BLASTX nr result

ID: Rehmannia28_contig00046489 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046489
         (640 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008242398.1| PREDICTED: uncharacterized protein LOC103340...    43   6e-06
ref|XP_009598504.1| PREDICTED: uncharacterized protein LOC104094...    41   7e-06

>ref|XP_008242398.1| PREDICTED: uncharacterized protein LOC103340732 [Prunus mume]
          Length = 139

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = -3

Query: 572 GFVFCNC*KRAQLQTSWTNDNHGRRFYGCVDWKV 471
           G   C+C  + +L TSWT++N GRRF+GC D+ V
Sbjct: 16  GQPICHCGNQCRLTTSWTDNNPGRRFWGCEDYGV 49



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 411 RGGCGFFDWQDPPITYQALNIIFGLRAKVDVLDNEVKKFAKE 286
           R GC FF+W DP +  ++  +I GL  ++   + E +K  KE
Sbjct: 50  RRGCAFFEWYDPQVCERSKIVISGLLKRLRKEEEENRKLKKE 91


>ref|XP_009598504.1| PREDICTED: uncharacterized protein LOC104094296 [Nicotiana
           tomentosiformis]
          Length = 138

 Score = 40.8 bits (94), Expect(2) = 7e-06
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = -3

Query: 590 STASSPGFVFCNC*KRAQLQTSWTNDNHGRRFYGC 486
           ST S  G   C+C   A L  SW++ N GRRFYGC
Sbjct: 5   STTSRNGMEICHCGFNAPLTISWSSANPGRRFYGC 39



 Score = 36.6 bits (83), Expect(2) = 7e-06
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = -2

Query: 435 RFIGYLVQRGGCGFFDWQDPPITYQALNIIFGLRAKVDVLDNEVKKFAKEKQRLKWMLLA 256
           RF G  + RG C +F W D  +  QA  +I GL  +V+       +  K   RLKW+ + 
Sbjct: 35  RFYGCKLGRGSCKYFRWHDDEMPDQAKGVIQGLLKRVE-------RTEKIVVRLKWLFVV 87

Query: 255 WLV 247
            +V
Sbjct: 88  VVV 90


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