BLASTX nr result

ID: Rehmannia28_contig00046183 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046183
         (461 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081976.1| PREDICTED: pentatricopeptide repeat-containi...    51   2e-09
ref|XP_012855914.1| PREDICTED: pentatricopeptide repeat-containi...    50   1e-08
gb|EYU21997.1| hypothetical protein MIMGU_mgv1a000826mg [Erythra...    50   1e-08

>ref|XP_011081976.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Sesamum indicum]
          Length = 1113

 Score = 50.8 bits (120), Expect(3) = 2e-09
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +1

Query: 199 VLEADGHKADVVTFTIFIDALCKVGTRRRSLISLREKRKTGKL 327
           ++EADG+KADVVTFTI +DALCKVG    + + L E ++ G L
Sbjct: 359 LMEADGYKADVVTFTILVDALCKVGKVNDAFMVLGEMKEVGIL 401



 Score = 31.2 bits (69), Expect(3) = 2e-09
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 39  CTQLVVTY---IDALCNEGKID----VHEKCRI*NIAA*LLTYRTMLGK 164
           C   VVTY   IDALCN GK+D    V +K +  +     +TY TML K
Sbjct: 295 CAPDVVTYTVLIDALCNAGKLDVAKEVFKKMKCSSHKPDWVTYITMLDK 343



 Score = 25.8 bits (55), Expect(3) = 2e-09
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 167 SVAGDLHSVRKFWRLM 214
           S  GDL SVR+FW LM
Sbjct: 345 SDCGDLDSVREFWSLM 360


>ref|XP_012855914.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Erythranthe guttata]
          Length = 1107

 Score = 50.4 bits (119), Expect(3) = 1e-08
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +1

Query: 199 VLEADGHKADVVTFTIFIDALCKVGTRRRSLISLREKRK 315
           ++EADGHKADVVTFTI +DALCKVG    +   L E +K
Sbjct: 353 LMEADGHKADVVTFTILVDALCKVGKVGEAFDVLDEMKK 391



 Score = 30.4 bits (67), Expect(3) = 1e-08
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 39  CTQLVVTY---IDALCNEGKI----DVHEKCRI*NIAA*LLTYRTMLGK 164
           C   VVTY   IDALCN GK+    +V EK +  +     +TY TML K
Sbjct: 289 CAPDVVTYTVLIDALCNAGKLEVAKEVFEKMKNGSHKPDRVTYITMLDK 337



 Score = 24.3 bits (51), Expect(3) = 1e-08
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 176 GDLHSVRKFWRLM 214
           GDL SVR++W LM
Sbjct: 342 GDLDSVREYWSLM 354


>gb|EYU21997.1| hypothetical protein MIMGU_mgv1a000826mg [Erythranthe guttata]
          Length = 971

 Score = 50.4 bits (119), Expect(3) = 1e-08
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +1

Query: 199 VLEADGHKADVVTFTIFIDALCKVGTRRRSLISLREKRK 315
           ++EADGHKADVVTFTI +DALCKVG    +   L E +K
Sbjct: 217 LMEADGHKADVVTFTILVDALCKVGKVGEAFDVLDEMKK 255



 Score = 30.4 bits (67), Expect(3) = 1e-08
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 39  CTQLVVTY---IDALCNEGKI----DVHEKCRI*NIAA*LLTYRTMLGK 164
           C   VVTY   IDALCN GK+    +V EK +  +     +TY TML K
Sbjct: 153 CAPDVVTYTVLIDALCNAGKLEVAKEVFEKMKNGSHKPDRVTYITMLDK 201



 Score = 24.3 bits (51), Expect(3) = 1e-08
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 176 GDLHSVRKFWRLM 214
           GDL SVR++W LM
Sbjct: 206 GDLDSVREYWSLM 218


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