPSPRIVKFAL-KHCNIPSIHFPDSFLCDSCCMGKAHQLPFVQSTTEYKSP 178

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           ++L+ +D+WGPSPV S+ G R+YI F+D +SR++WIYLL  KS+A  AF+ FK   ELQL
Sbjct: 179 IELVFTDIWGPSPVPSSTGARHYIIFLDAYSRYSWIYLLNSKSQAFDAFVQFKTSAELQL 238

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
           G K+KA+Q+D   EY  FT YL  HGI H   CP+ HEQN
Sbjct: 239 GMKVKALQSDNAKEYIKFTKYLTEHGIKHHFSCPHTHEQN 278


>gb|KYP32605.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 206

 Score =  176 bits (445), Expect = 1e-52
 Identities = 82/160 (51%), Positives = 108/160 (67%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           F +WH RLGHP+  I++  L +N          + +C+ CC+GKAH+ PF  S++ Y  P
Sbjct: 21  FTLWHSRLGHPSPKILKVAL-RNSHIPCNNFPDSVLCESCCMGKAHQLPFINSNSEYHTP 79

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           LQL+ SD+WGPSPVA++ G RYYI F+D FS+++WIYLL  KSEA TAF  FK+  ELQL
Sbjct: 80  LQLVFSDIWGPSPVATSTGARYYIVFLDAFSKYSWIYLLNSKSEAFTAFQQFKSSAELQL 139

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
             KIKAIQTD   E+   + YL  +GI H+  CP+ HEQN
Sbjct: 140 NTKIKAIQTDNAKEFIKLSKYLNENGIQHRLTCPHTHEQN 179


>gb|KYP75950.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 261

 Score =  176 bits (445), Expect = 7e-52
 Identities = 82/160 (51%), Positives = 108/160 (67%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           F +WH RLGHP+  I++  L +N          + +C+ CC+GKAH+ PF  S++ Y  P
Sbjct: 81  FTLWHSRLGHPSPKILKVAL-RNSHIPCNNFPDSVLCESCCMGKAHQLPFINSNSEYHTP 139

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           LQL+ SD+WGPSPVA++ G RYYI F+D FS+++WIYLL  KSEA TAF  FK+  ELQL
Sbjct: 140 LQLVFSDIWGPSPVATSTGARYYIVFLDAFSKYSWIYLLNSKSEAFTAFQQFKSSAELQL 199

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
             KIKAIQTD   E+   + YL  +GI H+  CP+ HEQN
Sbjct: 200 NTKIKAIQTDNAKEFIKLSKYLNENGIQHRLTCPHTHEQN 239


>gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 787

 Score =  182 bits (462), Expect = 3e-50
 Identities = 83/160 (51%), Positives = 109/160 (68%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           F +WH RLGHP+  IV+  L ++          +F+C  CC+GKAH+ PF QS+T Y +P
Sbjct: 494 FQLWHSRLGHPSPRIVKLAL-KHCNIPSSHFPDSFLCDSCCMGKAHQLPFVQSTTEYKSP 552

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           L+L+ +D+WGPSPV S+ G RYYI F+D +SR++WIYLL  KS+A  AF+ FK   ELQL
Sbjct: 553 LELVFTDIWGPSPVPSSTGARYYIIFLDAYSRYSWIYLLNSKSQAFDAFVQFKTSAELQL 612

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
           G K+KA+Q+D   EY  FT YL  HGI H+  CP  HEQN
Sbjct: 613 GMKLKALQSDNAKEYIKFTKYLTEHGIKHRFSCPDTHEQN 652


>gb|KYP44478.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 605

 Score =  178 bits (452), Expect = 1e-49
 Identities = 84/160 (52%), Positives = 108/160 (67%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           + IWH +LGH N  IV  V+ +           + +C+ CCLGK HK PF  S+T YT+P
Sbjct: 442 YRIWHAKLGHANYKIVHDVMNKCGVSVSKNSTFS-LCKSCCLGKLHKQPFYYSNTVYTSP 500

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           LQLI++D+WGP+P+ S++G +YYI FID FS+ TWIYL+ +KS+AL  F  FKN IE QL
Sbjct: 501 LQLIYTDIWGPAPIPSSSGSKYYIEFIDAFSKFTWIYLISNKSQALQCFSHFKNMIENQL 560

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
             KIK IQTD   EY +F+ YL  HGI H+  CPY HEQN
Sbjct: 561 NSKIKCIQTDGAKEYLAFSKYLNDHGILHRISCPYTHEQN 600


>gb|KYP61012.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 340

 Score =  171 bits (432), Expect = 6e-49
 Identities = 79/161 (49%), Positives = 107/161 (66%)
 Frame = +3

Query: 105 SFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTA 284
           S  +WH RLGHPN+ +++ V TQ            F C  CC+GK+ + P   S T Y+A
Sbjct: 90  SSTMWHTRLGHPNSHVLKLVHTQCNLLSSNTQVTKF-CSSCCVGKSRRLPSSASQTIYSA 148

Query: 285 PLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQ 464
           PL LI ++LWGPS + S +GY YY+ FID FS++TWIY L+ K E L+ F  FK  +ELQ
Sbjct: 149 PLDLIFTNLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKVETLSIFQQFKAMVELQ 208

Query: 465 LGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
              KIK++Q+DWGGEYR+FT++L T+GI H+  CP+ H QN
Sbjct: 209 FNTKIKSVQSDWGGEYRAFTSFLATNGIKHRVICPHTHHQN 249


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1268

 Score =  177 bits (448), Expect = 6e-48
 Identities = 85/171 (49%), Positives = 109/171 (63%)
 Frame = +3

Query: 75  PSCNVVAAVVSFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFP 254
           P+ +  A   S   WH RL HPN+ +++ VL              F C  CC+GK+H+ P
Sbjct: 406 PAVSAFAIPSSHTSWHTRLSHPNSHVLKLVLNHCNIAPSNRNVSEF-CSSCCVGKSHRLP 464

Query: 255 FPQSSTNYTAPLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAF 434
              S + Y+APL LI +DLWGPS V S +GY YY+ FID FS+ TWIY L+ KS+ L+ F
Sbjct: 465 SLVSESVYSAPLDLIFTDLWGPSHVVSHSGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVF 524

Query: 435 ITFKNHIELQLGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
             FK  +ELQL  KIK+IQ+DWGGEYRSFT +L THGI H+  CP+ H QN
Sbjct: 525 QQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGITHRLICPHTHHQN 575


>gb|KYP72181.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 363

 Score =  168 bits (426), Expect = 8e-48
 Identities = 74/161 (45%), Positives = 103/161 (63%)
 Frame = +3

Query: 105 SFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTA 284
           S  +WH RLGHPN   VQ +++Q            F C  CC+GKAH+ P   S + Y  
Sbjct: 136 SHTLWHARLGHPNFH-VQKLVSQQCNIPVVNKIDGFFCNACCMGKAHRLPSNLSDSVYKN 194

Query: 285 PLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQ 464
           PL+L++SDLWGP+P+ S+N Y+YY+ F+D +SR TWIYLL++KS+ LT F  FK  +ELQ
Sbjct: 195 PLELVYSDLWGPAPIQSSNNYKYYLSFVDAYSRFTWIYLLQNKSDTLTVFKQFKMMVELQ 254

Query: 465 LGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
               +K +Q  WGGE+R  + YL+  G+ H+  CP+ H QN
Sbjct: 255 FNTSLKILQIHWGGEFRPLSKYLKDLGVNHRVICPHTHHQN 295


>gb|KYP75926.1| Copia protein, partial [Cajanus cajan]
          Length = 285

 Score =  166 bits (420), Expect = 8e-48
 Identities = 78/160 (48%), Positives = 105/160 (65%)
 Frame = +3

Query: 108 FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTAP 287
           F +WH RLGHP+  I++  L +N          + +C+ C +GKAH+ PF  S++ Y  P
Sbjct: 52  FSLWHSRLGHPSPRILKVAL-RNSHIPCNNFPDSVLCESCFMGKAHQLPFINSNSEYHTP 110

Query: 288 LQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQL 467
           LQL+  D+WGPSPVA++ G RYYI F+D FS+++WIY L  KSEA TAF  F + +ELQL
Sbjct: 111 LQLVFLDIWGPSPVATSTGARYYIVFLDAFSKYSWIYPLNSKSEAFTAFQQFNSSVELQL 170

Query: 468 GHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
             KIKAIQTD   E+   + YL  +GI H+  CP+ HEQN
Sbjct: 171 NTKIKAIQTDNAKEFIKLSKYLNENGIQHRLTCPHTHEQN 210


>gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1102

 Score =  176 bits (446), Expect = 1e-47
 Identities = 80/162 (49%), Positives = 102/162 (62%)
 Frame = +3

Query: 102  VSFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYT 281
            +SF  WH RLGHPN  +++ V              NF C PCCLGK+H+ P   S T Y 
Sbjct: 542  ISFATWHSRLGHPNVDVMKHVSRNFNIQLVTNNKSNF-CTPCCLGKSHRLPSNLSKTIYN 600

Query: 282  APLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIEL 461
             P  L+++DLWGP+PV ST GY+YY+ F+D  +R TWIYLL++K++    F  F   +  
Sbjct: 601  TPFDLVYNDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKAQTFNVFKQFHAMVNN 660

Query: 462  QLGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
            Q  H IKA+QTDWGGEYRSFTNYL   GI H+  CP+ H QN
Sbjct: 661  QYHHPIKALQTDWGGEYRSFTNYLNEVGIQHRLICPHTHHQN 702


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 785

 Score =  174 bits (442), Expect = 2e-47
 Identities = 82/172 (47%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
 Frame = +3

Query: 75  PSCNVVAA-VVSFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKF 251
           PS N  +   V +  WH RLGHP+N ++++V              +F C PCCLGK+HK 
Sbjct: 390 PSANTASCHSVPYVTWHSRLGHPHNDVIKSVFRLCNFPIINKTASDF-CTPCCLGKSHKL 448

Query: 252 PFPQSSTNYTAPLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTA 431
           P   S T Y  P +LI+SDLWGP+P+ S NGY+YY+ F+D  +R TWI+LL+ K+  L  
Sbjct: 449 PSNSSKTVYHTPFELIYSDLWGPAPITSDNGYQYYVTFVDAHTRFTWIFLLKRKAHTLDV 508

Query: 432 FITFKNHIELQLGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
           F  F   I+ Q    IKAIQTDWGGE+RSFT+YL  +GI H+  CP+ H QN
Sbjct: 509 FKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPHTHHQN 560


>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1007

 Score =  175 bits (444), Expect = 2e-47
 Identities = 80/168 (47%), Positives = 116/168 (69%)
 Frame = +3

Query: 84  NVVAAVVSFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQ 263
           N   +  +  +WH RLGHP++ IV+ VL +           N  C  CCLGK H+ PF Q
Sbjct: 86  NSAQSFSNLQLWHARLGHPSSKIVKTVLDK--CQISCNTNNNLNCHSCCLGKVHQLPFIQ 143

Query: 264 SSTNYTAPLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITF 443
           S+T Y+ PL+L+ +D+WGPSP+AST+G RYYI F+D FS+++WIYLL++KS+AL AF+  
Sbjct: 144 STTVYSKPLELVFTDIWGPSPIASTDGSRYYIVFLDAFSKYSWIYLLQYKSQALYAFLQL 203

Query: 444 KNHIELQLGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
           K+  E QLG K+KA+Q+D   E+ +F+ YL+ +GI H+  CP+ H+QN
Sbjct: 204 KSLAEKQLGTKLKALQSDNAKEFLTFSPYLKQNGIIHRLSCPHTHQQN 251


>gb|KYP63768.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 678

 Score =  173 bits (439), Expect = 2e-47
 Identities = 83/183 (45%), Positives = 112/183 (61%), Gaps = 13/183 (7%)
 Frame = +3

Query: 78  SCNVVAAVVS-------------FDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFIC 218
           SCN +++ +S             + +W  RLGH N  I+Q VL  +          N +C
Sbjct: 298 SCNSISSSISVANSTNGSTQLSLYKLWQSRLGHANYKIIQHVLHNSNIYVPRNYTFN-VC 356

Query: 219 QPCCLGKAHKFPFPQSSTNYTAPLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIY 398
           + CC GK+H  PF  S T Y  PLQL+ SD+WGP PV S+NG RYYIHF+D +S++TWIY
Sbjct: 357 KSCCYGKSHNMPFYSSKTAYNKPLQLVFSDIWGPVPVPSSNGSRYYIHFLDAYSKYTWIY 416

Query: 399 LLRHKSEALTAFITFKNHIELQLGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIH 578
           L++ KS+AL  F+ FK  I+ QL  KIK +QTD G +Y  F+++L  HGI H+  C Y H
Sbjct: 417 LIQFKSQALAYFMHFKKMIDNQLDMKIKCLQTDGGKKYTIFSSFLNEHGIIHRLSCLYTH 476

Query: 579 EQN 587
           EQN
Sbjct: 477 EQN 479


>gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 533

 Score =  171 bits (433), Expect = 2e-47
 Identities = 74/161 (45%), Positives = 102/161 (63%)
 Frame = +3

Query: 105 SFDIWHKRLGHPNNSIVQAVLTQNXXXXXXXXXXNFICQPCCLGKAHKFPFPQSSTNYTA 284
           S+D+WH RL H +  IVQAV+             + +C+ CC+GK+H  PF  S T Y +
Sbjct: 344 SYDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNS 403

Query: 285 PLQLIHSDLWGPSPVASTNGYRYYIHFIDTFSRHTWIYLLRHKSEALTAFITFKNHIELQ 464
           PL+L++SD+WGPS  AS  G+RYY+HF D FS++TWIY + +KSE    FI FK+ +E Q
Sbjct: 404 PLELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQ 463

Query: 465 LGHKIKAIQTDWGGEYRSFTNYLQTHGIFHQHPCPYIHEQN 587
            GHKIK  Q+D G E+   T     +GI H+  CP+ H+QN
Sbjct: 464 FGHKIKMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQN 504