BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046478
         (487 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]   100   1e-21
gb|EEF44034.1| conserved hypothetical protein [Ricinus communis]       64   9e-20
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    77   1e-13
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    73   3e-12
ref|XP_013442822.1| NADH-quinone oxidoreductase protein [Medicag...    52   1e-07

>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +1

Query: 289 SLSVNRNIVHRYSSMQRGRDDVTYYDHVQKCCPSSRQYGTSQQLPFFY 432
           S+ VNRNIVHRYSSMQRGRDDVTYYDHVQKCCPS+RQYGTSQQLPF Y
Sbjct: 339 SIDVNRNIVHRYSSMQRGRDDVTYYDHVQKCCPSARQYGTSQQLPFLY 386



 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
 Frame = +3

Query: 36  RFPPTDRSTPITPRTVQDSYHLSYGFLTSLL-FSGRSALSID 158
           + PPTDRSTPITPRTVQDSYHLSYG+L++   FSGRSALSID
Sbjct: 300 KIPPTDRSTPITPRTVQDSYHLSYGWLSNFTSFSGRSALSID 341


>gb|EEF44034.1| conserved hypothetical protein [Ricinus communis]
          Length = 431

 Score = 63.9 bits (154), Expect(2) = 9e-20
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -3

Query: 359 YVTSSRPRCIEEYLCTMFRFTDKEDRVGVG 270
           Y+TSSRPRCIEEYLCTMFRFTDKEDRV VG
Sbjct: 376 YITSSRPRCIEEYLCTMFRFTDKEDRVRVG 405



 Score = 59.7 bits (143), Expect(2) = 9e-20
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -2

Query: 273 GVYDVILKYDPGRYMLTMGRKQEPLCK 193
           GVY+VILKYDPGRYMLTMGRKQEPLCK
Sbjct: 405 GVYNVILKYDPGRYMLTMGRKQEPLCK 431


>gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
          Length = 2992

 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 54/104 (51%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
 Frame = -1

Query: 421  GAVERFHIAETKGSTSVRDRSMSRRLVPAASKSTYALCSDSLIRKIELGW--GLRCDTQV 248
            G+      AE KG TSVR R MS RLV AASKSTYALCS SLIRKIELGW   +R  T V
Sbjct: 1761 GSSSEVPYAEPKGRTSVRHRCMSPRLVLAASKSTYALCSGSLIRKIELGWRSTMRYYTIV 1820

Query: 247  *PGEIHANYG*EAGTFM*II*GGYRSLILPSIDRAERPEKRSEV 116
             PG   A    EAG+ +  +    RSL LPSI ++    K  E+
Sbjct: 1821 CPGGKDAQLKTEAGSVLLKMSEVTRSLRLPSIRQSGTTRKEVEL 1864



 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 65/172 (37%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
 Frame = -2

Query: 486  RDSGGRGKAWAYLSR*DPI-------KERELLRGSILPRRR--AALLYVIVVCH---VVS 343
            R SG  G  WAYLSR           K R  +R   +  R   AA      +C    +  
Sbjct: 1746 RLSGKGGGGWAYLSRGSSSEVPYAEPKGRTSVRHRCMSPRLVLAASKSTYALCSGSLIRK 1805

Query: 342  SPLHRRVPMHYVPIH**GR*SWGGVYDVILKYDPGRYMLTMGRKQEPLCK*FRGVTDLLY 163
              L  R  M Y  I         G  D  LK + G  +L M             VT  L 
Sbjct: 1806 IELGWRSTMRYYTI------VCPGGKDAQLKTEAGSVLLKMSE-----------VTRSLR 1848

Query: 162  YHRSTERNDQKKEVKLESRMIGGNYLVRFGG*SAYSDQWGGIFGSIEHTGNW 7
                 +    +KEV+LESRMIGG YLVRFGG +AYS   GGI GSIEHTGNW
Sbjct: 1849 LPSIRQSGTTRKEVELESRMIGGYYLVRFGGLAAYS---GGILGSIEHTGNW 1897


>gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
          Length = 2992

 Score = 73.2 bits (178), Expect = 3e-12
 Identities = 52/104 (50%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = -1

Query: 421  GAVERFHIAETKGSTSVRDRSMSRRLVPAASKSTYALCSDSLIRKIELGWGLRCDTQ--V 248
            G+      AE KG TSVR R MS RLV AASKSTYALCS SLIRKIELGW         V
Sbjct: 1761 GSSSEVPYAEPKGRTSVRHRCMSPRLVLAASKSTYALCSGSLIRKIELGWRSTMSYYCIV 1820

Query: 247  *PGEIHANYG*EAGTFM*II*GGYRSLILPSIDRAERPEKRSEV 116
             PG   A    EAG+ +  +    RSL LPSI ++    K  E+
Sbjct: 1821 CPGGKDAQLKTEAGSVLLKMSEVTRSLRLPSIRQSGTTRKEVEL 1864



 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 43/89 (48%), Positives = 49/89 (55%)
 Frame = -2

Query: 273  GVYDVILKYDPGRYMLTMGRKQEPLCK*FRGVTDLLYYHRSTERNDQKKEVKLESRMIGG 94
            G  D  LK + G  +L M             VT  L      +    +KEV+LESRMIGG
Sbjct: 1823 GGKDAQLKTEAGSVLLKMSE-----------VTRSLRLPSIRQSGTTRKEVELESRMIGG 1871

Query: 93   NYLVRFGG*SAYSDQWGGIFGSIEHTGNW 7
             YLVRFGG +AYS   GGI GSIEHTGNW
Sbjct: 1872 YYLVRFGGLAAYS---GGILGSIEHTGNW 1897


>ref|XP_013442822.1| NADH-quinone oxidoreductase protein [Medicago truncatula]
           gi|657370786|gb|KEH16847.1| NADH-quinone oxidoreductase
           protein [Medicago truncatula]
          Length = 346

 Score = 52.4 bits (124), Expect(2) = 1e-07
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -1

Query: 433 HKRTGAVERFHIAETKGSTSVRDRSMSRR 347
           HK TGAV+RFHIAE KGSTSVRDRSMS R
Sbjct: 18  HKGTGAVDRFHIAEPKGSTSVRDRSMSSR 46



 Score = 30.0 bits (66), Expect(2) = 1e-07
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = -3

Query: 350 SSRPRCIEEYLCTM 309
           SSRPRCIE+YLC++
Sbjct: 44  SSRPRCIEKYLCSI 57