BLASTX nr result
ID: Rehmannia28_contig00043264
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00043264
(394 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77977.1| hypothetical protein VITISV_010463 [Vitis vinifera] 211 5e-68
ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975... 226 3e-66
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera] 221 1e-65
gb|KYP59836.1| Retrovirus-related Pol polyprotein from transposo... 204 7e-64
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 216 1e-62
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449... 215 1e-62
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 214 2e-62
ref|XP_008351447.1| PREDICTED: dynamin-related protein 4C-like [... 212 7e-62
ref|XP_009379511.1| PREDICTED: uncharacterized protein LOC103967... 204 1e-61
gb|KMQ72766.1| hypothetical protein BPMI_02479c [Candidatus Burk... 195 2e-61
gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposo... 204 3e-60
gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-... 201 4e-60
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 207 1e-59
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 207 1e-59
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16... 207 1e-59
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-... 203 2e-59
gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposo... 204 4e-59
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc... 203 4e-59
gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 205 6e-59
gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposo... 204 7e-59
>emb|CAN77977.1| hypothetical protein VITISV_010463 [Vitis vinifera]
Length = 167
Score = 211 bits (536), Expect = 5e-68
Identities = 97/131 (74%), Positives = 111/131 (84%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
VNLP G+KP+GCKWI K+K + +GTIDKYKA LVAKG++QKEG DFFDTYSPVTRI SIR
Sbjct: 29 VNLPPGNKPIGCKWIFKRKLQTNGTIDKYKAHLVAKGYRQKEGLDFFDTYSPVTRITSIR 88
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L A A+H EIHQMDVK FLNG++D EIYMEQP+GFV QEKKVC+LI+SLYGLKQ
Sbjct: 89 MLIATTAIHNFEIHQMDVKITFLNGDLDEEIYMEQPKGFVVKEQEKKVCRLIKSLYGLKQ 148
Query: 361 APKQWHLKFDN 393
APKQWH KFD+
Sbjct: 149 APKQWHEKFDH 159
>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe
guttata]
Length = 1203
Score = 226 bits (575), Expect = 3e-66
Identities = 105/130 (80%), Positives = 116/130 (89%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G+KPLGCKWILK+KYKADG+IDKYK RLV KGF+QKEG DFFDTYSPVTRI SIR
Sbjct: 104 VDLPPGNKPLGCKWILKRKYKADGSIDKYKVRLVVKGFRQKEGLDFFDTYSPVTRITSIR 163
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L AIAALH LE+HQMDVKT FLNGE++ EIYMEQP+G VA GQE KVCKL++SLYGLKQ
Sbjct: 164 VLLAIAALHNLEVHQMDVKTTFLNGELEEEIYMEQPKGIVAHGQESKVCKLVKSLYGLKQ 223
Query: 361 APKQWHLKFD 390
APKQWH KFD
Sbjct: 224 APKQWHEKFD 233
>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 221 bits (564), Expect = 1e-65
Identities = 107/130 (82%), Positives = 113/130 (86%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G+K LGCKWI KKK K DGTIDKYKARLVAKGFKQKE DFFDTYSPVTRI SIR
Sbjct: 514 VDLPPGNKHLGCKWIFKKKMKPDGTIDKYKARLVAKGFKQKESLDFFDTYSPVTRITSIR 573
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L AI ALH LEIHQMDVKT FLNGE++ +IYMEQPEGFVA GQEKKVC LI+SLYGLKQ
Sbjct: 574 VLIAIVALHNLEIHQMDVKTTFLNGELEEKIYMEQPEGFVALGQEKKVCNLIKSLYGLKQ 633
Query: 361 APKQWHLKFD 390
APKQWH KFD
Sbjct: 634 APKQWHEKFD 643
>gb|KYP59836.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 290
Score = 204 bits (520), Expect = 7e-64
Identities = 93/130 (71%), Positives = 111/130 (85%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KP+GCKWI K+KY DG+I+KYKARLVAKGF QK+ DFFDT++PV RI+SIR
Sbjct: 65 VDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSIR 124
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L A+A++H+L IHQMDVKTAFLNGE++ EIYM QPEG PGQE KVC+L++SLYGLKQ
Sbjct: 125 VLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLKQ 184
Query: 361 APKQWHLKFD 390
APKQWH KFD
Sbjct: 185 APKQWHEKFD 194
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 216 bits (549), Expect = 1e-62
Identities = 102/131 (77%), Positives = 113/131 (86%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KPL KWI K+K K DG+IDKYKARLV KG++Q EG D+FDTYSPVTRI SIR
Sbjct: 800 VBLPLGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIR 859
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
+ AIAAL LEIHQMDVKTAFLNG++D EIYMEQPEGF APGQEKKVCKL++SLYGLKQ
Sbjct: 860 MVLAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQ 919
Query: 361 APKQWHLKFDN 393
APKQWH KFDN
Sbjct: 920 APKQWHEKFDN 930
>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
Length = 2699
Score = 215 bits (548), Expect = 1e-62
Identities = 101/131 (77%), Positives = 115/131 (87%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KP+G KWI KKK KADGTIDK+KARLVAKG++QKEG D+FDTYSPV+RI SIR
Sbjct: 2278 VDLPLGSKPIGHKWIFKKKLKADGTIDKFKARLVAKGYRQKEGLDYFDTYSPVSRITSIR 2337
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L AIAA++ +IHQMDVKTAFLNGE+D EIYMEQPEGFV GQE KVCKL++SLYGLKQ
Sbjct: 2338 TLIAIAAVYNFDIHQMDVKTAFLNGELDEEIYMEQPEGFVLKGQESKVCKLVKSLYGLKQ 2397
Query: 361 APKQWHLKFDN 393
APKQWH KFD+
Sbjct: 2398 APKQWHEKFDH 2408
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 214 bits (546), Expect = 2e-62
Identities = 102/131 (77%), Positives = 113/131 (86%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KPL KWI K+K K DG+IDKYKARLV KG++Q EG D+FDTYSPVTRI SIR
Sbjct: 632 VDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIR 691
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
+ AIAAL LEIHQMDVKTAFLNG++D EIYMEQPEGF APGQEKKVCKL++SLYGLKQ
Sbjct: 692 MVLAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQ 751
Query: 361 APKQWHLKFDN 393
APKQWH KFDN
Sbjct: 752 APKQWHEKFDN 762
>ref|XP_008351447.1| PREDICTED: dynamin-related protein 4C-like [Malus domestica]
Length = 872
Score = 212 bits (539), Expect = 7e-62
Identities = 100/131 (76%), Positives = 112/131 (85%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
VNLP G+KP+G KWI K+K + DGTI KYKARLVAKG++QKEG D+FDTYS V RI SIR
Sbjct: 26 VNLPPGNKPIGHKWIFKRKLRPDGTIAKYKARLVAKGYRQKEGLDYFDTYSXVARITSIR 85
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L AI + H LEIHQMDVKTAFLNGE+D EIYMEQPEGF+ GQEKKVCKLI+SLYGLKQ
Sbjct: 86 LLIAIXSXHNLEIHQMDVKTAFLNGELDXEIYMEQPEGFIVKGQEKKVCKLIKSLYGLKQ 145
Query: 361 APKQWHLKFDN 393
APKQWH KFD+
Sbjct: 146 APKQWHEKFDH 156
>ref|XP_009379511.1| PREDICTED: uncharacterized protein LOC103967909 [Pyrus x
bretschneideri]
Length = 488
Score = 204 bits (520), Expect = 1e-61
Identities = 95/131 (72%), Positives = 111/131 (84%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
VNLP +KP+G KWI K+K + DGTIDKYKARLVAKG++QK+G D+FDTYSP+ RI IR
Sbjct: 351 VNLPPENKPIGHKWIFKRKLRPDGTIDKYKARLVAKGYRQKDGLDYFDTYSPMARITPIR 410
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L AIA ++ LEIHQMD KTAFLNGE+D EIYM+QPE F+ GQEKKVCKLI+SLYGLKQ
Sbjct: 411 LLIAIAFVYNLEIHQMDAKTAFLNGELDEEIYMDQPEDFIVKGQEKKVCKLIKSLYGLKQ 470
Query: 361 APKQWHLKFDN 393
APKQWH KFD+
Sbjct: 471 APKQWHEKFDH 481
>gb|KMQ72766.1| hypothetical protein BPMI_02479c [Candidatus Burkholderia pumila]
Length = 185
Score = 195 bits (495), Expect = 2e-61
Identities = 91/131 (69%), Positives = 109/131 (83%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP KPLG KW+ +KK K DG++DKYKARLV KG+ QKE D+FDTYS +RI SIR
Sbjct: 21 VDLPLSCKPLGSKWVFRKKLKPDGSVDKYKARLVIKGYSQKESLDYFDTYSSESRINSIR 80
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
+ AIAAL L+IHQ+DVKT FLNG++D +IYMEQPEGFVAPG EKKVCKL++SLYGLKQ
Sbjct: 81 LVVAIAALKNLKIHQIDVKTIFLNGDLDEKIYMEQPEGFVAPGTEKKVCKLVKSLYGLKQ 140
Query: 361 APKQWHLKFDN 393
APK+WH KFD+
Sbjct: 141 APKKWHEKFDH 151
>gb|KYP36589.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 655
Score = 204 bits (520), Expect = 3e-60
Identities = 93/130 (71%), Positives = 111/130 (85%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KP+GCKWI K+KY DG+I+KYKARLVAKGF QK+ DFFDT++PV RI+SIR
Sbjct: 205 VDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSIR 264
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L A+A++H+L IHQMDVKTAFLNGE++ EIYM QPEG PGQE KVC+L++SLYGLKQ
Sbjct: 265 VLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLKQ 324
Query: 361 APKQWHLKFD 390
APKQWH KFD
Sbjct: 325 APKQWHEKFD 334
>gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549030|gb|ABA91827.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 527
Score = 201 bits (512), Expect = 4e-60
Identities = 92/127 (72%), Positives = 107/127 (84%)
Frame = +1
Query: 10 PAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIRALF 189
P G KP+GCKW+ KKK + DGTI+KYKARLVAKG+ QKEG DFFDTYSPV R+ +IR L
Sbjct: 124 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 183
Query: 190 AIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQAPK 369
++AA H L +HQMDVKT FLNGE+D EIYM+QP+GFV GQE KVCKL++SLYGLKQAPK
Sbjct: 184 SLAASHGLLVHQMDVKTTFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 243
Query: 370 QWHLKFD 390
QWH KFD
Sbjct: 244 QWHEKFD 250
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 207 bits (526), Expect = 1e-59
Identities = 91/131 (69%), Positives = 111/131 (84%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KP+GCKW+ ++KY DG I +KARLVAKGFKQ+EG D+FDTY+PV R SIR
Sbjct: 629 VDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTSIR 688
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
LFA+A++H L +HQMDVKTAFLNG+++ E+YMEQPEGFV PG E KVCKL++SLYGLKQ
Sbjct: 689 ILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLPGNENKVCKLVKSLYGLKQ 748
Query: 361 APKQWHLKFDN 393
APKQWH KFD+
Sbjct: 749 APKQWHEKFDH 759
>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 207 bits (526), Expect = 1e-59
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+ P G +P+GCKWI KKK + DGTI++YKARLVAKG+ QKEG DFFDTYSPV R+ +IR
Sbjct: 842 VDRPYGCQPIGCKWIFKKKLRPDGTIERYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 901
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L A+AA + L IHQMDVKTAFLNGE+D EIYM+QPEGF+A GQE KVC+LI+SLYGLKQ
Sbjct: 902 TLIAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLIKSLYGLKQ 961
Query: 361 APKQWHLKFDN 393
APKQWH KFDN
Sbjct: 962 APKQWHEKFDN 972
>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
gag/pol protein [Zea mays]
Length = 1279
Score = 207 bits (526), Expect = 1e-59
Identities = 96/131 (73%), Positives = 112/131 (85%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+ P G +P+GCKWI KKK + DGTI++YKARLVAKG+ QKEG DFFDTYSPV R+ +IR
Sbjct: 802 VDRPYGCQPIGCKWIFKKKLRPDGTIERYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 861
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L A+AA + L IHQMDVKTAFLNGE+D EIYM+QPEGF+A GQE KVC+LI+SLYGLKQ
Sbjct: 862 TLIAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLIKSLYGLKQ 921
Query: 361 APKQWHLKFDN 393
APKQWH KFDN
Sbjct: 922 APKQWHEKFDN 932
>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 713
Score = 203 bits (516), Expect = 2e-59
Identities = 93/127 (73%), Positives = 108/127 (85%)
Frame = +1
Query: 10 PAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIRALF 189
P G KP+GCKW+ KKK + DGTI+KYKARLVAKG+ QKEG DFFDTYSPV R+ +IR L
Sbjct: 222 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 281
Query: 190 AIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQAPK 369
++AA H L +HQMDVKTAFLNGE+D EIYM+QP+GFV GQE KVCKL++SLYGLKQAPK
Sbjct: 282 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 341
Query: 370 QWHLKFD 390
QWH KFD
Sbjct: 342 QWHEKFD 348
>gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 900
Score = 204 bits (520), Expect = 4e-59
Identities = 93/130 (71%), Positives = 111/130 (85%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KP+GCKWI K+KY DG+I+KYKARLVAKGF QK+ DFFDT++PV RI+SIR
Sbjct: 414 VDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSIR 473
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L A+A++H+L IHQMDVKTAFLNGE++ EIYM QPEG PGQE KVC+L++SLYGLKQ
Sbjct: 474 VLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLKQ 533
Query: 361 APKQWHLKFD 390
APKQWH KFD
Sbjct: 534 APKQWHEKFD 543
>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 764
Score = 203 bits (516), Expect = 4e-59
Identities = 93/127 (73%), Positives = 108/127 (85%)
Frame = +1
Query: 10 PAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIRALF 189
P G KP+GCKW+ KKK + DGTI+KYKARLVAKG+ QKEG DFFDTYSPV R+ +IR L
Sbjct: 253 PYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 312
Query: 190 AIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQAPK 369
++AA H L +HQMDVKTAFLNGE+D EIYM+QP+GFV GQE KVCKL++SLYGLKQAPK
Sbjct: 313 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 372
Query: 370 QWHLKFD 390
QWH KFD
Sbjct: 373 QWHEKFD 379
>gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
gi|108709997|gb|ABF97792.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1177
Score = 205 bits (521), Expect = 6e-59
Identities = 93/127 (73%), Positives = 109/127 (85%)
Frame = +1
Query: 10 PAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIRALF 189
P G+KP+GCKW+ KKK + DGTI+KYKARLVAKG+ QKEG DFFDTYSPV R+ +IR L
Sbjct: 754 PYGYKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLL 813
Query: 190 AIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQAPK 369
++AA H L +HQMDVKTAFLNGE+D EIYM+QP+GFV GQE KVCKL++SLYGLKQAPK
Sbjct: 814 SLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPK 873
Query: 370 QWHLKFD 390
QWH KFD
Sbjct: 874 QWHEKFD 880
>gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1012
Score = 204 bits (520), Expect = 7e-59
Identities = 93/130 (71%), Positives = 111/130 (85%)
Frame = +1
Query: 1 VNLPAGHKPLGCKWILKKKYKADGTIDKYKARLVAKGFKQKEGYDFFDTYSPVTRIASIR 180
V+LP G KP+GCKWI K+KY DG+I+KYKARLVAKGF QK+ DFFDT++PV RI+SIR
Sbjct: 526 VDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSIR 585
Query: 181 ALFAIAALHKLEIHQMDVKTAFLNGEIDAEIYMEQPEGFVAPGQEKKVCKLIRSLYGLKQ 360
L A+A++H+L IHQMDVKTAFLNGE++ EIYM QPEG PGQE KVC+L++SLYGLKQ
Sbjct: 586 VLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLKQ 645
Query: 361 APKQWHLKFD 390
APKQWH KFD
Sbjct: 646 APKQWHEKFD 655