BLASTX nr result
ID: Rehmannia28_contig00044293
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00044293
(410 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430... 57 1e-12
ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353... 59 4e-12
gb|KYP67014.1| Putative ribonuclease H protein At1g65750 family ... 52 6e-11
gb|KYP67083.1| Transposon TX1 uncharacterized [Cajanus cajan] 52 6e-11
ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307... 50 7e-11
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 67 2e-10
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 42 5e-10
gb|KYP32875.1| Putative ribonuclease H protein At1g65750 family,... 51 1e-09
gb|EEF39443.1| conserved hypothetical protein [Ricinus communis] 48 6e-09
ref|XP_002522932.2| PREDICTED: uncharacterized protein LOC828288... 48 6e-09
gb|KYP63478.1| Putative ribonuclease H protein At1g65750 family ... 54 6e-09
ref|XP_011470584.1| PREDICTED: uncharacterized protein LOC105353... 57 7e-09
ref|XP_004309966.2| PREDICTED: uncharacterized protein LOC101295... 62 8e-09
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 40 2e-08
ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein A... 49 2e-08
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat... 50 2e-08
gb|KYP54681.1| Putative ribonuclease H protein At1g65750 family,... 45 2e-08
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438... 48 3e-08
ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein A... 48 3e-08
ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein A... 47 6e-08
>ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430323 [Malus domestica]
Length = 1380
Score = 57.4 bits (137), Expect(3) = 1e-12
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRN---WFSSSIWKGM 339
GLG+R L +N + WD L S SL +F +RF L P RN + SS W G+
Sbjct: 860 GLGLRDLAXLNLTALLSFGWDALQSYSLWGSFAXQRF---PLSPYRNQNIYLRSSXWHGL 916
Query: 340 RTHYSNLHADSVWIIGDGHGVSF 408
+ L+ +S WIIGDG VSF
Sbjct: 917 KRALPILNNNSRWIIGDGRXVSF 939
Score = 32.3 bits (72), Expect(3) = 1e-12
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWG 178
F+W+GD++ L+TV W V +EGG G
Sbjct: 833 FIWSGDLSSRKLVTVDWSMVXGPKKEGGLG 862
Score = 29.3 bits (64), Expect(3) = 1e-12
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 21 VHSMFIYQWPVSLVKSLNKCIRNLFGQGILQS 116
+HS +YQ P +K L+ C RN G L S
Sbjct: 810 LHSFSVYQLPSCXLKHLSACARNFIWSGDLSS 841
>ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353242 [Fragaria vesca
subsp. vesca]
Length = 1179
Score = 58.9 bits (141), Expect(3) = 4e-12
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG++ L +N + ++ W+I SS S NFLR RF+ + RR++ +SSIW G++
Sbjct: 829 GLGLKQLGVLNRSLLLKKAWEIYSSTSNGCNFLRNRFWRNGV-LRRSYATSSIWPGIKRF 887
Query: 349 YSNLHADSVWIIGDGHGVSF 408
+ + + W++G V+F
Sbjct: 888 WQQVIDNGCWLLGSNSQVAF 907
Score = 30.0 bits (66), Expect(3) = 4e-12
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
V+ V+S IY+WPV+L++ L RN G
Sbjct: 773 VMASMVVYSFQIYEWPVTLLRRLEVWCRNFLWSG 806
Score = 28.1 bits (61), Expect(3) = 4e-12
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWGFALL 190
F+W+G I K + V W C +EGG G L
Sbjct: 802 FLWSGSIDKRGVPLVAWKTCCAPMDEGGLGLKQL 835
>gb|KYP67014.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 630
Score = 51.6 bits (122), Expect(3) = 6e-11
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG+RSL +NNA+ ++L W+ + +S A+ L + + S + + +S+IW +R
Sbjct: 401 GLGVRSLMDINNAYMLKLCWNFVKKDSNWASMLASKVYKRSGDV-IYYLASTIWASIRDM 459
Query: 349 YSNLHADSVWIIGDGHGVSF 408
YS + +S W IG G V+F
Sbjct: 460 YSIVKDNSTWKIGIGKKVNF 479
Score = 30.8 bits (68), Expect(3) = 6e-11
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
V+ +H+ +Y+WP+SL+K + RN G
Sbjct: 345 VLQNMLIHNFQVYKWPLSLLKLIESWFRNFIWSG 378
Score = 30.8 bits (68), Expect(3) = 6e-11
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWG 178
F+W+G I + L TV W VC +EGG G
Sbjct: 374 FIWSGPIYQSKLTTVHWHIVCSNFDEGGLG 403
>gb|KYP67083.1| Transposon TX1 uncharacterized [Cajanus cajan]
Length = 593
Score = 51.6 bits (122), Expect(3) = 6e-11
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG+RSL +NNA+ ++L W+ + +S A+ L + + S + + +S+IW +R
Sbjct: 433 GLGVRSLMDINNAYMLKLCWNFVKKDSNWASMLASKVYKRSGDV-IYYLASTIWASIRDM 491
Query: 349 YSNLHADSVWIIGDGHGVSF 408
YS + +S W IG G V+F
Sbjct: 492 YSIVKDNSTWKIGIGKKVNF 511
Score = 30.8 bits (68), Expect(3) = 6e-11
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
V+ +H+ +Y+WP+SL+K + RN G
Sbjct: 377 VLQNMLIHNFQVYKWPLSLLKLIESWFRNFIWSG 410
Score = 30.8 bits (68), Expect(3) = 6e-11
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWG 178
F+W+G I + L TV W VC +EGG G
Sbjct: 406 FIWSGPIYQSKLTTVHWHIVCSNFDEGGLG 435
>ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307646 [Fragaria vesca
subsp. vesca]
Length = 796
Score = 50.4 bits (119), Expect(3) = 7e-11
Identities = 22/73 (30%), Positives = 43/73 (58%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG++ L+ +N++ ++ W+I +S+ F+R RF RR++ SSIW G+R
Sbjct: 357 GLGLKKLDVLNSSLLLKRCWEIFTSSFEGCCFIRNRF-----SKRRSYAPSSIWPGVRKF 411
Query: 349 YSNLHADSVWIIG 387
+ + ++ W++G
Sbjct: 412 WGLVQNNTRWLVG 424
Score = 31.6 bits (70), Expect(3) = 7e-11
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +3
Query: 6 ILGSAVHSMFIY-----QWPVSLVKSLNKCIRNLFGQG 104
++ S ++SMF+Y +WPVSL++ + + RN G
Sbjct: 297 LIKSVIYSMFVYTFQVYEWPVSLLRKVERWCRNFLWSG 334
Score = 30.8 bits (68), Expect(3) = 7e-11
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWGFALL 190
F+W+GDI K + V W C +EGG G L
Sbjct: 330 FLWSGDIDKRGIPLVSWTSCCAPIDEGGLGLKKL 363
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 67.0 bits (162), Expect = 2e-10
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GL I+S +NNA ++L W++LSSNS A L+ RFF +P R + SS+W G++ H
Sbjct: 789 GLDIKSTRLINNAAMLKLAWNLLSSNSQWAVLLKRRFFSQG-QPIRYFVKSSVWHGVKNH 847
Query: 349 YSNLHADSVWIIGDGHGVS 405
S L + +WI+G G ++
Sbjct: 848 MSILRQNKLWIVGTGDRIN 866
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 41.6 bits (96), Expect(3) = 5e-10
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWG 178
F+W+GD+TK ++TV W ++C EEGG G
Sbjct: 571 FIWSGDVTKRKMVTVAWRKICADYEEGGLG 600
Score = 35.4 bits (80), Expect(3) = 5e-10
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
V+ VH+M IY WP+ ++K + K I+N G
Sbjct: 542 VVQSMLVHTMSIYSWPIKILKEMEKWIKNFIWSG 575
Score = 33.1 bits (74), Expect(3) = 5e-10
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLR 270
GLG++SL +N A +++ W+++ S+ AN +R
Sbjct: 598 GLGVKSLICLNEATNLKICWNLMQSDEQWANIIR 631
>gb|KYP32875.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 278
Score = 51.2 bits (121), Expect(3) = 1e-09
Identities = 28/80 (35%), Positives = 41/80 (51%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
G+GI+SL +NNA+ ++L W L + A R F ++ S IW +R
Sbjct: 116 GVGIKSLTEINNAYMVKLCWHFLKKDKDWAYVFASRVFFLINGNVAHYLVSIIWASIRDM 175
Query: 349 YSNLHADSVWIIGDGHGVSF 408
YS + S WIIG+G V+F
Sbjct: 176 YSYVKIHSSWIIGNGKKVNF 195
Score = 29.6 bits (65), Expect(3) = 1e-09
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWGFALL 190
F+W G I T+PW VC +EGG G L
Sbjct: 89 FIWKGSILYSKPNTIPWHTVCSDVDEGGVGIKSL 122
Score = 28.1 bits (61), Expect(3) = 1e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
V+ +H+ +Y+WP+SL+K + N +G
Sbjct: 60 VLQSLLLHNFQVYKWPMSLLKMIKSWFMNFIWKG 93
>gb|EEF39443.1| conserved hypothetical protein [Ricinus communis]
Length = 303
Score = 48.1 bits (113), Expect(2) = 6e-09
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
G+G++ L+ +N R+ W S++S FLR R+ S PR SS +W +R
Sbjct: 239 GIGLKRLDVLNRTMLCRIAWKFYSNDSFVYRFLRSRYLVASGVPR----SSLVWPSIREL 294
Query: 349 YSNLHADS 372
YS L A S
Sbjct: 295 YSKLQATS 302
Score = 38.9 bits (89), Expect(2) = 6e-09
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
VI S +H+ +Y+WP SL+KS+ K IRN G
Sbjct: 183 VIFASLLHTFMMYRWPSSLLKSIEKAIRNFLWTG 216
>ref|XP_002522932.2| PREDICTED: uncharacterized protein LOC8282881 [Ricinus communis]
Length = 250
Score = 48.1 bits (113), Expect(2) = 6e-09
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
G+G++ L+ +N R+ W S++S FLR R+ S PR SS +W +R
Sbjct: 186 GIGLKRLDVLNRTMLCRIAWKFYSNDSFVYRFLRSRYLVASGVPR----SSLVWPSIREL 241
Query: 349 YSNLHADS 372
YS L A S
Sbjct: 242 YSKLQATS 249
Score = 38.9 bits (89), Expect(2) = 6e-09
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
VI S +H+ +Y+WP SL+KS+ K IRN G
Sbjct: 130 VIFASLLHTFMMYRWPSSLLKSIEKAIRNFLWTG 163
>gb|KYP63478.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 204
Score = 53.5 bits (127), Expect(2) = 6e-09
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLGIRSL +NN + ++L W+ N+ A+ L R + + + +S+IW +R
Sbjct: 66 GLGIRSLIEINNVYMLKLCWNFFKGNTDWASVLGNRVVKKNGTVAQ-YLTSTIWASIRDM 124
Query: 349 YSNLHADSVWIIGDGHGVSF 408
YS + S WIIG+G V+F
Sbjct: 125 YSTVKTHSSWIIGNGKKVNF 144
Score = 33.5 bits (75), Expect(2) = 6e-09
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRN-LFGQGILQSN 119
V+ +HS +Y+WP+SL+K + RN ++ + IL SN
Sbjct: 10 VLQSMLIHSFQVYKWPISLLKLIEFWFRNFIWTESILHSN 49
>ref|XP_011470584.1| PREDICTED: uncharacterized protein LOC105353269 [Fragaria vesca
subsp. vesca]
Length = 938
Score = 57.4 bits (137), Expect(2) = 7e-09
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG++ L +N + ++ W+I ++ S F+R RF R+++ SSIW G+R
Sbjct: 703 GLGLKQLVLLNRSLLLKRCWEIYTAQSEGCAFIRNRF-----SRRKSYAPSSIWPGVRQF 757
Query: 349 YSNLHADSVWIIGDGHGVSF 408
+ + +S W IG G+G+ F
Sbjct: 758 WKTVQDNSQWFIGSGNGIYF 777
Score = 29.3 bits (64), Expect(2) = 7e-09
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
VI V+ +Y+WPVS+V+ + RN G
Sbjct: 647 VIFSMLVYIFQVYEWPVSVVRKIEVWCRNFLWSG 680
>ref|XP_004309966.2| PREDICTED: uncharacterized protein LOC101295881 [Fragaria vesca
subsp. vesca]
Length = 325
Score = 62.0 bits (149), Expect = 8e-09
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG+++ +N AF ++ WDIL+S+S+A+ F R RF +P + SSIW G R
Sbjct: 27 GLGLKNFPILNRAFLLKKFWDILTSSSMASTFFRRRFLNKFGQPCTYYKRSSIWPGFRPL 86
Query: 349 YSNLHADSVWIIGDGHGVSF 408
+ ++ S WIIG + F
Sbjct: 87 FQDILDGSQWIIGSDTTLDF 106
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 40.0 bits (92), Expect(3) = 2e-08
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWGFALL 190
F+W+GDITK L+TV W ++C +GG G L
Sbjct: 477 FIWSGDITKRKLVTVAWKKLCKPQSQGGLGIRSL 510
Score = 32.7 bits (73), Expect(3) = 2e-08
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 21 VHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
+H++ IY WP L+K L C RN G
Sbjct: 454 IHTITIYDWPSFLLKELETCFRNFIWSG 481
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSS 243
GLGIRSL +N A ++L WD+L S
Sbjct: 504 GLGIRSLSQLNAAGNLKLCWDMLHS 528
>ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG+R L ++N ++L W I++++S + +LRERF ++ SSIW G+++
Sbjct: 67 GLGLRDLGSLNXTALLKLGWLIITTDSPXSIYLRERFKLHGRLYSCSYKRSSIWPGIKSI 126
Query: 349 YSNLHADSVWIIGDGHGVS 405
L + W+IG+G S
Sbjct: 127 LHILFQNCRWVIGNGSTTS 145
Score = 36.6 bits (83), Expect(2) = 2e-08
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 21 VHSMFIYQWPVSLVKSLNKCIRNLFGQGILQSNDSL 128
+HS +Y+WP SL++ L++C RN G + S S+
Sbjct: 17 LHSFSVYKWPSSLLRPLSRCARNFIWSGDVTSKKSV 52
>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
Length = 480
Score = 50.1 bits (118), Expect(3) = 2e-08
Identities = 23/79 (29%), Positives = 44/79 (55%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GL I+ +N + + L W +++S A + RF P +++F SS+W G++ H
Sbjct: 326 GLDIKPTCLINESLILLLAWQFSTADSQWAALMHHRFLKHGT-PLQHYFLSSMWGGIKEH 384
Query: 349 YSNLHADSVWIIGDGHGVS 405
S + ++S+WI+G G ++
Sbjct: 385 LSTISSNSIWIVGTGANIN 403
Score = 28.9 bits (63), Expect(3) = 2e-08
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRNLFGQG 104
+I G V+S IY WP L+ L+ I+N G
Sbjct: 270 IIHGMLVYSFQIYMWPRRLLHQLDSWIKNFIWSG 303
Score = 25.4 bits (54), Expect(3) = 2e-08
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGG 172
F+W+GDI + TV W +C GG
Sbjct: 299 FIWSGDIYTHKVCTVSWKVMCRPWAAGG 326
>gb|KYP54681.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 124
Score = 45.1 bits (105), Expect(3) = 2e-08
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIW 330
GLG+ S+ +N A T++L W+ L +N FLR RF + P + SSS+W
Sbjct: 59 GLGVTSISTLNKATTLKLNWNFLHTNEQWVTFLRARFLSNKV-PMVGYESSSVW 111
Score = 30.8 bits (68), Expect(3) = 2e-08
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 3 VILGSAVHSMFIYQWPVSLVKSLNKCIRN 89
V+L ++S +IY WP +VK + + IRN
Sbjct: 3 VLLPMLLYSFYIYSWPKVVVKHMERLIRN 31
Score = 28.5 bits (62), Expect(3) = 2e-08
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 89 FVWTGDITK**LITVPWLRVCMTNEEGGWG 178
F+W+ D ++T+ W +C EGG G
Sbjct: 32 FIWSRDANSPKIVTIAWKIICRPCSEGGLG 61
>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
Length = 1384
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG+R L ++N +++ W I++++S + +LRERF ++ SSIW G+++
Sbjct: 860 GLGLRDLGSLNTTXLLKJGWLIITTDSPWSIYLRERFKLHGRLYSCSYKXSSIWPGIKSI 919
Query: 349 YSNLHADSVWIIGDGHGVS 405
L + W+IG+G S
Sbjct: 920 LHILFQNCRWVIGNGSTTS 938
Score = 36.6 bits (83), Expect(2) = 3e-08
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 21 VHSMFIYQWPVSLVKSLNKCIRNLFGQGILQSNDSL 128
+HS +Y+WP SL++ L++C RN G + S S+
Sbjct: 810 LHSFSVYKWPSSLLRPLSRCARNFIWSGDVTSKKSV 845
>ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 1048
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG+R L ++N ++L W I++++S + +LRERF ++ SSIW G+++
Sbjct: 524 GLGLRDLGSLNTTALLKLGWLIITTDSPWSIYLRERFKLHGRLYSCSYKRSSIWPGIKSI 583
Query: 349 YSNLHADSVWIIGDGHGVS 405
L + W+IG+G S
Sbjct: 584 LHILFQNCRWVIGNGSTTS 602
Score = 36.6 bits (83), Expect(2) = 3e-08
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 21 VHSMFIYQWPVSLVKSLNKCIRNLFGQGILQSNDSL 128
+HS +Y+WP SL++ L++C RN G + S S+
Sbjct: 474 LHSFSVYKWPSSLLRPLSRCARNFIWSGDVTSKKSV 509
>ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 46.6 bits (109), Expect(2) = 6e-08
Identities = 24/79 (30%), Positives = 45/79 (56%)
Frame = +1
Query: 169 GLGIRSLEAMNNAFTMRLTWDILSSNSLAANFLRERFFCTSLEPRRNWFSSSIWKGMRTH 348
GLG+R L ++N ++L W I++++S + ++R+RF ++ SSIW G+++
Sbjct: 67 GLGLRDLGSLNXTALLKLGWLIITTDSPWSIYIRKRFKLHGRLYSCSYMRSSIWPGIKSI 126
Query: 349 YSNLHADSVWIIGDGHGVS 405
L + W+IG+G S
Sbjct: 127 LHILFQNCRWVIGNGSTTS 145
Score = 37.0 bits (84), Expect(2) = 6e-08
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 21 VHSMFIYQWPVSLVKSLNKCIRNLFGQGILQS 116
+HS +Y+WP SL++SL++C RN G + S
Sbjct: 17 LHSFSVYKWPSSLLRSLSRCARNFIWSGDVTS 48