BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00046029
         (352 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP41416.1| Retrovirus-related Pol polyprotein from transposo...    82   3e-17
gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposo...    79   4e-16
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...    82   8e-16
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    82   8e-16
ref|XP_013731927.1| PREDICTED: uncharacterized protein LOC106435...    81   1e-15
ref|XP_013690295.1| PREDICTED: uncharacterized protein LOC106394...    81   1e-15
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...    80   2e-15
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    79   5e-15
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    79   5e-15
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    79   9e-15
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...    77   2e-14
gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposo...    77   2e-14
gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]     77   2e-14
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...    77   2e-14
gb|KYP54595.1| Retrovirus-related Pol polyprotein from transposo...    77   4e-14
gb|KYP45977.1| Retrovirus-related Pol polyprotein from transposo...    74   5e-14
gb|KYP74197.1| Retrovirus-related Pol polyprotein from transposo...    76   5e-14
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...    76   6e-14
emb|CAN67587.1| hypothetical protein VITISV_036279 [Vitis vinifera]    76   8e-14
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    76   8e-14

>gb|KYP41416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 201

 Score = 82.4 bits (202), Expect = 3e-17
 Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
 Frame = -2

Query: 246 WHMRLGHPNSNVMKHVLSNKEL-LPNLDS-SFCDACHIGKSKHKHYNPSLTATTQPLEII 73
           W  RLGHP+S +++ VL N  + +P+ DS SFC+AC  GKS    +  S++   +PL++I
Sbjct: 1   WRRRLGHPSSKILEQVLKNWNIKVPSKDSLSFCEACQFGKSHLLPFKSSISRAKKPLDLI 60

Query: 72  HSDVWGPSPILSKDGFRF 19
           H+DVWGP+PI S  GFR+
Sbjct: 61  HTDVWGPAPISSSSGFRY 78


>gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 201

 Score = 79.3 bits (194), Expect = 4e-16
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = -2

Query: 249 LWHMRLGHPNSNVMKHVLS--NKELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPLEI 76
           LWH RLGHP+  ++  VL   N  +  N DS FC +C +GKS    +  S T  T PLE+
Sbjct: 38  LWHSRLGHPSPRIVNTVLKSCNMPIAKNSDSFFCQSCCMGKSHQLPFIDSKTVYTSPLEL 97

Query: 75  IHSDVWGPSPILSKDGFRFMCI 10
           I+SD+WGPSPI + +G R+  +
Sbjct: 98  IYSDIWGPSPIPATNGARYYIV 119


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHV--LSNKELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPLE 79
           + WH +LGHPNS V+  V  L N E  P  +  FC+AC  GK+ +  +  S++   +PL+
Sbjct: 365 ETWHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLD 424

Query: 78  IIHSDVWGPSPILSKDGFRF 19
           ++HSDVWGP+PI S  GF++
Sbjct: 425 LVHSDVWGPAPISSVSGFKY 444


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHVLS--NKELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPLE 79
           DLWH RLGHP++  +K+VLS  N   +  +DS+FC +C +GK     ++ S T  T+PLE
Sbjct: 522 DLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLE 581

Query: 78  IIHSDVWGPSPILSKDGFRF 19
           +IH D+WGP+ +LS  G+R+
Sbjct: 582 LIHLDLWGPTLVLSNSGYRY 601


>ref|XP_013731927.1| PREDICTED: uncharacterized protein LOC106435564 [Brassica napus]
          Length = 606

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHVLSNKELLPNLDSS--FCDACHIGKSKHKHYNPSLTATTQPLE 79
           ++WH RLGHP+ ++++H+     ++ N  SS   CDAC +GKS    +  S T T +PLE
Sbjct: 522 EVWHQRLGHPHKDILQHLSRKNAIVSNKTSSKTLCDACQVGKSSRLPFLVSETVTNRPLE 581

Query: 78  IIHSDVWGPSPILSKDGFRFMCI 10
            IH D+W P P++S  GF++  I
Sbjct: 582 RIHCDLWDPCPVMSSQGFQYYVI 604


>ref|XP_013690295.1| PREDICTED: uncharacterized protein LOC106394259 [Brassica napus]
          Length = 2800

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -2

Query: 249 LWHMRLGHPNSNVMKHVLSNKELLPNLDS-SFCDACHIGKSKHKHYNPSLTATTQPLEII 73
           +WH RLGHPN  V+KH+ + K +  N  S S C++C +GK+    ++ S   +++PLE I
Sbjct: 462 VWHKRLGHPNDQVLKHLSTIKAISFNKTSQSMCESCQLGKTCRLPFSSSDFRSSRPLERI 521

Query: 72  HSDVWGPSPILSKDGFRFMCI 10
           H DVWGP+P++S  GFRF  +
Sbjct: 522 HCDVWGPAPVVSTQGFRFYVV 542



 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -2

Query: 249  LWHMRLGHPNSNVMKHVLSNKELLPNLDS-SFCDACHIGKSKHKHYNPSLTATTQPLEII 73
            +WH RLGHPN  V+KH+ + K +  N  S S C++C +GK+    ++ S   +++PLE I
Sbjct: 1851 VWHKRLGHPNDQVLKHLSTIKAISFNKTSQSMCESCQLGKTCRLPFSSSDFRSSRPLERI 1910

Query: 72   HSDVWGPSPILSKDGFRFMCI 10
            H DVWGP+P++S  GFRF  +
Sbjct: 1911 HCDVWGPAPVVSTQGFRFYVV 1931


>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
 Frame = -2

Query: 249 LWHMRLGHPNSNVMKHVLSN----KELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPL 82
           ++H RLGHP+S+V+ HV+      K +  N     CDAC +GK    H++ + T T  PL
Sbjct: 537 VFHQRLGHPSSHVLNHVIKTCSFVKTINGNRTFDSCDACKMGKMHRLHFSVTETKTKFPL 596

Query: 81  EIIHSDVWGPSPILSKDGFRF 19
           EI+H+D+WGPSP++S  G+R+
Sbjct: 597 EILHTDLWGPSPVISPQGYRY 617


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHVLSNKELLPNLDSS-FCDACHIGKSKHKHYNPSLTATTQPLEI 76
           ++WH RLGHPN  V++H++  K ++ N  SS  C+AC +GK     +  S   +++PLE 
Sbjct: 459 EVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSNMCEACQMGKVCRLPFVASEFVSSRPLER 518

Query: 75  IHSDVWGPSPILSKDGFRFMCI 10
           IH D+WGP+P+ S  GF++  I
Sbjct: 519 IHCDLWGPAPVTSAQGFQYYVI 540


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7267767|emb|CAB81170.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1515

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHVLSNKELLPNLDSS-FCDACHIGKSKHKHYNPSLTATTQPLEI 76
           ++WH RLGHPN  V++H++  K ++ N  SS  C+AC +GK     +  S   +++PLE 
Sbjct: 456 EVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSNMCEACQMGKVCRLPFVASEFVSSRPLER 515

Query: 75  IHSDVWGPSPILSKDGFRFMCI 10
           IH D+WGP+P+ S  GF++  I
Sbjct: 516 IHCDLWGPAPVTSAQGFQYYVI 537


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
           putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHVLSNKELLPNLDS-SFCDACHIGKSKHKHYNPSLTATTQPLEI 76
           ++WHMRLGHPN +V++ +L NK ++ +  S S CDAC +GK     +  S   +++ LE 
Sbjct: 425 EVWHMRLGHPNQDVLQQLLRNKAIVISKTSHSLCDACQMGKICKLPFASSDFVSSRLLER 484

Query: 75  IHSDVWGPSPILSKDGFRFMCI 10
           +H D+WGP+P++S  GFR+  I
Sbjct: 485 VHCDLWGPAPVVSSQGFRYYVI 506


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = -2

Query: 246 WHMRLGHPNSNVMKHVLSNK--ELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPLEII 73
           WH RLGHPN +VMKHV  N   +L+ N  S+FC  C +GKS     N S T    P +++
Sbjct: 166 WHSRLGHPNVDVMKHVSRNYNIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLV 225

Query: 72  HSDVWGPSPILSKDGFRF 19
           +SD+WGP+P+ S  G+++
Sbjct: 226 YSDLWGPAPVTSTCGYQY 243


>gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1102

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = -2

Query: 348 TLASPCQPKSSHQGKPGYXXXXXXXXXXXXXFDLWHMRLGHPNSNVMKHVLSNK--ELLP 175
           TL     P+S  Q +P               F  WH RLGHPN +VMKHV  N   +L+ 
Sbjct: 513 TLLPTPSPQSVQQVQPARTFSVNTATKSSISFATWHSRLGHPNVDVMKHVSRNFNIQLVT 572

Query: 174 NLDSSFCDACHIGKSKHKHYNPSLTATTQPLEIIHSDVWGPSPILSKDGFRF 19
           N  S+FC  C +GKS     N S T    P +++++D+WGP+P+ S  G+++
Sbjct: 573 NNKSNFCTPCCLGKSHRLPSNLSKTIYNTPFDLVYNDLWGPAPVTSTCGYQY 624


>gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]
          Length = 1249

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = -2

Query: 249 LWHMRLGHPNSNVMKHVLSNKELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPLEIIH 70
           LWH RL HP++ V  H+    E   N+ +  C+ CH  K     ++ S T + +P EI+H
Sbjct: 442 LWHRRLRHPSNLVQSHLFKTSE---NVMTQDCEVCHFSKQTRLPFDVSSTKSCKPFEIVH 498

Query: 69  SDVWGPSPILSKDGFRF 19
           SDVWGP+P++S DGFR+
Sbjct: 499 SDVWGPAPLVSFDGFRY 515


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1408

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = -2

Query: 246 WHMRLGHPNSNVMKHVLSNK--ELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPLEII 73
           WH RLGHPN +VMKHV  N   +L+ N  S+FC  C +GKS     N S T    P +++
Sbjct: 501 WHSRLGHPNVDVMKHVSRNYNIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLV 560

Query: 72  HSDVWGPSPILSKDGFRF 19
           +SD+WGP+P+ S  G+++
Sbjct: 561 YSDLWGPAPVTSTCGYQY 578


>gb|KYP54595.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 423

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = -2

Query: 246 WHMRLGHPNSNVMKHVLSNK--ELLPNLDSSFCDACHIGKSKHKHYNPSLTATTQPLEII 73
           WH RLGHPN +VMKHV  N   +L+ N  S+FC  C +GKS     N S T    P +++
Sbjct: 281 WHSRLGHPNVDVMKHVSRNFNIQLVNNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLV 340

Query: 72  HSDVWGPSPILSKDGFRF 19
           +SD+WGP+P+ S  G+++
Sbjct: 341 YSDLWGPAPVTSTCGYQY 358


>gb|KYP45977.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 197

 Score = 73.9 bits (180), Expect = 5e-14
 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -2

Query: 246 WHMRLGHPNSNVMKHVLSNKELLP--NLDSSFCDACHIGKSKHKHYNPSLTATTQPLEII 73
           WH RLGHPN++VMK V  N  + P  N    FCD+C + KS   H  PS +  T P E+I
Sbjct: 5   WHSRLGHPNTDVMKLVFRNCNIQPVNNTTPVFCDSCCLRKSHRLHSGPSTSVYTAPFEVI 64

Query: 72  HSDVWGPSPILSKDGFRFMCI 10
            SD+WG + + S  GF++  I
Sbjct: 65  FSDLWGLAFVSSTCGFQYYII 85


>gb|KYP74197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 455

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -2

Query: 249 LWHMRLGHPNSNVMKHVLSNKELLPNL--DSSFCDACHIGKSKHKHYNPSLTATTQPLEI 76
           +WH RLGH  + ++KHVL    +   L  +++ C +C +GK     +  S T  TQPL++
Sbjct: 126 IWHSRLGHCANKIVKHVLKQCNISIPLHDNATMCGSCCLGKMHKSSFPISKTVYTQPLQL 185

Query: 75  IHSDVWGPSPILSKDGFRFMCI 10
           ++SD+WGPSPI SK+G+R+  I
Sbjct: 186 VYSDIWGPSPIPSKEGYRYYII 207


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHVLSNKELLPNLDS-SFCDACHIGKSKHKHYNPSLTATTQPLEI 76
           ++WH RLGHPN ++++ + S K +  N  S S C +C + KS    ++ S    T+PLE 
Sbjct: 463 EVWHQRLGHPNPHILQRLASIKSVFINKRSKSLCVSCQMAKSSRLPFSASQFVATRPLER 522

Query: 75  IHSDVWGPSPILSKDGFRFMCIL 7
           IH DVWGPSP++S   F++  +L
Sbjct: 523 IHCDVWGPSPVVSVQEFKYYVVL 545


>emb|CAN67587.1| hypothetical protein VITISV_036279 [Vitis vinifera]
          Length = 1034

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
 Frame = -2

Query: 249 LWHMRLGHPNSNVMKHVLSNKELLPNLDSSF----CDACHIGKSKHKHYNPSLTATTQPL 82
           +WH RLGHPN+ ++ HVL N +LL N D S     CD+C + KSK  H+    +  +   
Sbjct: 453 VWHRRLGHPNTKILSHVL-NSDLLGNKDRSSLSLKCDSCKLSKSKTLHFPLHTSRASHCF 511

Query: 81  EIIHSDVWGPSPILSKDGFRF 19
           ++IHSDVWGPS + S + F++
Sbjct: 512 DLIHSDVWGPSSVSSHEKFKY 532


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = -2

Query: 252 DLWHMRLGHPNSNVMKHVLSNKELLPNLDS-SFCDACHIGKSKHKHYNPSLTATTQPLEI 76
           ++WH RLGHP+  V++ ++    +  N  S S C+AC +GKS    +  S   + +PLE 
Sbjct: 465 EVWHRRLGHPHPQVLQQLVKTNSISINKTSKSLCEACQLGKSTRLPFVSSSFTSNRPLER 524

Query: 75  IHSDVWGPSPILSKDGFRFMCI 10
           +H D+WGPSPI S  GFR+  +
Sbjct: 525 VHCDLWGPSPITSVQGFRYYAV 546