BLASTX nr result

ID: Rehmannia28_contig00047504 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00047504
         (417 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240...    67   2e-10
ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214...    65   4e-10
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-...    64   1e-09
ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-...    59   7e-08
ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240...    59   1e-07
ref|XP_010913227.1| PREDICTED: replication protein A 70 kDa DNA-...    57   1e-07
ref|XP_015954672.1| PREDICTED: replication protein A 70 kDa DNA-...    55   2e-06

>ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240911 isoform X1
           [Nicotiana sylvestris]
          Length = 282

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
 Frame = +1

Query: 1   GSFWISATIINIIGD--WWYLSCKKCPKKLTRTGEKFYCERCDKFYQTGNFRWINCIF*V 174
           G++W+ ATI+++  D  W YL+CK C KKL + G KFYC++C++     +    N  F  
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQSVIHRYDYNLYFLY 106

Query: 175 DYIICIIDVF*LLPYSRNLV**ICLFFP*RYRIQFEVGDDTANAQLLCWDRECEILIGK 351
            Y+I  I                      RYR+Q +V D T    LL WD++   +I K
Sbjct: 107 YYMILKIQTL------------------SRYRLQVKVMDCTDTISLLLWDKDGTKIIEK 147


>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
           sylvestris]
          Length = 213

 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
 Frame = +1

Query: 1   GSFWISATIINIIGD--WWYLSCKKCPKKLTRTGEKFYCERCDKFYQTGNFRWINCIF*V 174
           G++W+ ATII++  D  W YL+CK C KKL + G KFYC++C++     +          
Sbjct: 86  GNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQSVTH---------- 135

Query: 175 DYIICIIDVF*LLPYSRNLV**ICLFFP*RYRIQFEVGDDTANAQLLCWDRECEILIGK 351
                                        RYR+Q +V D T    LL WD++   +IGK
Sbjct: 136 -----------------------------RYRLQVKVMDCTGTISLLLWDKDATKIIGK 165


>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
           partial [Nicotiana sylvestris]
          Length = 244

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 1   GSFWISATIINII--GDWWYLSCKKCPKKLTRTGEKFYCERCDKFYQTGNFRWINCIF*V 174
           G  WI AT++N++   +W YL CKKC KK+ + G KF+C++CD+   +            
Sbjct: 19  GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRLDSSVTH--------- 69

Query: 175 DYIICIIDVF*LLPYSRNLV**ICLFFP*RYRIQFEVGDDTANAQLLCWDRECEILIGK 351
                                        RY+ + +V D T    LL WDRE   LIGK
Sbjct: 70  -----------------------------RYKFRVQVMDHTGFISLLLWDREATSLIGK 99


>ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Nicotiana sylvestris]
          Length = 302

 Score = 59.3 bits (142), Expect = 7e-08
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   GSFWISATIINII--GDWWYLSCKKCPKKLTRTGEKFYCERCDKFYQTGNFRWINCIF*V 174
           G  WI AT++N++   +W YL CKKC KK+ + G KF+C++CD+   +            
Sbjct: 226 GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGNKFHCKKCDRLDSSATH--------- 276

Query: 175 DYIICIIDVF*LLPYSRNLV**ICLFFP*RYRIQFEVGDDTANAQLLCWDRE 330
                                        RY+++ +V D T    LL WDRE
Sbjct: 277 -----------------------------RYKLRVQVMDHTGFISLLLWDRE 299


>ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240911 isoform X2
           [Nicotiana sylvestris]
          Length = 278

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
 Frame = +1

Query: 1   GSFWISATIINIIGD--WWYLSCKKCPKKLTRTGEKFYCERCDKFYQTGNFRWINCIF*V 174
           G++W+ ATI+++  D  W YL+CK C KKL + G KFYC++C++     +          
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQSVIH---------- 96

Query: 175 DYIICIIDVF*LLPYSRNLV**ICLFFP*RYRIQFEVGDDTANAQLLCWDRECEILIGK 351
                                        RYR+Q +V D T    LL WD++   +I K
Sbjct: 97  -----------------------------RYRLQVKVMDCTDTISLLLWDKDGTKIIEK 126


>ref|XP_010913227.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
           [Elaeis guineensis]
          Length = 139

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 31/114 (27%), Positives = 50/114 (43%)
 Frame = +1

Query: 46  WWYLSCKKCPKKLTRTGEKFYCERCDKFYQTGNFRWINCIF*VDYIICIIDVF*LLPYSR 225
           W+Y  C++CPKKL + G +F+CE+CDKFY +                   DV        
Sbjct: 40  WYYNFCRRCPKKLEQAGGRFFCEKCDKFYPS-------------------DVA------- 73

Query: 226 NLV**ICLFFP*RYRIQFEVGDDTANAQLLCWDRECEILIGK*CSVVKREMTGV 387
                       ++++Q +VGD+T     L +D E    +GK  S ++  +  V
Sbjct: 74  ------------KFKVQVKVGDETGTTSFLIFDHEAVQFLGKTASEIRDRIVEV 115


>ref|XP_015954672.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
           [Arachis duranensis]
          Length = 538

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 4/132 (3%)
 Frame = +1

Query: 1   GSFWISATIINII---GDWWYLSCKKCPKKL-TRTGEKFYCERCDKFYQTGNFRWINCIF 168
           G  W++ TI+ I     DW+Y +C++CPKK+ T  G K+ C++C   + T +        
Sbjct: 291 GPIWVAGTIVAINCSKNDWYYKACRRCPKKVETPVGNKYECDKCGYTHGTASI------- 343

Query: 169 *VDYIICIIDVF*LLPYSRNLV**ICLFFP*RYRIQFEVGDDTANAQLLCWDRECEILIG 348
                                          RY+++  V D T +  LL WDRE   L G
Sbjct: 344 -------------------------------RYKVEVMVFDGTGSISLLLWDRETSQLCG 372

Query: 349 K*CSVVKREMTG 384
           K    V  E  G
Sbjct: 373 KQAEKVLEEDGG 384


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