BLASTX nr result

ID: Rehmannia28_contig00044425 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00044425
         (331 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   2e-07
ref|XP_011470584.1| PREDICTED: uncharacterized protein LOC105353...    57   3e-07
ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353...    57   3e-07
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438...    53   6e-06

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 28/86 (32%), Positives = 46/86 (53%)
 Frame = -3

Query: 260 LMPFVAPRNIVFPSTMLYADDIVILCAATFVNARHIFDTLGHYASLSS*VFNPAKSKVFF 81
           L+P    R + FP+ +LYADD++I C  T  N R +      Y+ +S  + N AKS+ F 
Sbjct: 676 LIPMSYCRGVSFPTHILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFT 735

Query: 80  GTRVSQHIRNRIQTVMGLSIGSFPTT 3
                  ++  I +++G ++GS P T
Sbjct: 736 SAMTGSRVQ-MISSLLGFNVGSLPFT 760


>ref|XP_011470584.1| PREDICTED: uncharacterized protein LOC105353269 [Fragaria vesca
           subsp. vesca]
          Length = 938

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 33/93 (35%), Positives = 47/93 (50%)
 Frame = -3

Query: 287 ISHLVSSHLLMPFVAPRNIVFPSTMLYADDIVILCAATFVNARHIFDTLGHYASLSS*VF 108
           IS LVSS  L    +PRN + PS +L+ADD+++       N   I      Y  +S  V 
Sbjct: 507 ISLLVSSGQLQRISSPRNTLAPSHVLFADDVIVFFRGNRRNLSRIMRFFDEYGRVSGQVI 566

Query: 107 NPAKSKVFFGTRVSQHIRNRIQTVMGLSIGSFP 9
           N  KS+VF G  +    R+ I   +G+ +GS P
Sbjct: 567 NKGKSQVFIGNSIHSR-RHSISNFLGIPLGSAP 598


>ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353242 [Fragaria vesca
           subsp. vesca]
          Length = 1179

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 35/95 (36%), Positives = 51/95 (53%)
 Frame = -3

Query: 287 ISHLVSSHLLMPFVAPRNIVFPSTMLYADDIVILCAATFVNARHIFDTLGHYASLSS*VF 108
           IS+L++S  L P  +PR    PS  L+ADDI++ C     +   I D LG Y   S  V 
Sbjct: 633 ISYLMNSGQLHPISSPRGTRAPSHSLFADDIIVFCRGDRRSLAVIMDFLGEYGVNSGQVI 692

Query: 107 NPAKSKVFFGTRVSQHIRNRIQTVMGLSIGSFPTT 3
           N AKS+VF    +S +  + I  ++G+  G+ P T
Sbjct: 693 NKAKSQVFMSKHLS-YRHHLIVDLLGILAGTAPFT 726


>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
          Length = 1384

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 30/93 (32%), Positives = 46/93 (49%)
 Frame = -3

Query: 287 ISHLVSSHLLMPFVAPRNIVFPSTMLYADDIVILCAATFVNARHIFDTLGHYASLSS*VF 108
           +S L    L  P  APR  + PS +LYADD+ I C +  V  R++      Y+  S    
Sbjct: 664 LSRLQLDGLTKPTFAPRGCISPSHVLYADDLFIFCRSDGVTXRNLQGFFDRYSRASGQFI 723

Query: 107 NPAKSKVFFGTRVSQHIRNRIQTVMGLSIGSFP 9
           N AKS  + G+  S+H +  +++ +G   G  P
Sbjct: 724 NKAKSTFYLGS-TSRHRKXVVESYLGFKEGKXP 755


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