BLASTX nr result
ID: Rehmannia28_contig00044539
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00044539
(799 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011070702.1| PREDICTED: pentatricopeptide repeat-containi... 53 6e-11
ref|XP_012839592.1| PREDICTED: pentatricopeptide repeat-containi... 46 3e-10
gb|EYU35572.1| hypothetical protein MIMGU_mgv1a018815mg, partial... 46 3e-10
ref|XP_012851881.1| PREDICTED: pentatricopeptide repeat-containi... 46 6e-10
gb|EYU25273.1| hypothetical protein MIMGU_mgv1a024368mg, partial... 46 6e-10
emb|CDP19158.1| unnamed protein product [Coffea canephora] 42 3e-08
ref|XP_004236840.1| PREDICTED: pentatricopeptide repeat-containi... 38 3e-07
ref|XP_006359300.1| PREDICTED: pentatricopeptide repeat-containi... 38 3e-07
ref|XP_015072259.1| PREDICTED: pentatricopeptide repeat-containi... 38 6e-07
gb|KFK25192.1| hypothetical protein AALP_AA8G079200 [Arabis alpina] 40 9e-07
ref|XP_012459841.1| PREDICTED: pentatricopeptide repeat-containi... 37 4e-06
ref|XP_010546246.1| PREDICTED: pentatricopeptide repeat-containi... 36 7e-06
>ref|XP_011070702.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
[Sesamum indicum]
Length = 541
Score = 52.8 bits (125), Expect(3) = 6e-11
Identities = 29/42 (69%), Positives = 29/42 (69%)
Frame = -1
Query: 724 LSFQMLLGCVHGRVFRIGFALTIFIFNSLIRMYGSSSEIVSA 599
LS L GCVHG V R GFA IFI NSLI MYGSS EI SA
Sbjct: 115 LSDPKLGGCVHGLVLRSGFASDIFISNSLIHMYGSSGEIESA 156
Score = 32.0 bits (71), Expect(3) = 6e-11
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 489 WRALVDGYAKNDNYTEVL 436
W ALV+GY K +NYTE L
Sbjct: 202 WSALVEGYVKGENYTEAL 219
Score = 30.0 bits (66), Expect(3) = 6e-11
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3
Query: 593 AMKLFDEMPMRNLISW 546
A K+F EMPM+NL+SW
Sbjct: 156 ARKMFAEMPMKNLVSW 171
>ref|XP_012839592.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
[Erythranthe guttata]
Length = 518
Score = 46.2 bits (108), Expect(3) = 3e-10
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 724 LSFQMLLGCVHGRVFRIGFALTIFIFNSLIRMYGSSSEI 608
+S L CVHGRV R GFA +FI NSL+ MYGS+ ++
Sbjct: 104 ISDPKLGACVHGRVLRNGFASDVFISNSLVHMYGSTGDV 142
Score = 37.4 bits (85), Expect(3) = 3e-10
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 596 CAMKLFDEMPMRNLISW 546
CA K+FDEMPMRNL+SW
Sbjct: 144 CARKVFDEMPMRNLVSW 160
Score = 28.9 bits (63), Expect(3) = 3e-10
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 489 WRALVDGYAKNDNYTEVL 436
W ALVDGY K+ N+ E L
Sbjct: 191 WSALVDGYVKDGNHAEAL 208
>gb|EYU35572.1| hypothetical protein MIMGU_mgv1a018815mg, partial [Erythranthe
guttata]
Length = 511
Score = 46.2 bits (108), Expect(3) = 3e-10
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 724 LSFQMLLGCVHGRVFRIGFALTIFIFNSLIRMYGSSSEI 608
+S L CVHGRV R GFA +FI NSL+ MYGS+ ++
Sbjct: 97 ISDPKLGACVHGRVLRNGFASDVFISNSLVHMYGSTGDV 135
Score = 37.4 bits (85), Expect(3) = 3e-10
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 596 CAMKLFDEMPMRNLISW 546
CA K+FDEMPMRNL+SW
Sbjct: 137 CARKVFDEMPMRNLVSW 153
Score = 28.9 bits (63), Expect(3) = 3e-10
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 489 WRALVDGYAKNDNYTEVL 436
W ALVDGY K+ N+ E L
Sbjct: 184 WSALVDGYVKDGNHAEAL 201
>ref|XP_012851881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like, partial [Erythranthe guttata]
Length = 322
Score = 45.8 bits (107), Expect(3) = 6e-10
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 724 LSFQMLLGCVHGRVFRIGFALTIFIFNSLIRMYGSSSEI 608
+S L CVHG+V R GFA +FI NSL+ MYGS+ E+
Sbjct: 115 ISDPKLGACVHGQVLRNGFASDVFISNSLVHMYGSTGEV 153
Score = 34.3 bits (77), Expect(3) = 6e-10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3
Query: 596 CAMKLFDEMPMRNLISW 546
CA K+FDEM MRNL+SW
Sbjct: 155 CARKVFDEMAMRNLVSW 171
Score = 31.2 bits (69), Expect(3) = 6e-10
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 10/46 (21%)
Frame = -2
Query: 543 MLVGYAKCG----M*F**GTCP------WRALVDGYAKNDNYTEVL 436
ML GYAKCG M P W ALVDGY K+ N+ E L
Sbjct: 174 MLDGYAKCGDVVLMREVFDVMPERDVVSWSALVDGYVKDGNHAEAL 219
>gb|EYU25273.1| hypothetical protein MIMGU_mgv1a024368mg, partial [Erythranthe
guttata]
Length = 294
Score = 45.8 bits (107), Expect(3) = 6e-10
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 724 LSFQMLLGCVHGRVFRIGFALTIFIFNSLIRMYGSSSEI 608
+S L CVHG+V R GFA +FI NSL+ MYGS+ E+
Sbjct: 86 ISDPKLGACVHGQVLRNGFASDVFISNSLVHMYGSTGEV 124
Score = 34.3 bits (77), Expect(3) = 6e-10
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3
Query: 596 CAMKLFDEMPMRNLISW 546
CA K+FDEM MRNL+SW
Sbjct: 126 CARKVFDEMAMRNLVSW 142
Score = 31.2 bits (69), Expect(3) = 6e-10
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 10/46 (21%)
Frame = -2
Query: 543 MLVGYAKCG----M*F**GTCP------WRALVDGYAKNDNYTEVL 436
ML GYAKCG M P W ALVDGY K+ N+ E L
Sbjct: 145 MLDGYAKCGDVVLMREVFDVMPERDVVSWSALVDGYVKDGNHAEAL 190
>emb|CDP19158.1| unnamed protein product [Coffea canephora]
Length = 542
Score = 42.4 bits (98), Expect(3) = 3e-08
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = -1
Query: 724 LSFQMLLGCVHGRVFRIGFALTIFIFNSLIRMYGSSSEIVSA 599
LS L GC+HG + R GF F+ NSLI MYGS + +SA
Sbjct: 129 LSELRLGGCIHGVILRNGFVSDRFVSNSLIHMYGSCGDAMSA 170
Score = 31.6 bits (70), Expect(3) = 3e-08
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 10/51 (19%)
Frame = -2
Query: 543 MLVGYAKCG----M*F**GTCP------WRALVDGYAKNDNYTEVLANENG 421
ML GYAKCG M G P W + VDGY K Y E LA +G
Sbjct: 188 MLDGYAKCGKLDLMKEVFGLMPERDVVSWSSFVDGYVKGGEYMEALAVFDG 238
Score = 31.2 bits (69), Expect(3) = 3e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 593 AMKLFDEMPMRNLISW 546
A KLFDE+P RNL+SW
Sbjct: 170 ARKLFDEIPTRNLVSW 185
>ref|XP_004236840.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
[Solanum lycopersicum] gi|723689806|ref|XP_010319323.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g08305 [Solanum lycopersicum]
Length = 559
Score = 37.7 bits (86), Expect(3) = 3e-07
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Frame = -1
Query: 742 QLYQNFLSFQMLLGC------------VHGRVFRIGFALTIFIFNSLIRMYGSSSEIVSA 599
+++ N+ ++ ++ C VHG V + GF + +++ NSLI MYGS +++ A
Sbjct: 109 EVFPNYFTYPFVVKCLAKLSEVRIGRSVHGGVLKNGFDVDLYVSNSLIHMYGSCGDVLCA 168
Score = 35.8 bits (81), Expect(3) = 3e-07
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3
Query: 596 CAMKLFDEMPMRNLISW 546
CA K+FDEMP+RNL+SW
Sbjct: 167 CARKVFDEMPVRNLVSW 183
Score = 28.5 bits (62), Expect(3) = 3e-07
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 489 WRALVDGYAKNDNYTEVLA 433
W +L+DGY K+ Y E LA
Sbjct: 214 WSSLIDGYVKDGEYAEALA 232
>ref|XP_006359300.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
[Solanum tuberosum] gi|971572077|ref|XP_015169864.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g08305 [Solanum tuberosum]
Length = 559
Score = 37.7 bits (86), Expect(3) = 3e-07
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Frame = -1
Query: 742 QLYQNFLSFQMLLGC------------VHGRVFRIGFALTIFIFNSLIRMYGSSSEIVSA 599
+++ N+ ++ ++ C VHG V + GF + +++ NSLI MYGS +++ A
Sbjct: 109 EVFPNYFTYPFVVKCLAKLCEVRIGRSVHGGVLKNGFDVDLYVSNSLIHMYGSCGDVLCA 168
Score = 34.7 bits (78), Expect(3) = 3e-07
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 596 CAMKLFDEMPMRNLISW 546
CA K+FDEMP++NL+SW
Sbjct: 167 CARKVFDEMPVKNLVSW 183
Score = 29.3 bits (64), Expect(3) = 3e-07
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 10/47 (21%)
Frame = -2
Query: 543 MLVGYAKCG----------M*F**GTCPWRALVDGYAKNDNYTEVLA 433
ML GY KCG W +L+DGY K+ Y E LA
Sbjct: 186 MLDGYGKCGDVVLMREVFDSMIERDVVSWSSLIDGYVKDGEYAEALA 232
>ref|XP_015072259.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
[Solanum pennellii] gi|970021971|ref|XP_015072260.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g08305 [Solanum pennellii]
gi|970021973|ref|XP_015072261.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g08305
[Solanum pennellii]
Length = 559
Score = 37.7 bits (86), Expect(3) = 6e-07
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Frame = -1
Query: 742 QLYQNFLSFQMLLGC------------VHGRVFRIGFALTIFIFNSLIRMYGSSSEIVSA 599
+++ N+ ++ ++ C VHG V + GF + +++ NSLI MYGS +++ A
Sbjct: 109 EVFPNYFTYPFVVKCLAKLCEVRIGRSVHGGVLKNGFDVDLYVSNSLIHMYGSCGDVLCA 168
Score = 34.7 bits (78), Expect(3) = 6e-07
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 596 CAMKLFDEMPMRNLISW 546
CA K+FDEMP++NL+SW
Sbjct: 167 CARKVFDEMPVKNLVSW 183
Score = 28.5 bits (62), Expect(3) = 6e-07
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 489 WRALVDGYAKNDNYTEVLA 433
W +L+DGY K+ Y E LA
Sbjct: 214 WSSLIDGYVKDGEYAEALA 232
>gb|KFK25192.1| hypothetical protein AALP_AA8G079200 [Arabis alpina]
Length = 515
Score = 40.4 bits (93), Expect(3) = 9e-07
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1
Query: 703 GCVHGRVFRIGFALTIFIFNSLIRMYGSSSEIVSA 599
GC+H V + GF +FI NSLI MYGS + VSA
Sbjct: 108 GCLHSGVLKTGFEWDLFICNSLIHMYGSFRDRVSA 142
Score = 31.2 bits (69), Expect(3) = 9e-07
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3
Query: 593 AMKLFDEMPMRNLISW 546
A KLFDEMP++NL++W
Sbjct: 142 ARKLFDEMPVKNLVTW 157
Score = 28.5 bits (62), Expect(3) = 9e-07
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
Frame = -2
Query: 543 MLVGYAKCGM*F**----------GTCPWRALVDGYAKNDNYTEVL 436
+L GYAKCG F W ++VDGY K+ Y E L
Sbjct: 160 VLDGYAKCGDVFSARQVFDGMAERDVVSWSSMVDGYVKSGEYEEAL 205
>ref|XP_012459841.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
[Gossypium raimondii] gi|763810460|gb|KJB77362.1|
hypothetical protein B456_012G134100 [Gossypium
raimondii]
Length = 525
Score = 37.0 bits (84), Expect(3) = 4e-06
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -1
Query: 703 GCVHGRVFRIGFALTIFIFNSLIRMYGSSSEIVSA 599
G +HG + GF L FI NSLI MY S +IV A
Sbjct: 122 GAIHGHALKNGFQLDKFINNSLIHMYSSCHDIVYA 156
Score = 30.8 bits (68), Expect(3) = 4e-06
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -3
Query: 593 AMKLFDEMPMRNLISW 546
A ++FDEMPM+N++SW
Sbjct: 156 ARRVFDEMPMKNIVSW 171
Score = 30.0 bits (66), Expect(3) = 4e-06
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 10/47 (21%)
Frame = -2
Query: 543 MLVGYAKCG----------M*F**GTCPWRALVDGYAKNDNYTEVLA 433
ML GYAKCG + W L+DGY KN ++ E LA
Sbjct: 174 MLDGYAKCGDMASARQVFDLMPQRDVVSWSCLIDGYVKNGDHKEALA 220
>ref|XP_010546246.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
[Tarenaya hassleriana]
Length = 544
Score = 36.2 bits (82), Expect(3) = 7e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1
Query: 703 GCVHGRVFRIGFALTIFIFNSLIRMYGSSSEIVS 602
G +HG V + G +F+ NSLI MYGS +I S
Sbjct: 134 GSIHGAVAKTGLEWDLFVCNSLIHMYGSFRDIAS 167
Score = 31.2 bits (69), Expect(3) = 7e-06
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 10/46 (21%)
Frame = -2
Query: 543 MLVGYAKCG----------M*F**GTCPWRALVDGYAKNDNYTEVL 436
ML GYAKCG W ++VDGY K+D+Y E L
Sbjct: 186 MLDGYAKCGDIVSARQVFDEMLERDVVSWSSMVDGYVKSDDYDEAL 231
Score = 29.6 bits (65), Expect(3) = 7e-06
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3
Query: 587 KLFDEMPMRNLISW 546
KLF+EMP++NL+SW
Sbjct: 170 KLFEEMPVKNLVSW 183