BLASTX nr result
ID: Rehmannia28_contig00046095
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00046095
(379 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011080768.1| PREDICTED: putative tRNA pseudouridine synth... 139 3e-36
ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synth... 125 2e-31
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth... 107 2e-25
ref|XP_010326264.1| PREDICTED: putative tRNA pseudouridine synth... 107 4e-25
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth... 107 4e-25
ref|XP_015088255.1| PREDICTED: putative tRNA pseudouridine synth... 107 4e-25
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth... 107 4e-25
ref|XP_015088254.1| PREDICTED: putative tRNA pseudouridine synth... 107 5e-25
emb|CDP04070.1| unnamed protein product [Coffea canephora] 105 3e-24
emb|CBI15850.3| unnamed protein product [Vitis vinifera] 105 4e-24
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera] 105 4e-24
ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synth... 105 5e-24
ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synth... 105 5e-24
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu... 104 8e-24
gb|KVH94122.1| Pseudouridine synthase, catalytic domain-containi... 103 2e-23
ref|XP_009789299.1| PREDICTED: putative tRNA pseudouridine synth... 102 3e-23
ref|XP_009789298.1| PREDICTED: putative tRNA pseudouridine synth... 102 4e-23
ref|XP_009592051.1| PREDICTED: putative tRNA pseudouridine synth... 101 5e-23
ref|XP_009592050.1| PREDICTED: putative tRNA pseudouridine synth... 101 5e-23
ref|XP_009592049.1| PREDICTED: putative tRNA pseudouridine synth... 101 5e-23
>ref|XP_011080768.1| PREDICTED: putative tRNA pseudouridine synthase [Sesamum indicum]
Length = 561
Score = 139 bits (349), Expect = 3e-36
Identities = 74/115 (64%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Frame = +1
Query: 46 SERFFSDAEDIHESNESLAIGTGE---NXXXXXXXXXXAEVFDAHEDNLKEENRTIPVLA 216
SE SD ED HE+NESLA GE + A +FD + N K +N +PV A
Sbjct: 314 SELEESDEEDTHEANESLATEFGETKTDSLLPSSGRTLAGLFDEDKANSKGQNLIVPVCA 373
Query: 217 RWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLHQIRKMV 378
RWLHEPD++D+LSASHFRKIFQC CGKLEQLSG+NYVEISICGESFMLHQIRKMV
Sbjct: 374 RWLHEPDDRDRLSASHFRKIFQCRCGKLEQLSGLNYVEISICGESFMLHQIRKMV 428
>ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synthase [Erythranthe
guttata] gi|604347444|gb|EYU45681.1| hypothetical
protein MIMGU_mgv1a004890mg [Erythranthe guttata]
Length = 506
Score = 125 bits (314), Expect = 2e-31
Identities = 65/115 (56%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Frame = +1
Query: 37 LHISERFFSDAEDIHESNESLAIGTGENXXXXXXXXXXAEVFDAHEDNLKEENRTIPVLA 216
L + F S+ D E E + T + + ED K++N PVLA
Sbjct: 259 LDVQSEFVSEGSDDEEEEEDTNVVTESLATEAEETKYDSLLPKDEEDQPKKQNLVSPVLA 318
Query: 217 RWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLHQIRKMV 378
RWLHEPDEKD++SASHFRKIFQC CGKLEQLSG+N+VEISICGESFMLHQIRKMV
Sbjct: 319 RWLHEPDEKDRISASHFRKIFQCSCGKLEQLSGMNFVEISICGESFMLHQIRKMV 373
>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum
tuberosum]
Length = 423
Score = 107 bits (268), Expect = 2e-25
Identities = 49/66 (74%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
K+ N IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLH
Sbjct: 229 KDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLH 288
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 289 QIRKMV 294
>ref|XP_010326264.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum
lycopersicum]
Length = 473
Score = 107 bits (268), Expect = 4e-25
Identities = 49/66 (74%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
K+ N IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLH
Sbjct: 266 KDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLH 325
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 326 QIRKMV 331
>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
tuberosum]
Length = 487
Score = 107 bits (268), Expect = 4e-25
Identities = 49/66 (74%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
K+ N IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLH
Sbjct: 293 KDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLH 352
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 353 QIRKMV 358
>ref|XP_015088255.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum
pennellii]
Length = 496
Score = 107 bits (268), Expect = 4e-25
Identities = 49/66 (74%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
K+ N IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLH
Sbjct: 289 KDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLH 348
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 349 QIRKMV 354
>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
lycopersicum]
Length = 496
Score = 107 bits (268), Expect = 4e-25
Identities = 49/66 (74%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
K+ N IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLH
Sbjct: 289 KDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLH 348
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 349 QIRKMV 354
>ref|XP_015088254.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
pennellii]
Length = 503
Score = 107 bits (268), Expect = 5e-25
Identities = 49/66 (74%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
K+ N IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLH
Sbjct: 289 KDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLH 348
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 349 QIRKMV 354
>emb|CDP04070.1| unnamed protein product [Coffea canephora]
Length = 538
Score = 105 bits (263), Expect = 3e-24
Identities = 50/68 (73%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Frame = +1
Query: 178 NLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFM 354
+LK++N +P+ ARWL+EPD +DKLSA+HFRKIFQC CGKLE++ G+NYVEI ICGESFM
Sbjct: 339 SLKKQNSALPI-ARWLYEPDARDKLSAAHFRKIFQCYCGKLERMCGMNYVEIWICGESFM 397
Query: 355 LHQIRKMV 378
LHQIRKMV
Sbjct: 398 LHQIRKMV 405
>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 105 bits (261), Expect = 4e-24
Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 169 HEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGE 345
+E LKE++ + V ARWLH PDE+D++SASHFRKIF C CGKLE+ G++YVE+SICGE
Sbjct: 292 NEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGE 351
Query: 346 SFMLHQIRKMV 378
SFMLHQIRKMV
Sbjct: 352 SFMLHQIRKMV 362
>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
Length = 602
Score = 105 bits (262), Expect = 4e-24
Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 169 HEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGE 345
+E LKE++ + V ARWLH PDE+D++SASHFRKIF C CGKLE+ G++YVE+SICGE
Sbjct: 313 NEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGE 372
Query: 346 SFMLHQIRKMV 378
SFMLHQIRKMV
Sbjct: 373 SFMLHQIRKMV 383
>ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Vitis
vinifera]
Length = 516
Score = 105 bits (261), Expect = 5e-24
Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 169 HEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGE 345
+E LKE++ + V ARWLH PDE+D++SASHFRKIF C CGKLE+ G++YVE+SICGE
Sbjct: 313 NEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGE 372
Query: 346 SFMLHQIRKMV 378
SFMLHQIRKMV
Sbjct: 373 SFMLHQIRKMV 383
>ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Vitis
vinifera]
Length = 520
Score = 105 bits (261), Expect = 5e-24
Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 169 HEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGE 345
+E LKE++ + V ARWLH PDE+D++SASHFRKIF C CGKLE+ G++YVE+SICGE
Sbjct: 313 NEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGE 372
Query: 346 SFMLHQIRKMV 378
SFMLHQIRKMV
Sbjct: 373 SFMLHQIRKMV 383
>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
gi|550325882|gb|EEE95884.2| hypothetical protein
POPTR_0013s15030g [Populus trichocarpa]
Length = 505
Score = 104 bits (259), Expect = 8e-24
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +1
Query: 100 AIGTGENXXXXXXXXXXAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIF 279
A G+ EN + + D + D LK+++ +P+ ARWLHEPDE D++ A+HFRKIF
Sbjct: 275 ASGSEENHVELSQNSLESSICDLNGDILKDQSSNLPLRARWLHEPDETDRIGAAHFRKIF 334
Query: 280 QC-CGKLEQLSGVNYVEISICGESFMLHQIRKMV 378
+C CGKLE+ G ++VEISI GESFMLHQIRKMV
Sbjct: 335 RCSCGKLEKSLGFDFVEISIWGESFMLHQIRKMV 368
>gb|KVH94122.1| Pseudouridine synthase, catalytic domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 998
Score = 103 bits (258), Expect = 2e-23
Identities = 55/112 (49%), Positives = 70/112 (62%), Gaps = 11/112 (9%)
Frame = +1
Query: 73 DIHESNESLAIGTGENXXXXXXXXXXAEVFDAHEDN---LKEEN-------RTIPVLARW 222
D + ESL G GE ++ H D+ L +E+ + +P+LA+W
Sbjct: 862 DDSDGEESLGYGDGEEALGTGEMFDDEQMSLRHIDSDTELVDESDANGNSLKDLPILAKW 921
Query: 223 LHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLHQIRKM 375
LHEPDEKD+LS SHFR+IFQC CGK+EQL G YVEISICGESFMLHQ+ +
Sbjct: 922 LHEPDEKDRLSGSHFRRIFQCSCGKMEQLFGARYVEISICGESFMLHQVSNL 973
>ref|XP_009789299.1| PREDICTED: putative tRNA pseudouridine synthase isoform X3
[Nicotiana sylvestris]
Length = 429
Score = 102 bits (253), Expect = 3e-23
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
KE +P+LARWLHE D +DKLS++HFR+IF C CGKLE+L +NYVE+SICGESFMLH
Sbjct: 228 KELYSALPILARWLHETDARDKLSSAHFRRIFHCHCGKLEKLLSMNYVEVSICGESFMLH 287
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 288 QIRKMV 293
>ref|XP_009789298.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2
[Nicotiana sylvestris]
Length = 437
Score = 102 bits (253), Expect = 4e-23
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
KE +P+LARWLHE D +DKLS++HFR+IF C CGKLE+L +NYVE+SICGESFMLH
Sbjct: 236 KELYSALPILARWLHETDARDKLSSAHFRRIFHCHCGKLEKLLSMNYVEVSICGESFMLH 295
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 296 QIRKMV 301
>ref|XP_009592051.1| PREDICTED: putative tRNA pseudouridine synthase isoform X5
[Nicotiana tomentosiformis]
Length = 423
Score = 101 bits (252), Expect = 5e-23
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
KE +P+LARWLHE D +DKLS++HFR+IF C CGKLE+L +NYVE+SICGESFMLH
Sbjct: 222 KELYPVLPILARWLHETDARDKLSSAHFRRIFHCHCGKLEKLFSMNYVEVSICGESFMLH 281
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 282 QIRKMV 287
>ref|XP_009592050.1| PREDICTED: putative tRNA pseudouridine synthase isoform X4
[Nicotiana tomentosiformis]
Length = 429
Score = 101 bits (252), Expect = 5e-23
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
KE +P+LARWLHE D +DKLS++HFR+IF C CGKLE+L +NYVE+SICGESFMLH
Sbjct: 228 KELYPVLPILARWLHETDARDKLSSAHFRRIFHCHCGKLEKLFSMNYVEVSICGESFMLH 287
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 288 QIRKMV 293
>ref|XP_009592049.1| PREDICTED: putative tRNA pseudouridine synthase isoform X3
[Nicotiana tomentosiformis]
Length = 437
Score = 101 bits (252), Expect = 5e-23
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 184 KEENRTIPVLARWLHEPDEKDKLSASHFRKIFQC-CGKLEQLSGVNYVEISICGESFMLH 360
KE +P+LARWLHE D +DKLS++HFR+IF C CGKLE+L +NYVE+SICGESFMLH
Sbjct: 236 KELYPVLPILARWLHETDARDKLSSAHFRRIFHCHCGKLEKLFSMNYVEVSICGESFMLH 295
Query: 361 QIRKMV 378
QIRKMV
Sbjct: 296 QIRKMV 301