BLASTX nr result
ID: Rehmannia28_contig00044399
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00044399
(595 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086416.1| PREDICTED: pentatricopeptide repeat-containi... 293 2e-93
ref|XP_012847512.1| PREDICTED: pentatricopeptide repeat-containi... 269 2e-84
ref|XP_012847511.1| PREDICTED: pentatricopeptide repeat-containi... 269 3e-84
gb|EEF42215.1| pentatricopeptide repeat-containing protein, puta... 191 5e-57
gb|KNA09713.1| hypothetical protein SOVF_151120 [Spinacia oleracea] 192 1e-54
ref|XP_015575272.1| PREDICTED: pentatricopeptide repeat-containi... 191 2e-54
ref|XP_015076649.1| PREDICTED: pentatricopeptide repeat-containi... 190 5e-54
emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera] 188 1e-53
ref|XP_006357242.1| PREDICTED: pentatricopeptide repeat-containi... 188 2e-53
ref|XP_004238748.1| PREDICTED: pentatricopeptide repeat-containi... 188 2e-53
emb|CBI32034.3| unnamed protein product [Vitis vinifera] 187 3e-53
ref|XP_002269101.2| PREDICTED: pentatricopeptide repeat-containi... 187 4e-53
ref|XP_010683293.1| PREDICTED: pentatricopeptide repeat-containi... 187 4e-53
ref|XP_012092455.1| PREDICTED: pentatricopeptide repeat-containi... 186 2e-52
ref|XP_007044394.1| Tetratricopeptide repeat (TPR)-like superfam... 185 4e-52
ref|XP_012458935.1| PREDICTED: pentatricopeptide repeat-containi... 184 9e-52
ref|XP_015894857.1| PREDICTED: pentatricopeptide repeat-containi... 184 1e-51
gb|KVI05590.1| Pentatricopeptide repeat-containing protein [Cyna... 181 2e-51
ref|XP_009594031.1| PREDICTED: pentatricopeptide repeat-containi... 183 2e-51
emb|CDP00269.1| unnamed protein product [Coffea canephora] 182 3e-51
>ref|XP_011086416.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Sesamum indicum]
Length = 607
Score = 293 bits (749), Expect = 2e-93
Identities = 144/175 (82%), Positives = 153/175 (87%)
Frame = +3
Query: 66 MATVLVTAPPPELSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPET 245
MA VLVT PP E STA+R HH R+ +ILT+S TVSIPHLKQIH QILRT PA + SPET
Sbjct: 1 MAAVLVTGPPVEFSTASRRRHHDRLLHILTESDTVSIPHLKQIHGQILRTAPAPNDSPET 60
Query: 246 VFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLK 425
+FLYSRL+HFSSLQDL YTLQLF QIP PNTFIYNT+IRAYAHSKD KKQAF LFQELL
Sbjct: 61 IFLYSRLLHFSSLQDLAYTLQLFGQIPNPNTFIYNTVIRAYAHSKDRKKQAFPLFQELLN 120
Query: 426 QESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
Q+SLLPDKHTFPFVLKACAYLFALSEGKQTHA VLKHG GSDVY NNSLIHFYAS
Sbjct: 121 QDSLLPDKHTFPFVLKACAYLFALSEGKQTHAQVLKHGLGSDVYANNSLIHFYAS 175
Score = 55.8 bits (133), Expect = 7e-06
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Frame = +3
Query: 186 KQIHAQILRTGPAIHHSPETVFLYSRLMHF-SSLQDLIYTLQLFNQIPFPNTFIYNTLIR 362
KQ HAQ+L+ H V+ + L+HF +S D ++F ++P + +N +I
Sbjct: 148 KQTHAQVLK-----HGLGSDVYANNSLIHFYASCGDSENAKKVFGKMPERSLVSWNVIID 202
Query: 363 AYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKH-- 536
A + +A +F E+ + S PD +T V+ ACA L ALS G HA+VL+
Sbjct: 203 ALVQMGEFD-EALRIFVEM--KSSFDPDGYTVQSVIDACAGLGALSMGMWAHAYVLRKCE 259
Query: 537 -GFGSDVYVNNSLIHFY 584
DV V NSLI Y
Sbjct: 260 IDANFDVLVKNSLIEMY 276
>ref|XP_012847512.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial isoform X2 [Erythranthe guttata]
Length = 593
Score = 269 bits (688), Expect = 2e-84
Identities = 131/177 (74%), Positives = 151/177 (85%), Gaps = 2/177 (1%)
Frame = +3
Query: 66 MATVLVTAPPP-ELSTAT-RHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSP 239
MATV TAPPP E+ST+ RHHH RI +ILT S VS+P LKQIHAQILRT PA H +
Sbjct: 1 MATVSATAPPPAEVSTSPPRHHHRRRILHILTHSPIVSVPQLKQIHAQILRTAPAPHPTS 60
Query: 240 ETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQEL 419
ET FLY+RL+H+SSL+DL+YTL++F+QIP PNTF YNTLIRAYAHSKDHKK+AF +F++L
Sbjct: 61 ETAFLYTRLLHYSSLKDLVYTLRIFSQIPDPNTFAYNTLIRAYAHSKDHKKEAFSIFRQL 120
Query: 420 LKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
L QE L P+K+TFPFVLKACAYLFAL EGKQ HAHVLKHGFGS+VY NNSLIHFYAS
Sbjct: 121 LNQEGLFPEKYTFPFVLKACAYLFALDEGKQAHAHVLKHGFGSNVYANNSLIHFYAS 177
>ref|XP_012847511.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial isoform X1 [Erythranthe guttata]
Length = 611
Score = 269 bits (688), Expect = 3e-84
Identities = 131/177 (74%), Positives = 151/177 (85%), Gaps = 2/177 (1%)
Frame = +3
Query: 66 MATVLVTAPPP-ELSTAT-RHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSP 239
MATV TAPPP E+ST+ RHHH RI +ILT S VS+P LKQIHAQILRT PA H +
Sbjct: 1 MATVSATAPPPAEVSTSPPRHHHRRRILHILTHSPIVSVPQLKQIHAQILRTAPAPHPTS 60
Query: 240 ETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQEL 419
ET FLY+RL+H+SSL+DL+YTL++F+QIP PNTF YNTLIRAYAHSKDHKK+AF +F++L
Sbjct: 61 ETAFLYTRLLHYSSLKDLVYTLRIFSQIPDPNTFAYNTLIRAYAHSKDHKKEAFSIFRQL 120
Query: 420 LKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
L QE L P+K+TFPFVLKACAYLFAL EGKQ HAHVLKHGFGS+VY NNSLIHFYAS
Sbjct: 121 LNQEGLFPEKYTFPFVLKACAYLFALDEGKQAHAHVLKHGFGSNVYANNSLIHFYAS 177
>gb|EEF42215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 330
Score = 191 bits (485), Expect = 5e-57
Identities = 95/180 (52%), Positives = 130/180 (72%), Gaps = 5/180 (2%)
Frame = +3
Query: 66 MATVLVTAPPPELSTATR-----HHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIH 230
MA ++ +PP + T+++ + HH + L +S LKQIHAQ LR+ +
Sbjct: 3 MAMAIIQSPPLRILTSSKPNNSLNQHHAHLLGYLNDCKDMS--QLKQIHAQALRS--TLP 58
Query: 231 HSPETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLF 410
SP ++FLYS+++HFSS DL Y +LF++ PN F++NTLIRA A S D K+Q+FLL+
Sbjct: 59 DSPHSLFLYSKILHFSSFNDLDYAYRLFSKFDNPNAFMWNTLIRACARSYDRKEQSFLLY 118
Query: 411 QELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
+ +++Q ++LPDKHT+PFVLKACAYLFAL+EGKQ HA +LKHGF SDVY+NNSLIHFYAS
Sbjct: 119 KRMIEQGAVLPDKHTYPFVLKACAYLFALNEGKQVHAQMLKHGFESDVYINNSLIHFYAS 178
>gb|KNA09713.1| hypothetical protein SOVF_151120 [Spinacia oleracea]
Length = 613
Score = 192 bits (487), Expect = 1e-54
Identities = 101/180 (56%), Positives = 127/180 (70%), Gaps = 5/180 (2%)
Frame = +3
Query: 66 MATVLVTAPPP-ELSTA----TRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIH 230
M T PPP LS++ T +HH H + ++L Q + S+ LKQIHAQ LRT P H
Sbjct: 1 MLIASTTIPPPYPLSSSAPPTTTNHHAHHLLSLLNQCS--SMTELKQIHAQTLRTTPT-H 57
Query: 231 HSPETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLF 410
H FLYSR++HF+S ++ Y+L++F+QI PN+FI+NTLIRA A S HKK AF L+
Sbjct: 58 HPKHLHFLYSRILHFTSSTNIHYSLKIFSQIQDPNSFIWNTLIRACASSNSHKKLAFQLY 117
Query: 411 QELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
++L + ++PDKHTFPFVLKACAYLF GKQ HAH +K GFGSDVYVNNSLIHFYAS
Sbjct: 118 HDMLNEGFVIPDKHTFPFVLKACAYLFDEFAGKQAHAHAVKLGFGSDVYVNNSLIHFYAS 177
Score = 56.6 bits (135), Expect = 4e-06
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Frame = +3
Query: 186 KQIHAQILRTGPAIHHSPETVFLYSRLMHF-SSLQDLIYTLQLFNQIPFPNTFIYNTLIR 362
KQ HA ++ G V++ + L+HF +S L ++F+++P + +N +I
Sbjct: 150 KQAHAHAVKLGFG-----SDVYVNNSLIHFYASCGYLDCAQKVFDEMPERSVVSWNAIID 204
Query: 363 AYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGF 542
A S++ A LF+E+ Q PD +T ++ ACA L ALS G HA+VL+
Sbjct: 205 ALVRSREFDT-ALRLFREM--QGWFEPDGYTLQSIISACAGLGALSLGVWAHAYVLRVRD 261
Query: 543 G---SDVYVNNSLIHFY 584
G +DV +NNSL+ Y
Sbjct: 262 GKLVTDVLMNNSLVEMY 278
>ref|XP_015575272.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
chloroplastic/mitochondrial [Ricinus communis]
Length = 610
Score = 191 bits (485), Expect = 2e-54
Identities = 95/180 (52%), Positives = 130/180 (72%), Gaps = 5/180 (2%)
Frame = +3
Query: 66 MATVLVTAPPPELSTATR-----HHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIH 230
MA ++ +PP + T+++ + HH + L +S LKQIHAQ LR+ +
Sbjct: 3 MAMAIIQSPPLRILTSSKPNNSLNQHHAHLLGYLNDCKDMS--QLKQIHAQALRS--TLP 58
Query: 231 HSPETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLF 410
SP ++FLYS+++HFSS DL Y +LF++ PN F++NTLIRA A S D K+Q+FLL+
Sbjct: 59 DSPHSLFLYSKILHFSSFNDLDYAYRLFSKFDNPNAFMWNTLIRACARSYDRKEQSFLLY 118
Query: 411 QELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
+ +++Q ++LPDKHT+PFVLKACAYLFAL+EGKQ HA +LKHGF SDVY+NNSLIHFYAS
Sbjct: 119 KRMIEQGAVLPDKHTYPFVLKACAYLFALNEGKQVHAQMLKHGFESDVYINNSLIHFYAS 178
>ref|XP_015076649.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
chloroplastic/mitochondrial [Solanum pennellii]
Length = 602
Score = 190 bits (482), Expect = 5e-54
Identities = 98/163 (60%), Positives = 120/163 (73%)
Frame = +3
Query: 102 LSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPETVFLYSRLMHFSS 281
++T T H H I ILTQ T++S LKQ+HA LRT P H P+ +FLYSR++HF+S
Sbjct: 16 INTNTSEHRRH-ILQILTQCTSIS--QLKQVHAYTLRTTPLDH--PDALFLYSRILHFAS 70
Query: 282 LQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFP 461
+ DL Y+ +LF + PNTFI+NTLIR AHS D K +AF+LFQ ++ ES+ PDKHTFP
Sbjct: 71 MNDLDYSFKLFGNLENPNTFIWNTLIRGCAHSNDRKGEAFMLFQRMV--ESVEPDKHTFP 128
Query: 462 FVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
FVLK CAYLFALSEGKQ H LK GF SDVYVNNSL+HFY+S
Sbjct: 129 FVLKGCAYLFALSEGKQAHGVALKLGFDSDVYVNNSLVHFYSS 171
>emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 188 bits (478), Expect = 1e-53
Identities = 97/179 (54%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
Frame = +3
Query: 66 MATVLVTAPPPEL----STATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHH 233
M VTAPP L S + HH R+ L T +S LKQ+HAQ +RT + H
Sbjct: 1 MVXAAVTAPPSHLPHAISNSDSXTHHRRLLLFLNSCTCMS--QLKQLHAQTIRTTSS--H 56
Query: 234 SPETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQ 413
P T FLYSR++HFSSL DL Y ++F+QI PN+F++N LIRA A S D K+ A L+
Sbjct: 57 HPNTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYH 116
Query: 414 ELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
+L+Q S++ DKHTFPFVLKACAYLFALSEG+Q HA +LK GF S+VY+NNSL+HFYA+
Sbjct: 117 RMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSBVYINNSLVHFYAT 175
>ref|XP_006357242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
chloroplastic/mitochondrial [Solanum tuberosum]
Length = 602
Score = 188 bits (478), Expect = 2e-53
Identities = 98/163 (60%), Positives = 120/163 (73%)
Frame = +3
Query: 102 LSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPETVFLYSRLMHFSS 281
++T T H H I ILTQ T++S LKQ+HA LRT P H P+ +FLYSR++HF+S
Sbjct: 16 INTNTSEHRRH-ILQILTQCTSIS--QLKQVHAYTLRTTPLDH--PDALFLYSRILHFAS 70
Query: 282 LQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFP 461
+ DL Y+ +LF + PN+FI+NTLIR AHS D K +AFLLFQ ++K S+ PDKHTFP
Sbjct: 71 MNDLDYSFKLFGNLENPNSFIWNTLIRGCAHSNDRKGEAFLLFQRMVK--SVEPDKHTFP 128
Query: 462 FVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
FVLK CAYLFALSEGKQ H +K GF SDVYVNNSLIHFY+S
Sbjct: 129 FVLKGCAYLFALSEGKQAHGVAVKLGFDSDVYVNNSLIHFYSS 171
>ref|XP_004238748.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Solanum lycopersicum]
Length = 602
Score = 188 bits (478), Expect = 2e-53
Identities = 97/163 (59%), Positives = 120/163 (73%)
Frame = +3
Query: 102 LSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPETVFLYSRLMHFSS 281
++T T H H I ILTQ T++S LKQ+HA LRT P H P+ +FLYSR++HF+S
Sbjct: 16 INTNTSEHRRH-ILQILTQCTSIS--QLKQVHAYTLRTTPLDH--PDALFLYSRILHFAS 70
Query: 282 LQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFP 461
+ DL Y+ +LF + PN+FI+NTLIR AHS D K +AF+LFQ ++ ES+ PDKHTFP
Sbjct: 71 MNDLDYSFKLFGNLENPNSFIWNTLIRGCAHSNDRKGEAFMLFQRMV--ESVEPDKHTFP 128
Query: 462 FVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
FVLK CAYLFALSEGKQ H LK GF SDVYVNNSL+HFY+S
Sbjct: 129 FVLKGCAYLFALSEGKQAHGVALKLGFDSDVYVNNSLVHFYSS 171
>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 187 bits (476), Expect = 3e-53
Identities = 97/179 (54%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
Frame = +3
Query: 66 MATVLVTAPPPEL----STATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHH 233
M V APP L S + HH R+ L T +S LKQ+HAQ +RT + H
Sbjct: 1 MVLAAVIAPPSHLPHAISNSDSFTHHRRLLLFLNSCTCIS--QLKQLHAQTIRTTSS--H 56
Query: 234 SPETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQ 413
P T FLYSR++HFSSL DL Y ++F+QI PN+F++N LIRA A S D K+ A L+
Sbjct: 57 HPNTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYH 116
Query: 414 ELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
+L+Q S++ DKHTFPFVLKACAYLFALSEG+Q HA +LK GF SDVY+NNSL+HFYA+
Sbjct: 117 RMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYAT 175
>ref|XP_002269101.2| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Vitis vinifera]
Length = 609
Score = 187 bits (476), Expect = 4e-53
Identities = 97/179 (54%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
Frame = +3
Query: 66 MATVLVTAPPPEL----STATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHH 233
M V APP L S + HH R+ L T +S LKQ+HAQ +RT + H
Sbjct: 3 MVLAAVIAPPSHLPHAISNSDSFTHHRRLLLFLNSCTCIS--QLKQLHAQTIRTTSS--H 58
Query: 234 SPETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQ 413
P T FLYSR++HFSSL DL Y ++F+QI PN+F++N LIRA A S D K+ A L+
Sbjct: 59 HPNTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYH 118
Query: 414 ELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
+L+Q S++ DKHTFPFVLKACAYLFALSEG+Q HA +LK GF SDVY+NNSL+HFYA+
Sbjct: 119 RMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYAT 177
>ref|XP_010683293.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Beta vulgaris subsp. vulgaris]
gi|870855428|gb|KMT07161.1| hypothetical protein
BVRB_6g154870 [Beta vulgaris subsp. vulgaris]
Length = 612
Score = 187 bits (476), Expect = 4e-53
Identities = 95/163 (58%), Positives = 118/163 (72%)
Frame = +3
Query: 102 LSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPETVFLYSRLMHFSS 281
++TAT +H+H + ++L + S+ LKQIHAQILRT P+ HH FLYSRL+HF+S
Sbjct: 20 ITTATNNHNHAHLLSLLNHCS--SMTELKQIHAQILRTTPS-HHPKHLHFLYSRLLHFTS 76
Query: 282 LQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFP 461
D+ Y+L+LF+ I PN+FI+NTLIRA A S HK F L+ +L + S+ PDKHTFP
Sbjct: 77 SSDIHYSLKLFSHIQHPNSFIWNTLIRACAQSHTHKNLGFQLYYHMLSEGSVNPDKHTFP 136
Query: 462 FVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
FVLKACAYLF GKQ HAHV K GF +DVYVNNSLIHFYAS
Sbjct: 137 FVLKACAYLFDEFAGKQAHAHVFKFGFDADVYVNNSLIHFYAS 179
Score = 61.6 bits (148), Expect = 7e-08
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Frame = +3
Query: 186 KQIHAQILRTGPAIHHSPETVFLYSRLMHF-SSLQDLIYTLQLFNQIPFPNTFIYNTLIR 362
KQ HA + + G V++ + L+HF +S L Q+F+++P + +NT+I
Sbjct: 152 KQAHAHVFKFG-----FDADVYVNNSLIHFYASCGFLDCARQVFDEMPERSLVSWNTIID 206
Query: 363 AYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLK--- 533
S ++ A LF+E+ Q S PD +T ++ ACA L ALS G HA+VL+
Sbjct: 207 GLVQSGEYD-MALRLFREM--QGSFEPDGYTLQSIISACAGLGALSLGIWAHAYVLRACD 263
Query: 534 HGFGSDVYVNNSLIHFY 584
G+DV +NN+L+ Y
Sbjct: 264 AKLGADVLLNNALVEMY 280
>ref|XP_012092455.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Jatropha curcas]
gi|643704182|gb|KDP21246.1| hypothetical protein
JCGZ_21717 [Jatropha curcas]
Length = 604
Score = 186 bits (471), Expect = 2e-52
Identities = 97/176 (55%), Positives = 127/176 (72%), Gaps = 1/176 (0%)
Frame = +3
Query: 66 MATVLVTAPPPE-LSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPE 242
MA+ ++ +P P LS + H + + L + +S LKQIHAQ LR+ + P+
Sbjct: 1 MASAIIPSPSPIILSKPNSANQHCHLLSCLNECRDMS--RLKQIHAQTLRS--TLPDQPD 56
Query: 243 TVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELL 422
T+F+YSR++HFS+ DL Y ++F+ I PN+F++NTLIRA A S D K AFLL++ +L
Sbjct: 57 TLFVYSRILHFSAFNDLDYAYRVFDGIENPNSFMWNTLIRACARSSDSKAAAFLLYRRML 116
Query: 423 KQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
+QE++LPDKHTFPFVLKACAYLFAL EGKQ HA +LK GF SDVYVNNSLIHFYAS
Sbjct: 117 EQETVLPDKHTFPFVLKACAYLFALYEGKQAHAQMLKLGFESDVYVNNSLIHFYAS 172
Score = 58.2 bits (139), Expect = 1e-06
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Frame = +3
Query: 186 KQIHAQILRTGPAIHHSPETVFLYSRLMHFSSLQDLIYTLQ-LFNQIPFPNTFIYNTLIR 362
KQ HAQ+L+ G V++ + L+HF + + + Q +F+++P + +N +I
Sbjct: 145 KQAHAQMLKLG-----FESDVYVNNSLIHFYASCGCLESAQNVFDKMPKRSVVSWNAMID 199
Query: 363 AYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKH-- 536
A + + A LF +L Q+ PD +T VL ACA L ALS G HA+VL++
Sbjct: 200 ALVQFGEFET-ALKLFVQL--QDLFEPDWYTMQSVLNACAGLCALSLGMWAHAYVLRNFD 256
Query: 537 -GFGSDVYVNNSLIHFY 584
+DV VNN L+ Y
Sbjct: 257 VDVANDVLVNNCLLDMY 273
>ref|XP_007044394.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508708329|gb|EOY00226.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 611
Score = 185 bits (469), Expect = 4e-52
Identities = 103/181 (56%), Positives = 124/181 (68%), Gaps = 10/181 (5%)
Frame = +3
Query: 78 LVTAP--PPEL--------STATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAI 227
L TAP PP+L A+ HH RI L Q T +S LKQIHAQ LR+ A
Sbjct: 3 LATAPSSPPQLLPSKTINTQNASSFDHHGRILLALKQCTNMS--SLKQIHAQTLRS--AS 58
Query: 228 HHSPETVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLL 407
H P+T+ LYS+++ SS D Y L LFNQ+ PN+F++NTLIRA A + ++K+QA L
Sbjct: 59 PHHPKTLLLYSQILLLSSSLDFNYALLLFNQVENPNSFMWNTLIRACALNVNNKEQAIRL 118
Query: 408 FQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYA 587
+QE+L+Q + PDKHTFPFVLK CAYLFA SEGKQ HAH LKH FGSDVYVNNSLIH YA
Sbjct: 119 YQEMLEQALVFPDKHTFPFVLKGCAYLFAFSEGKQVHAHALKHRFGSDVYVNNSLIHLYA 178
Query: 588 S 590
S
Sbjct: 179 S 179
>ref|XP_012458935.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Gossypium raimondii]
gi|763810224|gb|KJB77126.1| hypothetical protein
B456_012G121600 [Gossypium raimondii]
Length = 611
Score = 184 bits (467), Expect = 9e-52
Identities = 97/154 (62%), Positives = 113/154 (73%)
Frame = +3
Query: 129 HHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPETVFLYSRLMHFSSLQDLIYTLQ 308
H RI L Q T +S LKQIHA LR+ H P+T FLYS+L+HFSS D Y LQ
Sbjct: 30 HSRILISLKQCTHIS--QLKQIHALTLRSTSPYH--PKTFFLYSQLLHFSSFLDFNYALQ 85
Query: 309 LFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYL 488
LFNQI PN+F++NTLIRA A+ ++K QA L+ E+L+Q + PDKHTFPFVLK CAYL
Sbjct: 86 LFNQIQNPNSFMWNTLIRACANDVNNKDQAMRLYLEMLEQALVSPDKHTFPFVLKGCAYL 145
Query: 489 FALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
F +SEG Q HAH LKHGFGSDVYVNNSLIHFYAS
Sbjct: 146 FDVSEGIQVHAHALKHGFGSDVYVNNSLIHFYAS 179
>ref|XP_015894857.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
chloroplastic/mitochondrial [Ziziphus jujuba]
Length = 609
Score = 184 bits (466), Expect = 1e-51
Identities = 92/176 (52%), Positives = 128/176 (72%), Gaps = 4/176 (2%)
Frame = +3
Query: 75 VLVTAPPPELSTATR----HHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPE 242
++ + PPP +S A + HH R+ + + +S LKQIHAQ LRT + ++P
Sbjct: 5 IMQSQPPPVISIANNGGDSYIHHSRLPQFINECKNMS--QLKQIHAQTLRT-LSTTNNPH 61
Query: 243 TVFLYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELL 422
+FL+SR++HFSSL DL Y ++F+QI PN+F++N+LIRA A S + K+QA +L+ +L
Sbjct: 62 AIFLHSRILHFSSLADLDYAFRVFDQIKDPNSFMWNSLIRACARSVERKEQAMVLYHRML 121
Query: 423 KQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
+ ++LPDK+TFPFVL+ACAYLFA SEGKQ H+H+LK GFG DVY+NNSLIHFYAS
Sbjct: 122 VEGTVLPDKYTFPFVLRACAYLFAFSEGKQAHSHILKLGFGFDVYINNSLIHFYAS 177
>gb|KVI05590.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 508
Score = 181 bits (460), Expect = 2e-51
Identities = 94/180 (52%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Frame = +3
Query: 75 VLVTAPPPELSTATRHH-------HHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHH 233
VL TA P ++TA ++ HH R+ ++L Q T++S HLKQIHA LRT H
Sbjct: 2 VLATASFPTVATAVDYNNSVQTTNHHRRLLHLLNQCTSMS--HLKQIHAHTLRTTCTTH- 58
Query: 234 SPETVFLYSRLMHFSSLQDLIYTLQLFN-QIPFPNTFIYNTLIRAYAHSKDHKKQAFLLF 410
P T+FL+SR++HFSSL DL Y F I N+F +NT+IRA + S + K++A LL+
Sbjct: 59 -PHTLFLHSRILHFSSLHDLHYAFLFFQTHIDNANSFAWNTIIRACSRSSNRKQEAILLY 117
Query: 411 QELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
++L + +++PDKHTFPFVLKACAYLFA+SEG+Q H+H+ K GF SDVY+NNSLIHFY S
Sbjct: 118 LKMLSEGNVIPDKHTFPFVLKACAYLFAISEGRQLHSHIFKLGFASDVYINNSLIHFYGS 177
>ref|XP_009594031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Nicotiana tomentosiformis]
Length = 599
Score = 183 bits (464), Expect = 2e-51
Identities = 98/173 (56%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
Frame = +3
Query: 75 VLVTAP-PPELSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPETVF 251
+L T P P L T H I ILTQ T++S LKQ+HA LRT +P+T+F
Sbjct: 2 ILATTPRPTTLPINTTSEHRRHILQILTQCTSIS--QLKQVHAYTLRTTTL--DNPDTLF 57
Query: 252 LYSRLMHFSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQE 431
LYSR++HF+SL DL Y+ QLF + N+FI+NTLIRA AHS K +AFLLF +++
Sbjct: 58 LYSRILHFASLHDLNYSFQLFCNLENTNSFIWNTLIRACAHSNSRKDEAFLLFYKMVT-- 115
Query: 432 SLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
++ PDKHTFPFVLKACAYLFALS+GKQ H LK GF SDVY+NNSLIHFY+S
Sbjct: 116 NVEPDKHTFPFVLKACAYLFALSQGKQAHGFALKLGFDSDVYINNSLIHFYSS 168
>emb|CDP00269.1| unnamed protein product [Coffea canephora]
Length = 609
Score = 182 bits (463), Expect = 3e-51
Identities = 94/166 (56%), Positives = 121/166 (72%)
Frame = +3
Query: 93 PPELSTATRHHHHHRIFNILTQSTTVSIPHLKQIHAQILRTGPAIHHSPETVFLYSRLMH 272
P LS ++ H + ++LTQ TTVS LKQIHA LRT P P+ L+ +++
Sbjct: 19 PTILSVSSPAH----LLHLLTQCTTVS--QLKQIHAHALRTTPP-QSDPDISRLFKKILQ 71
Query: 273 FSSLQDLIYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKH 452
FSSL DL YT+ +F ++P ++F +NTLIRA+AHS DHK+QA +LF ++L +E++ PDK+
Sbjct: 72 FSSLHDLRYTINVFKRLPDRDSFTWNTLIRAHAHSADHKEQAIMLFYQMLNEENVSPDKY 131
Query: 453 TFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYAS 590
TFPFVLKACAYLFAL EG Q H VLK GFGSDVY+NNSLIHFYAS
Sbjct: 132 TFPFVLKACAYLFALFEGAQVHGQVLKRGFGSDVYINNSLIHFYAS 177